BAC Information

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BAC

Clone NameB6Ng01-174E07
Chromosome16 (Build37)
Map Location 93,280,282 - 93,461,088
singlet/doubletdoublet
Overlap geneLOC100040747
Upstream geneKcne2, 1190017O12Rik, 4930563D23Rik, Kcne1, Dscr1, 2410124H12Rik, Clic6, Runx1, EG666023
Downstream geneSetd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2, Morc3, Chaf1b, Cldn14, Sim2, Hlcs
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174E07.bB6Ng01-174E07.g
ACCGA002393GA002394
length882490
definitionB6Ng01-174E07.b B6Ng01-174E07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,280,282 - 93,281,159)(93,460,594 - 93,461,088)
sequence
gaattctgggatagagccaagtgcgatgaaattggcccaggaaaatgtga
ggagacagatgcatggtatctgaacataggtaaccagccatgtggcagaa
cataggttaaaatacatgggttaactaaattatgattctagtcagagtag
agcctagctgtttggccaagttacttataaatatattttgagtctgagtc
ttatttctgggagcacagggctgggaggcagaaccaggcacaacttcaac
actcacctcataatgacccattagaagcagtacataggcacagccctttt
ctgtccatcataggatttgccaggtcactaatggatgttcttttcctcct
actgatatagttgaggactactcttctgaatcccaagggagctaggtgtg
ggactgtcctaaacagccatgacaaggcaacctggaggacactggggctg
tgtcctcttcagaggacaccatggttggtgcagactgaatgttcaggacc
tccagaagcagaagctacagacagcagggagtctgcagtgtcctgcagct
agatgctgcttcctcgtgacactgggaaagtgtttaaagcagaaactatc
cctaatgtcagtcctaccagtctcccagagaggcactgttcaactgacac
tggctcctcaaagcaaagagacacagggaagcaactgacaggtgtttaat
caaagagttgatgtctagccctaacattgcagcttaatttgaagggaaaa
caaacataagggaaaaaagccttgctgggcatggtggcatatgcctttag
ccccagcattcagaaggcagatctctgtgagtcaaggccaacctggtcta
cattagcaaatttcggggcctgtcagggctac
tctgaaaccttgtgtccaaagacatcttccgtctggagccttttatctgg
gtattttatcatagccatgggaagttgactgacacactgagactgtgact
ttaatctggaaatagggtctcacaggcggccagcctccggagagggatct
cagggtgaggtcatggtgggtttagcaggagacttaactccgctggctgg
tgtcctcataagggaaaagacaggggatttgaggtggatgcacaatggag
acattgatgtaaagatgcaggcagagaatggaatgctgctgccaatgcac
gagttccacaggttgccagtggccagcagggtctacggtagaggcaaggg
gtgaatccttcttctgggattccagaagagcagactctttcttggcttct
gaacttcacacagcggaagggtagatttttattacattgtagcaatttgt
ttcatcagaatccctgataagggtcttggagacctccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_93280282_93281159
seq2: B6Ng01-174E07.b_46_927

seq1  GAATTCTGGGATAGAGCCAAGTGCGATGAAATTGGCCCAGGAAAATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGATAGAGCCAAGTGCGATGAAATTGGCCCAGGAAAATGTGA  50

seq1  GGAGACAGATGCATGGTATCTGAACATAGGTAACCAGCCATGTGGCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGATGCATGGTATCTGAACATAGGTAACCAGCCATGTGGCAGAA  100

seq1  CATAGGTTAAAATACATGGGTTAACTAAATTATGATTCTAGTCAGAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGTTAAAATACATGGGTTAACTAAATTATGATTCTAGTCAGAGTAG  150

seq1  AGCCTAGCTGTTTGGCCAAGTTACTTATAAATATATTTTGAGTCTGAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGCTGTTTGGCCAAGTTACTTATAAATATATTTTGAGTCTGAGTC  200

seq1  TTATTTCTGGGAGCACAGGGCTGGGAGGCAGAACCAGGCACAACTTCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTGGGAGCACAGGGCTGGGAGGCAGAACCAGGCACAACTTCAAC  250

seq1  ACTCACCTCATAATGACCCATTAGAAGCAGTACATAGGCACAGCCCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCTCATAATGACCCATTAGAAGCAGTACATAGGCACAGCCCTTTT  300

seq1  CTGTCCATCATAGGATTTGCCAGGTCACTAATGGATGTTCTTTTCCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCATCATAGGATTTGCCAGGTCACTAATGGATGTTCTTTTCCTCCT  350

seq1  ACTGATATAGTTGAGGACTACTCTTCTGAATCCCAAGGGAGCTAGGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATATAGTTGAGGACTACTCTTCTGAATCCCAAGGGAGCTAGGTGTG  400

seq1  GGACTGTCCTAAACAGCCATGACAAGGCAACCTGGAGGACACTGGGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTCCTAAACAGCCATGACAAGGCAACCTGGAGGACACTGGGGCTG  450

seq1  TGTCCTCTTCAGAGGACACCATGGTTGGTGCAGACTGAATGTTCAGGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTTCAGAGGACACCATGGTTGGTGCAGACTGAATGTTCAGGACC  500

seq1  TCCAGAAGCAGAAGCTACAGACAGCAGGGAGTCTGCAGTGTCCTGCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGCAGAAGCTACAGACAGCAGGGAGTCTGCAGTGTCCTGCAGCT  550

seq1  AGATGCTGCTTCCTCGTGACACTGGGAAAGTGTTTAAAGCAGAAACTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGCTTCCTCGTGACACTGGGAAAGTGTTTAAAGCAGAAACTATC  600

seq1  CCTAATGTCAGTCCTACCAGTCTCCCAGAGAGGCACTGTTCAACTGACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATGTCAGTCCTACCAGTCTCCCAGAGAGGCACTGTTCAACTGACAC  650

seq1  TGGCTCCTCAAAGCAAAGAGACACAGGGAAGCAACTGACAGGTG-TTAAT  699
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGGCTCCTCAAAGCAAAGAGACACAGGGAAGCAACTGACAGGTGTTTAAT  700

seq1  CAAAGAGTTGATGTCTAGCCCTAACATTGCAGC-TAATTTGAAAGGAAAA  748
      ||||||||||||||||||||||||||||||||| ||||||||| ||||||
seq2  CAAAGAGTTGATGTCTAGCCCTAACATTGCAGCTTAATTTGAAGGGAAAA  750

seq1  CAAACATAAGGG-AAAAAGCCTTGCTGGGCATGGTGGCATATGCCTTTAG  797
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAAACATAAGGGAAAAAAGCCTTGCTGGGCATGGTGGCATATGCCTTTAG  800

seq1  CCCCAGCATTCAGAAGGCAGATCTCTGTGAGTTCAAGGCCAACCTGGTCT  847
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCCAGCATTCAGAAGGCAGATCTCTGTGAG-TCAAGGCCAACCTGGTCT  849

seq1  ACA-TAGCAAATTTC-GGGCCTGTCAGGGCTAC  878
      ||| ||||||||||| |||||||||||||||||
seq2  ACATTAGCAAATTTCGGGGCCTGTCAGGGCTAC  882

seq1: chr16_93460594_93461088
seq2: B6Ng01-174E07.g_69_564 (reverse)

seq1  CCTGGAGGTCTCCAAGACCCTTATCAGGGCTTCTGATG-AACAAATTGCT  49
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  CCTGGAGGTCTCCAAGACCCTTATCAGGGATTCTGATGAAACAAATTGCT  50

seq1  ACAATGTAATAAAAATCTACCCTTCCGCTGTGTGAAGTTCAGAAGCCAAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTAATAAAAATCTACCCTTCCGCTGTGTGAAGTTCAGAAGCCAAG  100

seq1  AAAGAGTCTGCTCTTCTGGAATCCCAGAAGAAGGATTCACCCCTTGCCTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTCTGCTCTTCTGGAATCCCAGAAGAAGGATTCACCCCTTGCCTC  150

seq1  TACCGTAGACCCTGCTGGCCACTGGCAACCTGTGGAACTCGTGCATTGGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGTAGACCCTGCTGGCCACTGGCAACCTGTGGAACTCGTGCATTGGC  200

seq1  AGCAGCATTCCATTCTCTGCCTGCATCTTTACATCAATGTCTCCATTGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCATTCCATTCTCTGCCTGCATCTTTACATCAATGTCTCCATTGTG  250

seq1  CATCCACCTCAAATCCCCTGTCTTTTCCCTTATGAGGACACCAGCCAGCG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACCTCAAATCCCCTGTCTTTTCCCTTATGAGGACACCAGCCAGCG  300

seq1  GAGTTAAGTCTCCTGCTAAACCCACCATGACCTCACCCTGAGATCCCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAGTCTCCTGCTAAACCCACCATGACCTCACCCTGAGATCCCTCT  350

seq1  CCGGAGGCTGGCCGCCTGTGAGACCCTATTTCCAGATTAAAGTCACAGTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGGCTGGCCGCCTGTGAGACCCTATTTCCAGATTAAAGTCACAGTC  400

seq1  TCAGTGTGTCAGTCAACTTCCCATGGCTCTGATAAAATACCCAGATAAAA  449
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCAGTGTGTCAGTCAACTTCCCATGGCTATGATAAAATACCCAGATAAAA  450

seq1  GGCTCCAGACGGAAGATGTCTTTGGACACAAGGTTTCAGAGAATTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGACGGAAGATGTCTTTGGACACAAGGTTTCAGAGAATTC  496