BAC Information

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BAC

Clone NameB6Ng01-183B13
Chromosome16 (Build37)
Map Location 15,253,557 - 15,254,719
singlet/doubletsinglet
Overlap genenone
Upstream geneMyh11, 0610037P05Rik, Abcc1, Gm1758, Snai2, Efcab1, LOC100042737, LOC665653, LOC385748
Downstream geneLOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010, D16Ertd727e, Pkp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183B13.b
ACCGA008813
length1,167
definitionB6Ng01-183B13.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcccataagtcaaggctgtgtaccactaggtcaccagtgatgac
catgtgttgatgcctatatatagaacccccgaaagtgacactcatctttc
ccacagtctatgggctacagttctctttccttccttgtctgccaccctag
gcatttggcaagattctcatttaactttgaaaatcaaggctagaaaactt
tagcagatttaatgtatctataaacttcagaattatgctttttagcatat
agtttttagtttcagtagggggcaagccggagaaggaaaaacaccaaaaa
tgtaattctattttgaaaattctaaacatcttaatggaataatagcacct
aatgtagagctgtattagagacccttttctgtgtgatccaacacagtttt
tttgttttgttttgttttttgtttttgttttggttttgttttttttgcaa
atttatggttcttttctattaaacagatagacagatacatggatgtgtac
ataatataaacattaaatgcagtattacaaccagcttctacagaactctt
catcaactgtagtctgttttataataggaattatatattctgtatgaagg
acacacaatccaggtatttatttacaagttgtaagcctaggttggacagg
ttttgagctattataacttacatcccagccacatatcccatgttacttgg
tgtttctcctgggcacatgcacatggtccatcttttctcatggctgcctc
ctcctctctttacctcctctcttatttccccttctccctttttctcctac
tgtgaccccccagccaggtaacttaaaacccacctatctctatttcctcc
agtaattggctgtcaccagttttatttaaccaatagttttaaattaagaa
gcaaggtttgaacaacaaagctggtatacatgagaatttgcttcttttgg
ggtaaccagatcttggggtatagaatttagtattttgaacacagcagcac
cagagcaacctcaacggtgttttggagttagtgaggagtgtattaaaaca
atatcatttacatactcaattaccataaaaaacttgcagaaattccttgg
ggattttctttggatgcattggaggcatttattctggcctaatccaaggc
aagcaagctcagtacca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_15253557_15254719
seq2: B6Ng01-183B13.b_49_1215

seq1  GAATTCTCCCATAAGTCAAGGCTGTGTACCACTAGGTCACCAGTGATGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCATAAGTCAAGGCTGTGTACCACTAGGTCACCAGTGATGAC  50

seq1  CATGTGTTGATGCCTATATATAGAACCCCCGAAAGTGACACTCATCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTGATGCCTATATATAGAACCCCCGAAAGTGACACTCATCTTTC  100

seq1  CCACAGTCTATGGGCTACAGTTCTCTTTCCTTCCTTGTCTGCCACCCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTCTATGGGCTACAGTTCTCTTTCCTTCCTTGTCTGCCACCCTAG  150

seq1  GCATTTGGCAAGATTCTCATTTAACTTTGAAAATCAAGGCTAGAAAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGGCAAGATTCTCATTTAACTTTGAAAATCAAGGCTAGAAAACTT  200

seq1  TAGCAGATTTAATGTATCTATAAACTTCAGAATTATGCTTTTTAGCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGATTTAATGTATCTATAAACTTCAGAATTATGCTTTTTAGCATAT  250

seq1  AGTTTTTAGTTTCAGTAGGGGGCAAGCCGGAGAAGGAAAAACACCAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTAGTTTCAGTAGGGGGCAAGCCGGAGAAGGAAAAACACCAAAAA  300

seq1  TGTAATTCTATTTTGAAAATTCTAAACATCTTAATGGAATAATAGCACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTCTATTTTGAAAATTCTAAACATCTTAATGGAATAATAGCACCT  350

seq1  AATGTAGAGCTGTATTAGAGACCCTTTTCTGTGTGATCCAACACAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGAGCTGTATTAGAGACCCTTTTCTGTGTGATCCAACACAGTTTT  400

seq1  TTTGTTTTGTTTTGTTTTTTGTTTTTGTTTTGGTTTTGTTTTTTTTGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTGTTTTTTGTTTTTGTTTTGGTTTTGTTTTTTTTGCAA  450

seq1  ATTTATGGTTCTTTTCTATTAAACAGATAGACAGATACATGGATGTGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGGTTCTTTTCTATTAAACAGATAGACAGATACATGGATGTGTAC  500

seq1  ATAATATAAACATTAAATGCAGTATTACAACCAGCTTCTACAGAACTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATAAACATTAAATGCAGTATTACAACCAGCTTCTACAGAACTCTT  550

seq1  CATCAACTGTAGTCTGTTTTATAATAGGAATTATATATTCTGTATGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACTGTAGTCTGTTTTATAATAGGAATTATATATTCTGTATGAAGG  600

seq1  ACACACAATCCAGGTATTTATTTACAAGTTGTAAGCCTAGGTTGGACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAATCCAGGTATTTATTTACAAGTTGTAAGCCTAGGTTGGACAGG  650

seq1  TTTTGAGCTATTATAACTTACATCCCAGCCACATATCCCATGTTACTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGCTATTATAACTTACATCCCAGCCACATATCCCATGTTACTTGG  700

seq1  TGTTTCTCCTGGGCACATGCACATGGTCCATCTTTTCTCATGGCTGCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCCTGGGCACATGCACATGGTCCATCTTTTCTCATGGCTGCCTC  750

seq1  CTCCTCTCTTTACCTCCTCTCTTATTTCCCCTTCTCCC-TTTTCTCCTAC  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTCCTCTCTTTACCTCCTCTCTTATTTCCCCTTCTCCCTTTTTCTCCTAC  800

seq1  TGTGACCCCCCAGCCAGGTAACTTAAAACCCACCTATCTCTATTTCCTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCCCCCAGCCAGGTAACTTAAAACCCACCTATCTCTATTTCCTCC  850

seq1  AGTAATTGGCTGTCACCAGTTTTATTTAACCAATAGTTTTAAATTAAGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTGGCTGTCACCAGTTTTATTTAACCAATAGTTTTAAATTAAGAA  900

seq1  GCAAGGTTTGAACAACAAAAGCTGGTATACATGAGAATTTGCTCCTTTTG  949
      |||||||||||||||| |||||||||||||||||||||||||| ||||||
seq2  GCAAGGTTTGAACAAC-AAAGCTGGTATACATGAGAATTTGCTTCTTTTG  949

seq1  GGGTAACCAGATCTTGGGGTATAGAATTTAGTA-TTTGAACACAGCAGCA  998
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGGTAACCAGATCTTGGGGTATAGAATTTAGTATTTTGAACACAGCAGCA  999

seq1  CCAGAGCAACCCCAACGGTG-TTTGGAGTTAAGTGAGGAGTGTATTAAAA  1047
      ||||||||||| |||||||| ||||||||| |||||||||||||||||||
seq2  CCAGAGCAACCTCAACGGTGTTTTGGAGTT-AGTGAGGAGTGTATTAAAA  1048

seq1  CAATATCA-TTACATACTTCAAATAACAT-AAAAACTTGCAGAAA-TCCT  1094
      |||||||| |||||||| |||| || ||| ||||||||||||||| ||||
seq2  CAATATCATTTACATAC-TCAATTACCATAAAAAACTTGCAGAAATTCCT  1097

seq1  TGGGAATTTTCCTTTTGATAGCAATTGAGGGCATTTATTCT-GCCT-ATC  1142
      |||| ||||| |||| ||| || ||||  |||||||||||| |||| |||
seq2  TGGGGATTTT-CTTTGGAT-GC-ATTGGAGGCATTTATTCTGGCCTAATC  1144

seq1  CAAGGC-AGC-AGCTCAGTACCA  1163
      |||||| ||| ||||||||||||
seq2  CAAGGCAAGCAAGCTCAGTACCA  1167