BAC Information

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BAC

Clone NameB6Ng01-184A11
Chromosome16 (Build37)
Map Location 15,290,518 - 15,291,051
singlet/doubletsinglet
Overlap genenone
Upstream geneMyh11, 0610037P05Rik, Abcc1, Gm1758, Snai2, Efcab1, LOC100042737, LOC665653, LOC385748
Downstream geneLOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010, D16Ertd727e, Pkp2, EG433003
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184A11.bB6Ng01-184A11.g
ACCGA009507GA009508
length950935
definitionB6Ng01-184A11.b B6Ng01-184A11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagcagaggaatctcaactggctgggaagcacttaaagaacta
ttcaaagttcttagttttcagggaaatgcaaatcaaacaacacttagatt
tcatcttacactggtcagaatggctaagaccaaaaactcaagggctacca
catgctgttgaggctatagagcaagaggaacattcctccattgctggtgg
gagtgcaaacctgtacaaccactttggaaatcaatttggtagtttctcag
aaaatggggaatggttctatctcaagacccagctatactacttctgagca
tatacccaaaagatgctctaccatcccacaaagacttgctcaactatgtt
catagcagttttatttgtaatagtcagaaactgaaaacaatctaaatgtc
catcaaccaaagaatggataaagaaaatatggtacatctacacaatggaa
tactattcagttattaaaaataaagacataataaattttgcagtcaaatg
gatgtaacttgagaatatcatcctgagtgaggtaacccagacctaaaagg
acatgcatggtatgtactcacttaaaagtcaatattagccacaaaatata
gaattcccatgtcatactccacagacctaaagaaggaagacccaagtaag
gatgtttgactctcacttagaagagggaataaaatagtcatagaaggcaa
atgggtgaagtgaactagataagaaagggaatggggtatgttgaattggc
atctgagttagccatttatcccaggtttgaaacctaatatctcagccttt
tggttgacaataaatgataaagggggatgtaatctttttatgaccacttc
ctgctgacattgggacatcattgttgaaaactcaagaaagttggaatgct
gaacaaggctgggaagagagaaaaagagggagagaggaggggagggtgtt

gaattcttctgtttccatttgtatgtgggcttttggttttgttgttgttg
ttgttgttgttgctgctgctgctgctattgaagaccagccttagtccatg
gtgatctgataagatgcataggattattttagtcttcttgtatctgtgga
ggcctgttttgtgattgattatatggtcagttgtggagaaggtagtatga
ggtgctgagatgaaggtatattcttttgttttaggataaaatgttctgta
gatatctgttaaatccttttggtctataacttctgttagtttcactgtgt
ctttatttagtttctgtttccattgatgagaatgggattttgaagtctcc
cactattattgtgtgaggtgcaatgtgtgtgctttgagctttagaaatat
ttattttatgatatgggtgccattgcatttggagcatagatgttcagaat
tgtgagttcttctttgtagatttttttctttgatgagtatgaagtgtcct
tcatctttttttgataacttttttgtttgaaaatcaattttactcaatat
tagaatggctaccttagcttgtttcttgggaccacttgcttggaaaatct
gtttccagtgttttactctgaggtagtgtcctgtctttgacactgagatg
tttcctgtatgtaacaaaattctgggtcttgtttacagtctgttagtcta
tatctttttattggagaattgagtccattcatgttaagaaatattaagga
aaagtgattaaacgcttactcttctttttgctgttagaggtgaaattatg
ttttgtgcagctatctttttgggtttgttgaaagaaaattacttttcttg
cttttttctatggtgtaagtttccctccttgtgttggtgtttttccgtct
attaacctttgtaaagcttgatttttggagagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_15290518_15291051
seq2: B6Ng01-184A11.b_460_993 (reverse)

seq1  AACACCCTCCCCTCCTCTCTCCCTCTTTTTCTCTCTTCCCAGCCTTGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCTCCCCTCCTCTCTCCCTCTTTTTCTCTCTTCCCAGCCTTGTTC  50

seq1  AGCATTCCAACTTTCTTGAGTTTTCAACAATGATGTCCCAATGTCAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCCAACTTTCTTGAGTTTTCAACAATGATGTCCCAATGTCAGCAG  100

seq1  GAAGTGGTCATAAAAAGATTACATCCCCCTTTATCATTTATTGTCAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGTCATAAAAAGATTACATCCCCCTTTATCATTTATTGTCAACCA  150

seq1  AAAGGCTGAGATATTAGGTTTCAAACCTGGGATAAATGGCTAACTCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGAGATATTAGGTTTCAAACCTGGGATAAATGGCTAACTCAGAT  200

seq1  GCCAATTCAACATACCCCATTCCCTTTCTTATCTAGTTCACTTCACCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATTCAACATACCCCATTCCCTTTCTTATCTAGTTCACTTCACCCAT  250

seq1  TTGCCTTCTATGACTATTTTATTCCCTCTTCTAAGTGAGAGTCAAACATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCTATGACTATTTTATTCCCTCTTCTAAGTGAGAGTCAAACATC  300

seq1  CTTACTTGGGTCTTCCTTCTTTAGGTCTGTGGAGTATGACATGGGAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTGGGTCTTCCTTCTTTAGGTCTGTGGAGTATGACATGGGAATTC  350

seq1  TATATTTTGTGGCTAATATTGACTTTTAAGTGAGTACATACCATGCATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTGTGGCTAATATTGACTTTTAAGTGAGTACATACCATGCATGT  400

seq1  CCTTTTAGGTCTGGGTTACCTCACTCAGGATGATATTCTCAAGTTACATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAGGTCTGGGTTACCTCACTCAGGATGATATTCTCAAGTTACATC  450

seq1  CATTTGACTGCAAAATTTATTATGTCTTTATTTTTAATAACTGAATAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGACTGCAAAATTTATTATGTCTTTATTTTTAATAACTGAATAGTA  500

seq1  TTCCATTGTGTAGATGTACCATATTTTCTTTATC  534
      ||||||||||||||||||||||||||||||||||
seq2  TTCCATTGTGTAGATGTACCATATTTTCTTTATC  534