BAC Information

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BAC

Clone NameB6Ng01-183P14
Chromosome16 (Build37)
Map Location 24,255,549 - 24,404,130
singlet/doubletdoublet
Overlap geneLOC666580, LOC100043564, 1110054M08Rik, Lpp
Upstream geneBC106179, St6gal1, Rtp1, Masp1, LOC100043018, Rtp4, EG625969, LOC100043023, Sst, Rtp2, Bcl6, EG433009
Downstream geneA730098P11Rik, 5430420C16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183P14.bB6Ng01-183P14.g
ACCGA009467GA009468
length863794
definitionB6Ng01-183P14.b B6Ng01-183P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,403,270 - 24,404,130)(24,255,549 - 24,256,342)
sequence
gaattcattagaaaccgccagtgtgggtaacactgtgagcgcctggctct
ttatgcattactgctctgagctcccacagttatagttagagatcattatc
aagatgggccacagcatggaaaataacagatccaggaacccagctaaagt
acacagagacaatcaatctttcccagctcttagtagcgagagcaatttca
gccgcctgtcgcatctaggcctaagtctccccatcctcggatgtctcaac
aagcccaggcactcccagcaagcccctgcagaagccccagctcagtggcc
tcttctgtgcccctcagtgctttttcacagactctgggtaacatgcttta
ccatctgaataaacgaagtggttacaatcttgacatccagccttcccaaa
ggcagatcatccagccatgctccgtgagtgcctagcctcacctgagacaa
aacagcagctgggtctttcaagtcacttgcaatgcctccttcagtcttca
catggaggacctgtaagtgagccgtccttcagatcagaggactgctgaga
agaaaggggaacaagggcatacataggcagaaacaggacagtccgaaatg
atggctgcttcatgcaggaggtagcagtagatcggcttttcatttcatta
ccatttatttgcttactcactcactcacttattaagttgtgtgcacacac
atgcttgcaggtcacagcacacacgcacagaggtcagagcaagtgtttta
cctgatgaatcatctcactagcccactgtagatagatgtgttattatgta
aagaaatcaaggctaaaaccttacattcagaagtcttttaatataaaggg
gggggggggggtt
gaattccacctgcagacacagcactgtgccacttctcaggctaaggcagg
aattctgggactagaacatcagacgccaccacggtccacactccaaatga
ttctgcgtttttcacataactggcttaaactcccagtaaatgctgaactt
agacttggatttctgtctaattcttctcctccaatagtttatgtgtattt
cagctggcatatctggagcaattattgcccattctgaggctgtggctgac
gatatccactcctataaaactaggtataccagttttaatcccaggagtta
ggaacctactgcttgattccccttgacgctctgatactaccagagtcaac
aagtgatgctttccaaacacgagggagatcctgcttttccgttttcactg
gtccttcctggtccttagcatcagacatagctccccgtactgtccacaga
ccacatttgtcactagccttcctcagcccaccagcagctgtggctgcccc
tagaggacaggatgaggcttctcagatctgctgtcccacggtttgcttga
tcagctttccttactacttgcagaaagggtttttgatttctaaaataaaa
atagcaattaagtgccaccagtgccaccaggagacctccaaaggaagaaa
taaacagaaagaaagtagtcactaacttttgttgaagtcactgcaaatgg
ggagagatataatattcacggatagaaaaactcagttctgttaagatgct
agtgttgttttgtattttgtttgtttggttgttgttgttgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_24403270_24404130
seq2: B6Ng01-183P14.b_46_908 (reverse)

seq1  AA--CCCCCCCCCCCCTTTATATTAAAAGACTTCTGAATGTAAGGTTTTA  48
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCCCCCCCCCCTTTATATTAAAAGACTTCTGAATGTAAGGTTTTA  50

seq1  GCCTTGATTTCTTTACATAATAACACATCTATCTACAGTGGGCTAGTGAG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGATTTCTTTACATAATAACACATCTATCTACAGTGGGCTAGTGAG  100

seq1  ATGATTCATCAGGTAAAACACTTGCTCTGACCTCTGTGCGTGTGTGCTGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCATCAGGTAAAACACTTGCTCTGACCTCTGTGCGTGTGTGCTGT  150

seq1  GACCTGCAAGCATGTGTGTGCACACAACTTAATAAGTGAGTGAGTGAGTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGCAAGCATGTGTGTGCACACAACTTAATAAGTGAGTGAGTGAGTA  200

seq1  AGCAAATAAATGGTAATGAAATGAAAAGCCGATCTACTGCTACCTCCTGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATAAATGGTAATGAAATGAAAAGCCGATCTACTGCTACCTCCTGC  250

seq1  ATGAAGCAGCCATCATTTCGGACTGTCCTGTTTCTGCCTATGTATGCCCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCAGCCATCATTTCGGACTGTCCTGTTTCTGCCTATGTATGCCCT  300

seq1  TGTTCCCCTTTCTTCTCAGCAGTCCTCTGATCTGAAGGACGGCTCACTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCCTTTCTTCTCAGCAGTCCTCTGATCTGAAGGACGGCTCACTTA  350

seq1  CAGGTCCTCCATGTGAAGACTGAAGGAGGCATTGCAAGTGACTTGAAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTCCATGTGAAGACTGAAGGAGGCATTGCAAGTGACTTGAAAGA  400

seq1  CCCAGCTGCTGTTTTGTCTCAGGTGAGGCTAGGCACTCACGGAGCATGGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTGCTGTTTTGTCTCAGGTGAGGCTAGGCACTCACGGAGCATGGC  450

seq1  TGGATGATCTGCCTTTGGGAAGGCTGGATGTCAAGATTGTAACCACTTCG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGATCTGCCTTTGGGAAGGCTGGATGTCAAGATTGTAACCACTTCG  500

seq1  TTTATTCAGATGGTAAAGCATGTTACCCAGAGTCTGTGAAAAAGCACTGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGATGGTAAAGCATGTTACCCAGAGTCTGTGAAAAAGCACTGA  550

seq1  GGGGCACAGAAGAGGCCACTGAGCTGGGGCTTCTGCAGGGGCTTGCTGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCACAGAAGAGGCCACTGAGCTGGGGCTTCTGCAGGGGCTTGCTGGG  600

seq1  AGTGCCTGGGCTTGTTGAGACATCCGAGGATGGGGAGACTTAGGCCTAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTGGGCTTGTTGAGACATCCGAGGATGGGGAGACTTAGGCCTAGA  650

seq1  TGCGACAGGCGGCTGAAATTGCTCTCGCTACTAAGAGCTGGGAAAGATTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGACAGGCGGCTGAAATTGCTCTCGCTACTAAGAGCTGGGAAAGATTG  700

seq1  ATTGTCTCTGTGTACTTTAGCTGGGTTCCTGGATCTGTTATTTTCCATGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTCTGTGTACTTTAGCTGGGTTCCTGGATCTGTTATTTTCCATGC  750

seq1  TGTGGCCCATCTTGATAATGATCTCTAACTATAACTGTGGGAGCTCAGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCCATCTTGATAATGATCTCTAACTATAACTGTGGGAGCTCAGAG  800

seq1  CAGTAATGCATAAAGAGCCAGGCGCTCACAGTGTTACCCACACTGGCGGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATGCATAAAGAGCCAGGCGCTCACAGTGTTACCCACACTGGCGGT  850

seq1  TTCTAATGAATTC  861
      |||||||||||||
seq2  TTCTAATGAATTC  863

seq1: chr16_24255549_24256342
seq2: B6Ng01-183P14.g_68_861

seq1  GAATTCCACCTGCAGACACAGCACTGTGCCACTTCTCAGGCTAAGGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTGCAGACACAGCACTGTGCCACTTCTCAGGCTAAGGCAGG  50

seq1  AATTCTGGGACTAGAACATCAGACGCCACCACGGTCCACACTCCAAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGGACTAGAACATCAGACGCCACCACGGTCCACACTCCAAATGA  100

seq1  TTCTGCGTTTTTCACATAACTGGCTTAAACTCCCAGTAAATGCTGAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCGTTTTTCACATAACTGGCTTAAACTCCCAGTAAATGCTGAACTT  150

seq1  AGACTTGGATTTCTGTCTAATTCTTCTCCTCCAATAGTTTATGTGTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGATTTCTGTCTAATTCTTCTCCTCCAATAGTTTATGTGTATTT  200

seq1  CAGCTGGCATATCTGGAGCAATTATTGCCCATTCTGAGGCTGTGGCTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGCATATCTGGAGCAATTATTGCCCATTCTGAGGCTGTGGCTGAC  250

seq1  GATATCCACTCCTATAAAACTAGGTATACCAGTTTTAATCCCAGGAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCACTCCTATAAAACTAGGTATACCAGTTTTAATCCCAGGAGTTA  300

seq1  GGAACCTACTGCTTGATTCCCCTTGACGCTCTGATACTACCAGAGTCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTACTGCTTGATTCCCCTTGACGCTCTGATACTACCAGAGTCAAC  350

seq1  AAGTGATGCTTTCCAAACACGAGGGAGATCCTGCTTTTCCGTTTTCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATGCTTTCCAAACACGAGGGAGATCCTGCTTTTCCGTTTTCACTG  400

seq1  GTCCTTCCTGGTCCTTAGCATCAGACATAGCTCCCCGTACTGTCCACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCCTGGTCCTTAGCATCAGACATAGCTCCCCGTACTGTCCACAGA  450

seq1  CCACATTTGTCACTAGCCTTCCTCAGCCCACCAGCAGCTGTGGCTGCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTGTCACTAGCCTTCCTCAGCCCACCAGCAGCTGTGGCTGCCCC  500

seq1  TAGAGGACAGGATGAGGCTTCTCAGATCTGCTGTCCCACGGTTTGCTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGACAGGATGAGGCTTCTCAGATCTGCTGTCCCACGGTTTGCTTGA  550

seq1  TCAGCTTTCCTTACTACTTGCAGAAAGGGTTTTTGATTTCTAAAATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTCCTTACTACTTGCAGAAAGGGTTTTTGATTTCTAAAATAAAA  600

seq1  ATAGCAATTAAGTGCCACCAGTGCCACCAGGAGACCTCCAAAGGAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATTAAGTGCCACCAGTGCCACCAGGAGACCTCCAAAGGAAGAAA  650

seq1  TAAACAGAAAGAAAGTAGTCACTAACTTTTGTTGAAGTCACTGCAAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGAAAGAAAGTAGTCACTAACTTTTGTTGAAGTCACTGCAAATGG  700

seq1  GGAGAGATATAATATTCACGGATAGAAAAACTCAGTTCTGTTAAGATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATATAATATTCACGGATAGAAAAACTCAGTTCTGTTAAGATGCT  750

seq1  AGTGTTGTTTTGTATTTTGTTTGTTTGGTTGTTGTTGTTGTTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGTTTTGTATTTTGTTTGTTTGGTTGTTGTTGTTGTTTT  794