BAC Information

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BAC

Clone NameB6Ng01-183B10
Chromosome16 (Build37)
Map Location 27,944,278 - 27,945,033
singlet/doubletsinglet
Overlap genenone
Upstream geneGm606, Ostn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183B10.bB6Ng01-183B10.g
ACCGA008807GA008808
length1,2081,119
definitionB6Ng01-183B10.b B6Ng01-183B10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacataacattataaaagcaatctacagcaaatcag
tagccaacatcaaagtaaatggtaagaagctggaagcaatcccactaaaa
tcaggaactagacaaggctgcccactttctccctacctattcaacattgt
acttgaagtcctagacagagcaattcgacaacaaaaggagatcaaaggga
tacaaatggcaaaggaagaagtcaaaatatcactttttgcagatgatatg
atagtatatataagtgattctaaaaattcctccagagaactcctaaacct
gataaacagcttcagtgaagtagctggatataaaattaactcaaacaatt
caatggcctttctctacacaaaggataaacaggctgagaaagaaattagg
gaaacaacacccttcacaatagtcacaaataatataaaataccttggtgt
gactctaactaaggaagtgaaagatctgtatgataagaacttcaagtctc
tgaagaaagaaattaaagaagatctcagaagatggaaaaatctcccatgc
tcatggattggcaggaccaatatagtaaaaatggctatcttgccaaaagc
gatctacagattcaaaacaatccccatcaaaattccaactcaattcttta
acgaattagaaagggcaatctgcaaatttatctggaataacaaaaaacct
acgatagcaaaaactcttctcaaggttaaaagaacctctggtggaatcac
catgcctgacctaaagctgtactacagagcaattgtgataaaaactgcat
ggtactggtatagcaacagactagtagaccaatggaatagaatttgacga
cccagaaaatgaacccacacacctatagtcacttgatctttgacaaggga
gctaaaaccatccagtggaaaaaagacagcattttcaacaattggtgctg
gcacaactggtggtttcatgtagaagaattcgaattgatccattcctatc
ctccttgtactaggtcaaatcttaggtgatcaaggactgcactaaaacag
agaccactgaactataggagggagaaagtggcggaaaggcctcgagaatt
ggcaccaggaaatttcctggatagaacagcaatgacttgctgtagactgg
aattgatatggacaattggtacctcatataaactggctaaggccttcctg
tagagcta

gaattccacagacatttaaagaataattaatgccaatacttctcaaatta
ttcctcatagaaacataaaaatcattgcccaatttgttttataagttcac
atttactgtgatacttaagctatataaagatacaaaaagaagaattgcag
atcaattttactcttgaatatatatgcataaataagccattaaatacttg
cataccaattccaagaacagagcaaaaagatcacccaccatgatcaagaa
ggcttcatctcacagctgcatgcatggttcaatgcacatatatcaataag
tgtaatccactatataaagcgagtgagagtaaacatagtgagagacaaat
accacaggatccacttattagatgcataaaagacctctgacaaaattcta
tacccttttatgctaaaagctctcaagagactaggaagaaaagaaacata
cctcaataaagtaaaagtgacttatagaaaggactcagccatcaacaact
taaatagagagaaaccaaaaacaacaaaaataaaacaaaaacaaaaacaa
aacaaaacatcctatttccgctaaaggcagaaacagggcagggtggtcaa
ctttcttttttttttttttttttttgtttttgtttttgtttttgtttttg
tttttttgagacagggtttctctgtatagccctggctgtcctggaactca
ctctgtagacctggctagcttcaaactcagaaaaaacgcgcctgcctctg
cctcctgagtgctgggattaaaggcatgcaccaccacacccagcttctac
ttttcttttatacctattcaatacagtactttataagtcttagctagagc
aataagacagctgtcaagactggtttaattttttgtttgcatcaagtgac
cagagataattctagaagccaaaagcatatcatttctaggaaaaggtaga
attgtagaggaaagggtattataatgaaaagcaaagaaaaataaggaaaa
accttcaaatttgttagtaagttgttaattcacaactcacactacataac
taaggtagggagaagatctgatgttgattgaaatgagcaaacttgaaatc
aagtgtaaatgacaatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_27944278_27945033
seq2: B6Ng01-183B10.g_428_1183

seq1  CTTATTAGATGCATAAAAGACCTCTGACAAAATTCTATACCCTTTTATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAGATGCATAAAAGACCTCTGACAAAATTCTATACCCTTTTATGC  50

seq1  TAAAAGCTCTCAAGAGACTAGGAAGAAAAGAAACATACCTCAATAAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCTCTCAAGAGACTAGGAAGAAAAGAAACATACCTCAATAAAGTA  100

seq1  AAAGTGACTTATAGAAAGGACTCAGCCATCAACAACTTAAATAGAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGACTTATAGAAAGGACTCAGCCATCAACAACTTAAATAGAGAGAA  150

seq1  ACCAAAAACAACAAAAATAAAACAAAAACAAAAACAAAACAAAACATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAACAACAAAAATAAAACAAAAACAAAAACAAAACAAAACATCCT  200

seq1  ATTTCCGCTAAAGGCAGAAACAGGGCAGGGTGGTCAACTTTCTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCGCTAAAGGCAGAAACAGGGCAGGGTGGTCAACTTTCTTTTTTTT  250

seq1  TTTTTTTTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTTTGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTTTGAGACA  300

seq1  GGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCTG  350

seq1  GCTAGCTTCAAACTCAGAAAAAACGCGCCTGCCTCTGCCTCCTGAGTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTTCAAACTCAGAAAAAACGCGCCTGCCTCTGCCTCCTGAGTGCT  400

seq1  GGGATTAAAGGCATGCACCACCACACCCAGCTTCTACTTT--CTTTATAC  448
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  GGGATTAAAGGCATGCACCACCACACCCAGCTTCTACTTTTCTTTTATAC  450

seq1  CTATTCAATACAGTACTTTATAAGTCTTAGCTAGAGCAATAAGACAGCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAATACAGTACTTTATAAGTCTTAGCTAGAGCAATAAGACAGCTG  500

seq1  TCAAGACTGGTTTAA-TTTTTGTTTGCATCAAGTGACCAGAGAT-ATTCT  546
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  TCAAGACTGGTTTAATTTTTTGTTTGCATCAAGTGACCAGAGATAATTCT  550

seq1  AGAAGCC-AAAGCATATCATTTCTA-GAAAAGGTAGAATTGTAGAGG-AA  593
      ||||||| ||||||||||||||||| ||||||||||||||||||||| ||
seq2  AGAAGCCAAAAGCATATCATTTCTAGGAAAAGGTAGAATTGTAGAGGAAA  600

seq1  GGGTA-TAT-ATGAAAAGCAAAAGAAAAAT-AGGAAAAACCTTCAAA-TT  639
      ||||| ||| ||||||||| |||||||||| |||||||||||||||| ||
seq2  GGGTATTATAATGAAAAGC-AAAGAAAAATAAGGAAAAACCTTCAAATTT  649

seq1  GTTAGTAAGTTG-TAATTCACCAACTTCACACTTAACATAACTAAAGTAG  688
      |||||||||||| ||||||| |||| |||||||  |||||||||| ||||
seq2  GTTAGTAAGTTGTTAATTCA-CAAC-TCACACT--ACATAACTAAGGTAG  695

seq1  GGAGAAAGAATCTGATGTTGAATGAAAATGAGCAAAATTTTAAAAATCAA  738
      ||||||   |||||||||||| || ||||||||||| ||    |||||||
seq2  GGAGAA--GATCTGATGTTGATTG-AAATGAGCAAACTT---GAAATCAA  739

seq1  GTTGTAAATGACAATCTA  756
      | ||||||||||||||||
seq2  G-TGTAAATGACAATCTA  756


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