BAC Information

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BAC

Clone NameB6Ng01-175O01
Chromosome16 (Build37)
Map Location 69,601,514 - 69,602,384
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneSpeer2, EG664930, Gbe1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175O01.bB6Ng01-175O01.g
ACCGA003564GA003565
length1,232880
definitionB6Ng01-175O01.b B6Ng01-175O01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgacaatgaagcacaccatactcaagcctatgggaaacgatg
aaagaagtgctaggagggaatttcatagtgctaagttccttcataaaaaa
ttggtgaattctcataataacaaattaaaaatacacccaaaagctctaga
aaaacaaaagcaaacacaccaaagaggagtaactgaaaggaaataatcaa
attcatgaatgaaagcaaccaaatagaaacaaacagaacagtacaaaaaa
gacaatgaaaacaagagctgcttctttgagataatcaaaaagatagacaa
gctgttagccaaactggctaacaggcacagagacagtacctacattaaca
aaataagaaatgaaaacataacaacagaccacatagaaattaaaataatt
gttaagtatacttttaaagcttgtactccacaaaatttgaaaatctaaat
aaaatggatggttttctagacagataccaattaccaaagttaagtcaaga
gcaggtaaattatctgagtagtctcttaacccctacagaaatagaagcag
tcattaaaagtctcccaaccaaaaaatgcccaggccagatggttttagca
cataattctaccagacattcaaagaagagctaacccccaaactcctcaaa
ctattccagcaaatataaacagaaggaaaactgccaaattcattctacaa
gaccatagtcaccctgatacctaaatcacacaaacactcaaccaagaaag
aaaatttcagagcaatttctttatgaaaattggcatgaaaatattccatg
aaatactggcaaacttaatctaagaacacaacaaagacacagtcaccatt
atcaggtgggcttcatcccagagatgcagagatggctaaatatatgagag
tccattaacataatgtacaatataaacaaactgaacaacaaaagcagcaa
caaaacccatgatcagcacactagatgtttaaaagcctttgtcaaatcca
acatcctttcatgttaaaaattttggcgagatcagggcatgaggtagggc
taatcgcagtaaaggctataataacagcaagtcaatagccacatcaaatg
aatggagaaaaactgaaagaatttgaataatcatgacaagaacaaagctg
tacccttctctattctcttcaataccttactgaatgttctaacctaaaac
acccttagagacaaacccaaatgtgaggggat

gaattctctgcatgcccctaaagagcttaaccttagtaagccatggaact
ggtgacaaaactggaaggtacattcatccacagtgagcaaagcatctgaa
ggatctgtcattatgtgaaacagtgactcaaagcttgtgaccaacataca
ggacaggttgcagtacacctggtagccctctggcgggtacaaaatgccag
atgatgggtaaaatcagagtgcaaccactaggtaactcctgtgtcatagt
gtagatcagaaaggatgtgaattatttagcagtgtgccttcaaacaattt
taaaaacaaacaaaccaaaaagctggaagttatctgaacaatttgatgga
taatttgtattacaatgtatacctgtgattatcagatgtatgcaatatgt
catctcgtctttagagctatgaggtcaaaaagagaagggcactggttata
catgactgtttaaattctaatttaagtacatttgaattaaaaaaaattaa
cattcaattaggcagattagatgcatttccagactaaaataaatgcctgt
ggttggtgtctactatatggtaccaagaagaaactcatccaaacatccat
catatcttaaaatatctttgggtattgggttcacactaaaatagaataaa
tagtcatatatatatatatattaaatacatacatacatatatatatatat
atatatatatatatatatatatatatatatattaaagtctatgtccaatt
acccaaatagttttcatgtattagtcttagtatttaacaggtcattttct
aatatagacattcgcttttagattgataagattcatgaagtgaacagaaa
gtgcagaaaaaaaaaacaggagtccttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69601514_69602384
seq2: B6Ng01-175O01.g_63_942

seq1  GAATTCTCTGCATGCCCCTAAAGAGCTTAACCTTAGTAAGCCATGGAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCATGCCCCTAAAGAGCTTAACCTTAGTAAGCCATGGAACT  50

seq1  GGTGACAAAACTGGAAGGTACATTCATCCACAGTGAGCAAAGCATCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAAAACTGGAAGGTACATTCATCCACAGTGAGCAAAGCATCTGAA  100

seq1  GGATCTGTCATTATGTGAAACAGTGACTCAAAGCTTGTGACCAACATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGTCATTATGTGAAACAGTGACTCAAAGCTTGTGACCAACATACA  150

seq1  GGACAGGTTGCAGTACACCTGGTAGCCCTCTGGCGGGTACAAAATGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGTTGCAGTACACCTGGTAGCCCTCTGGCGGGTACAAAATGCCAG  200

seq1  ATGATGGGTAAAATCAGAGTGCAACCACTAGGTAACTCCTGTGTCATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGGTAAAATCAGAGTGCAACCACTAGGTAACTCCTGTGTCATAGT  250

seq1  GTAGATCAGAAAGGATGTGAATTATTTAGCAGTGTGCCTTCAAACAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCAGAAAGGATGTGAATTATTTAGCAGTGTGCCTTCAAACAATTT  300

seq1  TAAAAACAAACAAACCAAAAAGCTGGAAGTTATCTGAACAATTTGATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAAACAAACCAAAAAGCTGGAAGTTATCTGAACAATTTGATGGA  350

seq1  TAATTTGTATTACAATGTATACCTGTGATTATCAGATGTATGCAATATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTATTACAATGTATACCTGTGATTATCAGATGTATGCAATATGT  400

seq1  CATCTCGTCTTTAGAGCTATGAGGTCAAAAAGAGAAGGGCACTGGTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCGTCTTTAGAGCTATGAGGTCAAAAAGAGAAGGGCACTGGTTATA  450

seq1  CATGACTGTTTAAATTCTAATTTAAGTACATTTGAATTAAAAAAAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTGTTTAAATTCTAATTTAAGTACATTTGAATTAAAAAAAATTAA  500

seq1  CATTCAATTAGGCAGATTAGATGCATTTCCAGACTAAAATAAATGCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAATTAGGCAGATTAGATGCATTTCCAGACTAAAATAAATGCCTGT  550

seq1  GGTTGGTGTCTACTATATGGTACCAAGAAGAAACTCATCCAAACATCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTGTCTACTATATGGTACCAAGAAGAAACTCATCCAAACATCCAT  600

seq1  CATATCTTAAAATATCTTTGGGTATTGGGTTCACACTAAAATAGAATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTTAAAATATCTTTGGGTATTGGGTTCACACTAAAATAGAATAAA  650

seq1  TAGTCATATATATATATATATTAAATACATACATACATATATATATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATATATATATATATATTAAATACATACATACATATATATATATAT  700

seq1  ATATATATATATATATATATATATATATATATTAAAGTCATTGTCCAATT  750
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  ATATATATATATATATATATATATATATATATTAAAGTCTATGTCCAATT  750

seq1  ACCC-AATAG-TTTCATGTATTAGTCTTAGTA-TTAACAAGTCA-TTTCT  796
      |||| ||||| ||||||||||||||||||||| |||||| |||| |||||
seq2  ACCCAAATAGTTTTCATGTATTAGTCTTAGTATTTAACAGGTCATTTTCT  800

seq1  AATATTGGCA-TCAC-TTTAGAATGAAGAGATTCA-GAACTAAACAGAAA  843
      ||||| | || || | |||||| |||  ||||||| ||| | ||||||||
seq2  AATATAGACATTCGCTTTTAGATTGATAAGATTCATGAAGTGAACAGAAA  850

seq1  GTGCAG-AAAAAAAAACAGGAGT-CTTCAA  871
      |||||| |||||||||||||||| ||||||
seq2  GTGCAGAAAAAAAAAACAGGAGTCCTTCAA  880


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