BAC Information

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BAC

Clone NameB6Ng01-185A15
Chromosome16 (Build37)
Map Location 40,683,461 - 40,684,686
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667400
Downstream geneEG667450, Lsamp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185A15.bB6Ng01-185A15.g
ACCGA010259GA010260
length1,2111,178
definitionB6Ng01-185A15.b B6Ng01-185A15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaagtggatgccctgaactaggattagaattttactcaaact
taaacaaaatgaaaaacatgagaagattctagaaggctaaaataaagaat
catgaagtaggaaaatttcatgtaaaaaaataacctccaaccatatcctc
cccaaagcctagtggcttttccacattacccagctgagacgaatatcatg
tcaattttccacatgattagacaagactacccagaacaacatagtttaaa
atggtctttacagcaaactttatttatttatttatttatttatttattta
tttttacttactctttttacatcctgttcactgcccctttcctgaacact
ccctcccataatcctttcccatctcccctcccattctcctctgggctaaa
actttattagttttttttttttttaaacattaaaaaagtactcaaggacc
tttggtaaaaattgtctttgaatgatctgctctaagtacactttctactt
cagaataagtaattcatgggggtcaggacatttcctctctcaaacttgcc
ccacccccatttgatgttatcctttaatgctcctttcatctatgaattta
attatcactactaaatagagggaagtcacccttcctatcattttaaatgg
aaactgtcttaaaccatattcagcagtcaatatgaatgaactacataaat
atacttggagagtttcaagtgtttatatctgaaggggagaaaggcgattc
atatatagtattgagatatggggtaaagatatgttgttatttttcctaca
ttactcaaaagataattctttgaaatgtggttgctttcattaaattagaa
gtagttgaattctggaagatcagccaaatggtctagggtgcaacagataa
agtggccataccagagtgtaaaatataaactttaaataaaatggctgtta
tacctcaacatttttatactttataccattttaataatatagggtgatac
agatcatttaatgtaaaaaaaaccttattgagttatcatgtcatgaacat
catgaagattgatattgtggttgtgcataaataaaattaatcacaatatt
agacagaaagtatcataattgggcagttctctagtgagcattctgtattt
ccaagacaataaagatcggtaactagcaatacaaatacttaagcgagtga
tgcagagcttt

gaattctcacctgaggaataccgaatggcagagaagcacccgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcataaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactgctaagaaggacacatgcttcactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacataatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaat
aagaatgaagactgaagtgtggacactatgcacctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaactctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcacctat
aggtgacaacattatgaactaccagtacccggagctctttgactctagct
gcattatgtattcaaaggatgacttagtcgcatccacttgtaagagagtc
catttggaacgctaactttatattggccagttaacaggtactgcccaagg
catataaaaggtgggaagtgtgctgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_40683461_40684686
seq2: B6Ng01-185A15.b_44_1254

seq1  GAATTCATCAAGTGGATGCCCTGAACTAGGATTAGAATTTTACTCAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAAGTGGATGCCCTGAACTAGGATTAGAATTTTACTCAAACT  50

seq1  TAAACAAAATGAAAAACATGAGAAGATTCTAGAAGGCTAAAATAAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAAATGAAAAACATGAGAAGATTCTAGAAGGCTAAAATAAAGAAT  100

seq1  CATGAAGTAGGAAAATTTCATGTAAAAAAATAACCTCCAACCATATCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGTAGGAAAATTTCATGTAAAAAAATAACCTCCAACCATATCCTC  150

seq1  CCCAAAGCCTAGTGGCTTTTCCACATTACCCAGCTGAGACGAATATCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGCCTAGTGGCTTTTCCACATTACCCAGCTGAGACGAATATCATG  200

seq1  TCAATTTTCCACATGATTAGACAAGACTACCCAGAACAACATAGTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTCCACATGATTAGACAAGACTACCCAGAACAACATAGTTTAAA  250

seq1  ATGGTCTTTACAGCAAACTTTATTTATTTATTTATTTATTTATTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTTTACAGCAAACTTTATTTATTTATTTATTTATTTATTTATTTA  300

seq1  TTTTTACTTACTCTTTTTACATCCTGTTCACTGCCCCTTTCCTGAACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTTACTCTTTTTACATCCTGTTCACTGCCCCTTTCCTGAACACT  350

seq1  CCCTCCCATAATCCTTTCCCATCTCCCCTCCCATTCTCCTCTGGGCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCATAATCCTTTCCCATCTCCCCTCCCATTCTCCTCTGGGCTAAA  400

seq1  ACTTTATTAGTTTTTTTTTTTTTTAAACATTAAAAAAGTACTCAAGGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTAGTTTTTTTTTTTTTTAAACATTAAAAAAGTACTCAAGGACC  450

seq1  TTTGGTAAAAATTGTCTTTGAATGATCTGCTCTAAGTACACTTTCTACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAAAAATTGTCTTTGAATGATCTGCTCTAAGTACACTTTCTACTT  500

seq1  CAGAATAAGTAATTCATGGGGGTCAGGACATTTCCTCTCTCAAACTTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAAGTAATTCATGGGGGTCAGGACATTTCCTCTCTCAAACTTGCC  550

seq1  CCACCCCCATTTGATGTTATCCTTTAATGCTCCTTTCATCTATGAATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCCATTTGATGTTATCCTTTAATGCTCCTTTCATCTATGAATTTA  600

seq1  ATTATCACTACTAAATAGAGGGAAGTCACCCTTCCTATCATTTTAAATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCACTACTAAATAGAGGGAAGTCACCCTTCCTATCATTTTAAATGG  650

seq1  AAACTGTCTTAAACCATATTCAGCAGTCAATATGAATGAACTACATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTCTTAAACCATATTCAGCAGTCAATATGAATGAACTACATAAAT  700

seq1  ATACTTGGAGAGTTTCAAGTGTTTATATCTGAAGGGGAGAAAGGCGATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGGAGAGTTTCAAGTGTTTATATCTGAAGGGGAGAAAGGCGATTC  750

seq1  ATATATAGTATTGAGATATGGGGTAAAGATATGTTGTTATTTTTCCTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGTATTGAGATATGGGGTAAAGATATGTTGTTATTTTTCCTACA  800

seq1  TTACTCAAAAGATAATTCTTTGAAATGTGGTTGCTTTCATTAAATTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAAAAGATAATTCTTTGAAATGTGGTTGCTTTCATTAAATTAGAA  850

seq1  GTAGTTGAATTCTGGAAGATCAGCCAAATGGTCTAGGGTGCAACAGATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTGAATTCTGGAAGATCAGCCAAATGGTCTAGGGTGCAACAGATAA  900

seq1  AGTGGCCATACCAGAGTGTAAAATATAAACTTTAAATAAAATGGCTGTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCATACCAGAGTGTAAAATATAAACTTTAAATAAAATGGCTGTTA  950

seq1  TACCTCAACATTTTTATAACTTTATACCATTTTAATAATATTAGGGTGAT  1000
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  TACCTCAACATTTTTAT-ACTTTATACCATTTTAATAATA-TAGGGTGAT  998

seq1  ACAGATCATTTAATGTAAAAAAAACCTATTGGAGTTATCATGTCATGAAC  1050
      |||||||||||||||||||||||||||  | |||||||||||||||||||
seq2  ACAGATCATTTAATGTAAAAAAAACCTTATTGAGTTATCATGTCATGAAC  1048

seq1  ATCATGAAGATTGATAATTGT-GTGTTGCATAAATAAAAATTTTAAAATC  1099
      ||||||||||||||| ||||| ||  ||||||||||||| |     ||||
seq2  ATCATGAAGATTGAT-ATTGTGGTTGTGCATAAATAAAATT-----AATC  1092

seq1  ACATTATTTAGCAGAAAGTATCATAATGGGGCAGTTCTCTAGTGAGCCAT  1149
      ||| ||||   |||||||||||||||| |||||||||||||||||| |||
seq2  ACAATATTAGACAGAAAGTATCATAATTGGGCAGTTCTCTAGTGAG-CAT  1141

seq1  TCTGTATTTCAAAGCATATAAGAATCTGTAATCTTAGGGCAATACAAATT  1199
      |||||||||| |||   ||||  ||| |||| ||    ||||||||||| 
seq2  TCTGTATTTCCAAGACAATAAAGATCGGTAA-CT---AGCAATACAAAT-  1186

seq1  ATCTTAAAGCGA-TGATGCAGTAGCTTT  1226
        ||| |||||| |||||||| ||||||
seq2  -ACTT-AAGCGAGTGATGCAG-AGCTTT  1211


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