BAC Information

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BAC

Clone NameB6Ng01-175B14
Chromosome16 (Build37)
Map Location 14,024,337 - 14,194,992
singlet/doubletdoublet
Overlap gene2900011O08Rik, 4921513D23Rik, Nde1
Upstream geneErcc4, Gt4-1, Mkl2, Parn, LOC100043196, 3110001I22Rik, Pla2g10, A930007A09Rik, LOC622757, Rrn3, Ntan1, Pdxdc1, Mpv17l, Ifitm7
Downstream geneMyh11, 0610037P05Rik, Abcc1, Gm1758, Snai2, Efcab1, LOC100042737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175B14.bB6Ng01-175B14.g
ACCGA002996GA002997
length1,0711,071
definitionB6Ng01-175B14.b B6Ng01-175B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,193,921 - 14,194,992)(14,024,337 - 14,025,373)
sequence
gaattcaagttcttagatgggctatcagagaaaaatccaaataagacgta
caggtcaggagccacagtcaccagcaactttgtttacatgaaatgaggaa
gttacatgaatgggtgccacagcccccaacccactcccaacctttccctg
acctgcctgaccttccagtttgggaggaaatcccgtttgaaaattccctt
ccctttcctgcctgccacacctcagacacacagttcacttcgcccaagtg
acttttttagtcatctgaattaaaaaaagaaacactgctcccagagcgag
cggagcagagcaatcacacttatttgcacccatggtcactttcactaata
aaaggttgtaagtcacgagaaaggagttggctcttctgtccagctgttgt
cttggcaactcgtttaatcctctcagtgatcccactacaagaaagtgtac
acgaagcccaaatgaattctgtgtttagaactgggccctgtgtccaagct
gcacaaagatcgcagcatcccccaaacacaaagtccatggtacttctgga
cccaagccttttgagggcagcacattcaaccaatattttaagtacaaagt
ttctttcatctgtttaaattgcaatacagtattttggcctagcagagggg
gtcagcaggacacctctattaaggccagacatgcagtatttaggactgct
gctcactacccacagtgcaggcctgatgacctgagtttgatccttggaat
tcacataaagttaggtgtactctgaccactacatgagtgttggggcatat
actctctcacgcacaaataatggacttaaatacttcagatttgtagacca
catctgcctctataacacattcatcttcaaacaaaatgcgcaaaaccatt
aaaaacaaaacaaaaagcaaaaccacttaagggcatggtggcccatgtcc
ataatccttgggcttggaaggctgaggcagggctgaccataactccaagg
ctatctcaccctaccccaacacccattagaaaaagtgttcttagcatgaa
aacccttacagaagcaggcca
gaattctttgtttagctctgtaccccatttttaatggggttatttgactt
tctggagtccatcttcttgagttctttatatatattggattttagtcccc
tatctgatttaggattgataaagatcttttcccaatttgttggtggcctt
tttgtcttattggcagtgtcttttgccttacagaagctttgcaaatttat
gaggtcccatttgtcaattcttgatcttacagcacaagccattgctgttc
tgttcaggaatttttctcctgtgaccatatcttcgaggtttttccccact
ttctcctctataagtttcagtgtctctggtttaatgtggagttccttgat
ccacttagacttgagctttgtacaaggagataagaatggatcaatttgca
ttcttctacatgataaccaccagttgggcctgcaccatttgggaaccaaa
gagtttattgtgaggggttatttacaggggaacgggtgaccccaaagcag
gttgaccatcaaaaagtctcatccagcatggatgacaactgccccatagg
tgcactgacaccatactaacttcagctaaacttcaagcctctgtacactc
cagcacctcccaagatgataatgaggctgcaggcacttattgcataatta
cacacagctggctgagaggtgctggctggggtggctagaatcttaagtga
gaggccagtggaccccccccccccctcacgcacacacacacacactcttt
cctataaaggagcatccacagggccaatttttgaggatcttttgcaaatt
agttacagctgttcttatgatttttatactgaagggagagtgtttacaat
agcaggagagagaatatgggaggtaggtgctgagtttgcctcttattctt
agactttggctaattttcccagccctgaacctggttgctatgaatagaag
aagaaaggaagcagctgggtgatagaggatttctgatttggttcagaatt
cttgttgtcaccttcctcatccctttaaaggaaatggatgccagggaaga
ggttgagaataattagaatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_14193921_14194992
seq2: B6Ng01-175B14.b_52_1122 (reverse)

seq1  TGGCCTGCTTCTGT-AGGGTTTTCATGCTAAGAACACTTTTCTTAAATGG  49
      |||||||||||||| |||||||||||||||||||||||||| |  |||||
seq2  TGGCCTGCTTCTGTAAGGGTTTTCATGCTAAGAACACTTTT-TCTAATGG  49

seq1  TTGTTGGGGGTAGGGTGAGATAGCCTTGGAGTTATGGTCAGCCCTGCCTC  99
       |||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTT-GGGGTAGGGTGAGATAGCCTTGGAGTTATGGTCAGCCCTGCCTC  98

seq1  AGCCTTCCAAGCCCAAGGATTATGGACATGGGCCACCATGCCC-TAAGTG  148
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGCCTTCCAAGCCCAAGGATTATGGACATGGGCCACCATGCCCTTAAGTG  148

seq1  GTTTTTGCTTTTTGTTTTGTTTTTAATGGTTTTGCGCATTTTGTTTGAAG  198
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TTTTGCTTTTTGTTTTGTTTTTAATGGTTTTGCGCATTTTGTTTGAAG  197

seq1  ATGAATGTGTTATAGAGGCAGATGTGGTCTACAAATCTGAAGTATTTAAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTGTTATAGAGGCAGATGTGGTCTACAAATCTGAAGTATTTAAG  247

seq1  TCCATTATTTGTGCGTGAGAGAGTATATGCCCCAACACTCATGTAGTGGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATTTGTGCGTGAGAGAGTATATGCCCCAACACTCATGTAGTGGT  297

seq1  CAGAGTACACCTAACTTTATGTGAATTCCAAGGATCAAACTCAGGTCATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTACACCTAACTTTATGTGAATTCCAAGGATCAAACTCAGGTCATC  347

seq1  AGGCCTGCACTGTGGGTAGTGAGCAGCAGTCCTAAATACTGCATGTCTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGCACTGTGGGTAGTGAGCAGCAGTCCTAAATACTGCATGTCTGG  397

seq1  CCTTAATAGAGGTGTCCTGCTGACCCCCTCTGCTAGGCCAAAATACTGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATAGAGGTGTCCTGCTGACCCCCTCTGCTAGGCCAAAATACTGTA  447

seq1  TTGCAATTTAAACAGATGAAAGAAACTTTGTACTTAAAATATTGGTTGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATTTAAACAGATGAAAGAAACTTTGTACTTAAAATATTGGTTGAA  497

seq1  TGTGCTGCCCTCAAAAGGCTTGGGTCCAGAAGTACCATGGACTTTGTGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGCCCTCAAAAGGCTTGGGTCCAGAAGTACCATGGACTTTGTGTT  547

seq1  TGGGGGATGCTGCGATCTTTGTGCAGCTTGGACACAGGGCCCAGTTCTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGATGCTGCGATCTTTGTGCAGCTTGGACACAGGGCCCAGTTCTAA  597

seq1  ACACAGAATTCATTTGGGCTTCGTGTACACTTTCTTGTAGTGGGATCACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAATTCATTTGGGCTTCGTGTACACTTTCTTGTAGTGGGATCACT  647

seq1  GAGAGGATTAAACGAGTTGCCAAGACAACAGCTGGACAGAAGAGCCAACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGATTAAACGAGTTGCCAAGACAACAGCTGGACAGAAGAGCCAACT  697

seq1  CCTTTCTCGTGACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCGTGACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCA  747

seq1  AATAAGTGTGATTGCTCTGCTCCGCTCGCTCTGGGAGCAGTGTTTCTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTGTGATTGCTCTGCTCCGCTCGCTCTGGGAGCAGTGTTTCTTTT  797

seq1  TTTAATTCAGATGACTAAAAAAGTCACTTGGGCGAAGTGAACTGTGTGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTCAGATGACTAAAAAAGTCACTTGGGCGAAGTGAACTGTGTGTC  847

seq1  TGAGGTGTGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGTGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCT  897

seq1  CCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGG  947

seq1  GGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTG  997

seq1  CTGGTGACTGTGGCTCCTGACCTGTACGTCTTATTTGGATTTTTCTCTGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGACTGTGGCTCCTGACCTGTACGTCTTATTTGGATTTTTCTCTGA  1047

seq1  TAGCCCATCTAAGAACTTGAATTC  1072
      ||||||||||||||||||||||||
seq2  TAGCCCATCTAAGAACTTGAATTC  1071

seq1: chr16_14024337_14025373
seq2: B6Ng01-175B14.g_68_1138

seq1  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTAATGGGGTTATTTGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTAATGGGGTTATTTGACTT  50

seq1  TCTGGAGTCCATCTTCTTGAGTTCTTTATATATATTGGATTTTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCATCTTCTTGAGTTCTTTATATATATTGGATTTTAGTCCCC  100

seq1  TATCTGATTTAGGATTGATAAAGATCTTTTCCCAATTTGTTGGTGGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTTAGGATTGATAAAGATCTTTTCCCAATTTGTTGGTGGCCTT  150

seq1  TTTGTCTTATTGGCAGTGTCTTTTGCCTTACAGAAGCTTTGCAAATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTATTGGCAGTGTCTTTTGCCTTACAGAAGCTTTGCAAATTTAT  200

seq1  GAGGTCCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGCTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGCTGTTC  250

seq1  TGTTCAGGAATTTTTCTCCTGTGACCATATCTTCGAGGTTTTTCCCCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGGAATTTTTCTCCTGTGACCATATCTTCGAGGTTTTTCCCCACT  300

seq1  TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTAATGTGGAGTTCCTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTAATGTGGAGTTCCTTGAT  350

seq1  CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATCAATTTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATCAATTTGCA  400

seq1  TTCTTCTACATGATAACCACCAGTTGGGCCTGCACCATTTGGGAACCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTACATGATAACCACCAGTTGGGCCTGCACCATTTGGGAACCAAA  450

seq1  GAGTTTATTGTGAGGGGTTATTTACAGGGGAACGGGTGACCCCAAAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATTGTGAGGGGTTATTTACAGGGGAACGGGTGACCCCAAAGCAG  500

seq1  GTTGACCATCAAAAAGTCTCATCCAGCATGGATGACAACTGCCCCATAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACCATCAAAAAGTCTCATCCAGCATGGATGACAACTGCCCCATAGG  550

seq1  TGCACTGACACCATACTAACTTCAGCTAAACTTCAAGCCTCTGTACACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGACACCATACTAACTTCAGCTAAACTTCAAGCCTCTGTACACTC  600

seq1  CAGCACCTCCCAAGATGATAATGAGGCTGCAGGCACTTATTGCATAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCTCCCAAGATGATAATGAGGCTGCAGGCACTTATTGCATAATTA  650

seq1  CACACAGCTGGCTGAGAGGTGCTGGCTGGGGTGGCTAGAATCTTAAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGCTGGCTGAGAGGTGCTGGCTGGGGTGGCTAGAATCTTAAGTGA  700

seq1  GAGGCCAGTGGA-CCCCCCCCCCCCTCACGCACACACACACACACTCTTT  749
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGTGGACCCCCCCCCCCCCTCACGCACACACACACACACTCTTT  750

seq1  CCTATAAAGGAGCATCCACAGGGCCAA-TTTTGAGGATCTTTTGCAAATT  798
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTATAAAGGAGCATCCACAGGGCCAATTTTTGAGGATCTTTTGCAAATT  800

seq1  AGTTACAGCTGTTCTTATGATTTTTATACTGAA-GGAGAGTG-TTACAAT  846
      ||||||||||||||||||||||||||||||||| |||||||| |||||||
seq2  AGTTACAGCTGTTCTTATGATTTTTATACTGAAGGGAGAGTGTTTACAAT  850

seq1  AGCAGGAGAGAG-ATAT-GGAGGTAGGTGCTGAGTTTGCCTCTTA-TCTT  893
      |||||||||||| |||| ||||||||||||||||||||||||||| ||||
seq2  AGCAGGAGAGAGAATATGGGAGGTAGGTGCTGAGTTTGCCTCTTATTCTT  900

seq1  AGAC-TTGGCTAATTTTCCCAG-CCTGAA-CTGG-TGCTATG-ATAGA--  936
      |||| ||||||||||||||||| |||||| |||| ||||||| |||||  
seq2  AGACTTTGGCTAATTTTCCCAGCCCTGAACCTGGTTGCTATGAATAGAAG  950

seq1  GAGAAAGGAAGCAGCT-GGTGATAGAGGA-TTCTGATT--GGTCAG-ATT  981
       ||||||||||||||| |||||||||||| ||||||||  | |||| |||
seq2  AAGAAAGGAAGCAGCTGGGTGATAGAGGATTTCTGATTTGGTTCAGAATT  1000

seq1  CT--GTGTCACCT--CTCATTCC-TTAAAGGAAATGGATG-CAGGG-AGA  1024
      ||   ||||||||  ||||| || |||||||||||||||| ||||| |||
seq2  CTTGTTGTCACCTTCCTCATCCCTTTAAAGGAAATGGATGCCAGGGAAGA  1050

seq1  GG-TGAG-------AGAATAG  1037
      || ||||       |||||||
seq2  GGTTGAGAATAATTAGAATAG  1071