MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-185A18
Chromosome	16 (Build37)
Map Location	30,290,327 - 30,413,371
singlet/doublet	doublet
Overlap gene	Gp5, Atp13a3
Upstream gene	Atp13a5, Atp13a4, Opa1, Gm1968, LOC100043102, 9030404E10Rik, Hes1, EG547263, 1700025H01Rik, LOC100043110, Cpn2, Lrrc15
Downstream gene	Tmem44, Lsg1, BC022623, LOC100043122, AI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Atp13a5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268878 MGI:2444068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp13a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224079 MGI:1924456
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Opa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74143 MGI:1921393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1968 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328657 MGI:3584525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043102 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043102
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	9030404E10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71528 MGI:1918778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Hes1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15205 MGI:104853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG547263 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547263 MGI:3643236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 644 ESTs

name	1700025H01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75531 MGI:1922781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100043110 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Cpn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71756 MGI:1919006
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74488 MGI:1921738
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14729 MGI:1096363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp13a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224088 MGI:2685387
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 131 ESTs, 7 Proteins

name	Tmem44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224090 MGI:1924489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lsg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224092 MGI:107236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC022623 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224093 MGI:2676309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043122 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	AI480653 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268880 MGI:2146443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Centb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78618 MGI:1925868
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp1r2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66849 MGI:1914099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apod (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11815 MGI:88056
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700007E05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114672 MGI:2149745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 5 Proteins

name	Atp13a5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802262 GeneID:268878 MGI:2444068
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase type 13A5 transcript_id : NM_175650.3

name	Atp13a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345685 GeneID:224079 MGI:1924456
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase type 13A4 transcript_id : NM_172613.3

name	Opa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130906 GeneID:74143 MGI:1921393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : optic atrophy 1 homolog (human) transcript_id : NM_133752.2

name	Gm1968 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354004 GeneID:328657 MGI:3584525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1968, (NCBI) transcript_id : NM_001033403.2

name	LOC100043102 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267312 GeneID:100043102
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043102 transcript_id : XM_001479498.1

name	9030404E10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400132 GeneID:71528 MGI:1918778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 9030404E10 gene transcript_id : XM_985879.1

name	Hes1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560817 GeneID:15205 MGI:104853
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hairy and enhancer of split 1 (Drosophila) transcript_id : NM_008235.2

name	EG547263 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267510 GeneID:547263 MGI:3643236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 643 ESTs product : predicted gene, EG547263 transcript_id : XM_622656.4

name	1700025H01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267511 GeneID:75531 MGI:1922781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700025H01 gene transcript_id : XM_001480951.1

name	Cpn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348004 GeneID:71756 MGI:1919006
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase N, polypeptide 2 transcript_id : NM_027904.2

name	Lrrc15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037376 GeneID:74488 MGI:1921738
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 15 transcript_id : NM_028973.1

name	Gp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369301 GeneID:14729 MGI:1096363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein 5 (platelet) transcript_id : NM_008148.3

name	Atp13a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267515 GeneID:224088 MGI:2685387
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 128 ESTs, 7 Proteins product : ATPase type 13A3, transcript variant 2 transcript_id : XM_001480961.1

name	Atp13a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267513 GeneID:224088 MGI:2685387
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 127 ESTs, 7 Proteins product : ATPase type 13A3, transcript variant 1 transcript_id : XM_001480958.1

name	Tmem44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:100817929 GeneID:224090 MGI:1924489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 44 transcript_id : NM_172614.3

name	Lsg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353967 GeneID:224092 MGI:107236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : large subunit GTPase 1 homolog (S. cerevisiae) transcript_id : NM_178069.4

name	BC022623 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341258 GeneID:224093 MGI:2676309
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC022623 transcript_id : NM_177632.2

name	AI480653 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38348493 GeneID:268880 MGI:2146443
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI480653 transcript_id : NM_198626.1

name	Centb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677395 GeneID:78618 MGI:1925868
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centaurin, beta 2 transcript_id : NM_030138.2

name	Ppp1r2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85540464 GeneID:66849 MGI:1914099
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 2 transcript_id : NM_025800.3

name	Apod (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131055 GeneID:11815 MGI:88056
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein D transcript_id : NM_007470.3

name	Atp13a5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28316742 CCDS:CCDS28095.1 GeneID:268878 MGI:2444068
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ATPase type 13A5 protein_id : NP_783581.1

name	Atp13a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982093 GeneID:224079 MGI:1924456
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : type V P-type ATPase product : type V P-type ATPase isoform 4 protein_id : NP_766201.2

name	Opa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526960 CCDS:CCDS28096.1 GeneID:74143 MGI:1921393
definition	GO_component : GO:0030425 - dendrite [Evidence IDA]; GO:0030061 - mitochondrial crista [Evidence ISS]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005758 - mitochondrial intermembrane space [Evidence IDA]; GO:0005741 - mitochondrial outer membrane [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence ISS] [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA] [Evidence TAS]; GO:0000287 - magnesium ion binding [Evidence ISS]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019896 - axon transport of mitochondrion [Evidence ISS]; GO:0007007 - inner mitochondrial membrane organization and biogenesis [Evidence ISS]; GO:0000266 - mitochondrial fission [Evidence ISS]; GO:0008053 - mitochondrial fusion [Evidence ISS]; GO:0045768 - positive regulation of anti-apoptosis [Evidence ISS]; GO:0007601 - visual perception [Evidence ISS] codon_start : 1 product : optic atrophy 1 homolog protein_id : NP_598513.1

name	Gm1968 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677462 GeneID:328657 MGI:3584525
definition	codon_start : 1 product : hypothetical protein LOC328657 protein_id : NP_001028575.1

name	LOC100043102 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267313 GeneID:100043102
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479548.1

name	9030404E10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400133 GeneID:71528 MGI:1918778
definition	codon_start : 1 product : hypothetical protein LOC71528 protein_id : XP_990973.1

name	Hes1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680205 CCDS:CCDS28098.1 GeneID:15205 MGI:104853
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA] [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0042491 - auditory receptor cell differentiation [Evidence IMP]; GO:0042668 - auditory receptor cell fate determination [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IGI]; GO:0048469 - cell maturation [Evidence IGI]; GO:0045608 - negative regulation of auditory receptor cell differentiation [Evidence IMP]; GO:0045665 - negative regulation of neuron differentiation [Evidence IMP] [Evidence IGI]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hairy and enhancer of split 1 protein_id : NP_032261.1

name	EG547263 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82959262 GeneID:547263 MGI:3643236
definition	codon_start : 1 product : similar to MGC82151 protein protein_id : XP_622656.2

name	1700025H01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267512 GeneID:75531 MGI:1922781
definition	codon_start : 1 product : hypothetical protein LOC75531 protein_id : XP_001481001.1

name	Cpn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59958377 GeneID:71756 MGI:1919006
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : carboxypeptidase N, polypeptide 2 homolog protein_id : NP_082180.1

name	Lrrc15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037377 CCDS:CCDS28099.1 GeneID:74488 MGI:1921738
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat containing 15 protein_id : NP_083249.1

name	Gp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982322 CCDS:CCDS28100.1 GeneID:14729 MGI:1096363
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA]; GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : glycoprotein V (platelet); GP V product : glycoprotein 5 (platelet) protein_id : NP_032174.2

name	Atp13a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267516 GeneID:224088 MGI:2685387
definition	codon_start : 1 product : ATPase type 13A3 isoform 2 protein_id : XP_001481011.1

name	Atp13a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267514 GeneID:224088 MGI:2685387
definition	codon_start : 1 product : ATPase type 13A3 isoform 1 protein_id : XP_001481008.1

name	Tmem44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:100817930 GeneID:224090 MGI:1924489
definition	codon_start : 1 product : transmembrane protein 44 protein_id : NP_766202.3

name	Lsg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017373 GeneID:224092 MGI:107236
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA] codon_start : 1 product : large subunit GTPase 1 homolog protein_id : NP_835170.1

name	BC022623 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244026 CCDS:CCDS28103.1 GeneID:224093 MGI:2676309
definition	codon_start : 1 product : hypothetical protein LOC224093 protein_id : NP_808300.1

name	AI480653 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348494 GeneID:268880 MGI:2146443
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC268880 protein_id : NP_941028.1

name	Centb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62079289 GeneID:78618 MGI:1925868
definition	GO_component : GO:0001726 - ruffle [Evidence ISS] GO_function : GO:0008060 - ARF GTPase activator activity [Evidence ISS] GO_process : GO:0030029 - actin filament-based process [Evidence ISS]; GO:0043087 - regulation of GTPase activity [Evidence IEA] codon_start : 1 product : centaurin, beta 2 protein_id : NP_084414.1

name	Ppp1r2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18859587 CCDS:CCDS28104.1 GeneID:66849 MGI:1914099
definition	GO_function : GO:0019212 - phosphatase inhibitor activity [Evidence IEA]; GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0005977 - glycogen metabolism [Evidence IEA]; GO:0009966 - regulation of signal transduction [Evidence IEA] codon_start : 1 note : protein phosphatase inhibitor 2 product : protein phosphatase 1, regulatory (inhibitor) subunit 2 protein_id : NP_080076.1

name	Apod (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677437 CCDS:CCDS28105.1 GeneID:11815 MGI:88056
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : apolipoprotein D protein_id : NP_031496.2

name	LOC100043110 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043110
definition	number : 1 pseudo : _no_value

name	LOC100043122 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043122
definition	number : 1 pseudo : _no_value

name	LOC100043122 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043122
definition	number : 2 pseudo : _no_value

name	1700007E05Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94400155 GeneID:114672 MGI:2149745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 5 Proteins product : RIKEN cDNA 1700007E05 gene transcript_id : XR_002317.1

clone name	MSMg01-543O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174I11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-185A18.b	B6Ng01-185A18.g
ACC	GA010265	GA010266
length	505	1,101
definition	B6Ng01-185A18.b	B6Ng01-185A18.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(30,412,861 - 30,413,371)	(30,290,327 - 30,291,431)
sequence	cagttactggaattactgtaccacactacaatgccacaatgcctggcttc ttgtggattctttttgaaatctggggtgaccaatggacagaggcagctat atagaagagaccccacacacacccatcacacacacacacacacacacaca cacacacacacactttttcatgttcccttccatgtggcactctgaaatag ctccctctgcaaggcttccaagatcgtctcccatggatcgactctctttc aagaaactttgggaactggaaccacagaacatcgtgtgcagtgttgtttg acttagcctggctgccttccactggctggttcctgctctgctttgttttt ttttcacaaccttctgaaagaaaggggaggttgtttcaaaagttcactgt ccttaaccctggcaccagagatggagacctgtgaaaccagaaccttgatg gacacagtccagcagagcctgtgtgtaccaatgggtgatgggggtggagt gggga	gaattcactcggtcctggctttctgtgggtctggaggaatataataggcg tcttccatcacagtctcctatggatttttaaagaaccgagaagtcaacat gcccatagatgagataagagtgtctactggagaggtggggaccgagaaaa ggaagatggagcgaatggctgtgaaggccggcccagcagcctggtacagg gctgcagttgcagagaggacccatgctactgatggcatcggcccagcagc ctggtacagggctgcagttgcagagaggacccatgctactgatggcatca agactcaactcttcaagtcctcaccctccctctctgagccttcctgcccc aagccatgagcttccctagcaaccgcctcgcctgattaaccaggagctag aagataaatgaggtgtgagagccaagtgcaggaccctggctcagcagctg agtgggagcgccttgagctccccagctttcatgcccctaggactgatggt ctcagcaactgagagcacaggtaaccttggaggaagtgactggatcgcgc cttgctgtgccagaggggctgaatttgggctacatgaagttcacctgcac atctctcaacagtagggtgcttgtgataactgcttcgtcagaggatttca tcctgtgtaaacatcaggggttatttgcacatatttagaaggctaagtca tggaagatacaatctgagggaactactggccatatgtatggcatatatat ggtttgacataaacatcacatgtggtgcatgactgtgtcaggtgccacgc tcaagttgaagagggatgccagaaatactgaaaatatatagaataatgat aatgggacaaacaagcagacagccaccttcttaatatccttagcgacaac tcccagactcatccccagcccatacccagttattagtggtgtttctccag agatgagtttcctaagactgttctgggttctctcggcatgtgcttctcat gatgatgagtgcagagttcatgggtgctcagagctgtttgctcgactggg gaagctgggctgtggttgaggtaaagtgtctcgcatgagaaagccaaccc c
quality values	Open. Hide. 39 22 62 62 47 51 47 62 62 62 47 51 47 49 62 62 62 62 62 62 62 59 43 59 59 62 59 59 46 51 46 43 49 48 29 28 56 51 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 59 62 62 62 62 62 62 59 62 62 62 54 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 54 62 62 62 62 62 62 62 62 62 62 62 59 56 48 54 56 62 62 62 54 62 56 54 54 54 48 54 33 54 50 62 59 54 50 54 49 54 62 62 62 59 49 59 56 42 54 56 62 62 54 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 47 54 62 62 62 62 54 62 62 62 62 47 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 41 62 62 46 62 62 62 62 47 62 62 62 62 62 52 62 62 52 62 43 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 47 46 46 49 39 58 58 58 58 58 54 58 49 58 58 54 58 58 54 48 22	Open. Hide. 46 36 56 43 62 33 39 47 62 56 36 28 49 30 32 25 27 22 25 50 56 49 56 44 44 59 62 62 62 62 62 62 62 62 59 59 62 59 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 59 51 56 49 45 40 56 48 56 56 59 62 62 54 54 54 59 62 62 62 54 49 49 59 59 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 59 62 62 62 62 62 62 62 59 59 62 62 59 59 17 18 19 25 13 24 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 54 62 59 62 62 54 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 37 37 46 49 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 49 54 62 62 62 54 62 62 62 62 62 48 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 58 46 58 54 58 58 58 46 58 58 58 58 54 58 58 52 58 58 54 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 42 58 52 41 48 54 58 54 58 54 58 58 49 58 58 54 54 48 58 48 58 58 54 52 54 58 58 41 58 58 58 46 54 58 58 58 51 54 58 58 41 58 58 58 54 49 58 51 51 50 48 58 24 58 58 58 51 51 50 49 47 49 58 58 58 58 48 58 54 52 58 50 51 58 58 58 50 58 51 41 47 51 58 54 58 51 42 50 52 58 54 58 50 58 50 53 51 49 49 50 50 58 28 58 33 42 58 50 58 54 58 50 50 54 32 58 47 46 58 58 53 52 54 53 41 53 53 52 35 58 14 50 41 24 49 53 53 37 51 51 52 50 54 39 58 49 40 58 40 51 38 51 49 45 17 54 54 49 44 39 28 29 54 54 47 40 34 47 42 53 42 54 54 49 40 45 53 46 22 54 37 51 29 38 35 53 53 32 42 54 54 50 54 32 53 32 37 38 19 51 51 53 52 41 51 20 54 21 35 36 37 53 40 41 37 54 42 33 31 37 41 46 51 54 45 45 45 54 54 27 37 42 53 41 41 53 32 32 46 18 6 40 33 35 35 23 31 34 45 47 30 41 33 52 37 45 32 32 34 53 41 45 53 28 53 29 45 31 32 31 16 31 45 32 36 53 34 10 13 22 31 36 21 40 19 31 32 37 42 28 20 31 29 42 38 31 31 34 26 51 26 46 41 32 31 33 14 17 18 21 48 51 30 30 24 34 31 37 35 48 46 41 31 24 37 30 37 31 30 29 33 31 28 28 18 35 29 28 21 33 31 42 48 31 22 18 33 42 31 30 29 29 31 31 31 25 32 23 34 33 24 46 25 31 31 41 35 21 32 7 10 23 18 9 18 15 22 36 37 27 26 27 23 30 26 17 17 29 31 25 38 29 32 24 38 23 30 26 25 34 31 41 28 25 28 31 24 22 12 7 18 21 25 38 27 11 9 22 24 21 16 27 15 11 31 38 32 25 32 25 44 18 19 7 5 43 19 11 12 6 19 16 21 34 14 33 43 30 12 18 15 15 15 7 33 27 15 8 19 7 17 19 29 19 13 5 5 6 14 31 32 14 8 19 15 30 21 7 5 8 17 7 7 24 4 10 33 32 24 21 13 28 29 28 21 24 7 10 14 14 27 7 19 9 9 13 11 7 7 17 27 15 4 9 16 17 27 5 5 6 5 3 7 9 15 28 24 20 14 5 6 5 3 10 24 21 47 40 16 7 14 5 13 5 4 2 4 4 9 12 9 9 12 3 5 7 3 5 2 2 8 6 5 4 4 4 23 17 9 4 4 12 20 14 16 4 3 7 24 22 6 13 5 14 4 15 11 14 20

Alignment Information

BAC End 1

BAC End 2

seq1: chr16_30412861_30413371
seq2: B6Ng01-185A18.b_44_554 (reverse)

seq1  TCCCCACTCCACCCCCATCACCCATTGGTACACACAGGCTCTGCTGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACTCCACCCCCATCACCCATTGGTACACACAGGCTCTGCTGGACT  50

seq1  GTGTCCATCAAGGTTCTGGTTTCACAGGTCTCCATCTCTGGTGCCAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCATCAAGGTTCTGGTTTCACAGGTCTCCATCTCTGGTGCCAGGGT  100

seq1  TAAGGACAGTGAACTTTTGAAACAACCTCCCCTTTCTTTCAGAAGGTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACAGTGAACTTTTGAAACAACCTCCCCTTTCTTTCAGAAGGTTGT  150

seq1  GAAAAAAAAACAAAGCAGAGCAGGAACCAGCCAGTGGAAGGCAGCCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAACAAAGCAGAGCAGGAACCAGCCAGTGGAAGGCAGCCAGGC  200

seq1  TAAGTCAAACAACACTGCACACGATGTTCTGTGGTTCCAGTTCCCAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCAAACAACACTGCACACGATGTTCTGTGGTTCCAGTTCCCAAAGT  250

seq1  TTCTTGAAAGAGAGTCGATCCATGGGAGACGATCTTGGAAGCCTTGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAAAGAGAGTCGATCCATGGGAGACGATCTTGGAAGCCTTGCAGA  300

seq1  GGGAGCTATTTCAGAGTGCCACATGGAAGGGAACATGAAAAAGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTATTTCAGAGTGCCACATGGAAGGGAACATGAAAAAGTGTGTGT  350

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGGTGTGTGTGGGGTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGGTGTGTGTGGGGTCTCT  400

seq1  TCTATATAGCTGCCTCTGTCCATTGGTCACCCCAGATTTCAAAAAGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATAGCTGCCTCTGTCCATTGGTCACCCCAGATTTCAAAAAGAATC  450

seq1  CACAAGAAGCCAGGCATTGTGGCATTGTAGTGTGGTACAGTAATTCCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAAGCCAGGCATTGTGGCATTGTAGTGTGGTACAGTAATTCCAGT  500

seq1  AACTGGAATTC  511
      |||||||||||
seq2  AACTGGAATTC  511

seq1: chr16_30290327_30291431
seq2: B6Ng01-185A18.g_62_1162

seq1  GAATTCACTCGGTCCTGGCTTTCTGTGGGTCTGGAGGAATATAATAGGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCGGTCCTGGCTTTCTGTGGGTCTGGAGGAATATAATAGGCG  50

seq1  TCTTCCATCACAGTCTCCTATGGATTTTTAAAGAACCGAGAAGTCAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATCACAGTCTCCTATGGATTTTTAAAGAACCGAGAAGTCAACAT  100

seq1  GCCCATAGATGAGATAAGAGTGTCTACTGGAGAGGTGGGGACCGAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATAGATGAGATAAGAGTGTCTACTGGAGAGGTGGGGACCGAGAAAA  150

seq1  GGAAGATGGAGCGAATGGCTGTGAAGGCCGGCCCAGCAGCCTGGTACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATGGAGCGAATGGCTGTGAAGGCCGGCCCAGCAGCCTGGTACAGG  200

seq1  GCTGCAGTTGCAGAGAGGACCCATGCTACTGATGGCATCGGCCCAGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGTTGCAGAGAGGACCCATGCTACTGATGGCATCGGCCCAGCAGC  250

seq1  CTGGTACAGGGCTGCAGTTGCAGAGAGGACCCATGCTACTGATGGCATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACAGGGCTGCAGTTGCAGAGAGGACCCATGCTACTGATGGCATCA  300

seq1  AGACTCAACTCTTCAAGTCCTCACCCTCCCTCTCTGAGCCTTCCTGCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAACTCTTCAAGTCCTCACCCTCCCTCTCTGAGCCTTCCTGCCCC  350

seq1  AAGCCATGAGCTTCCCTAGCAACCGCCTCGCCTGATTAACCAGGAGCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATGAGCTTCCCTAGCAACCGCCTCGCCTGATTAACCAGGAGCTAG  400

seq1  AAGATAAATGAGGTGTGAGAGCCAAGTGCAGGACCCTGGCTCAGCAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAATGAGGTGTGAGAGCCAAGTGCAGGACCCTGGCTCAGCAGCTG  450

seq1  AGTGGGAGCGCCTTGAGCTCCCCAGCTTTCATGCCCCTAGGACTGATGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAGCGCCTTGAGCTCCCCAGCTTTCATGCCCCTAGGACTGATGGT  500

seq1  CTCAGCAACTGAGAGCACAGGTAACCTTGGAGGAAGTGACTGGATCGCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAACTGAGAGCACAGGTAACCTTGGAGGAAGTGACTGGATCGCGC  550

seq1  CTTGCTGTGCCAGAGGGGCTGAATTTGGGCTACATGAAGTTCACCTGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGTGCCAGAGGGGCTGAATTTGGGCTACATGAAGTTCACCTGCAC  600

seq1  ATCTCTCAACAGTAGGGTGCTTGTGATAACTGCTTCGTCAGAGGATTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCAACAGTAGGGTGCTTGTGATAACTGCTTCGTCAGAGGATTTCA  650

seq1  TCCTGTGTAAACATCAGGGGTTATTTGCACATATTTAGAAGGCTAAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTAAACATCAGGGGTTATTTGCACATATTTAGAAGGCTAAGTCA  700

seq1  TGGAAGATACAATCTGAGGGAACTACTGGCCATATGTATGGCATATATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGATACAATCTGAGGGAACTACTGGCCATATGTATGGCATATATAT  750

seq1  GG-TTGACATAAACATCACATGTGGTGCATGACTGTGTCAGGTGCCACGC  799
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGACATAAACATCACATGTGGTGCATGACTGTGTCAGGTGCCACGC  800

seq1  TCAAGTTGAAGAGGGATGCCAGAAATACTGAAAATATATAGAATAATGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGAAGAGGGATGCCAGAAATACTGAAAATATATAGAATAATGAT  850

seq1  AATGGGACAAACAAGCAGACAGCCACCTTCTTAATATCCTTAGCGACAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGACAAACAAGCAGACAGCCACCTTCTTAATATCCTTAGCGACAAC  900

seq1  TCCCAGACTCATCCCCAGCCCATACCCAGTTATTAGTGGTGTTTCTCCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGACTCATCCCCAGCCCATACCCAGTTATTAGTGGTGTTTCTCCAG  950

seq1  AGATGAGTTTCCTAAGACTGTTCTGGG-TCTCTCGGCATGTGCTCCTCAT  998
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  AGATGAGTTTCCTAAGACTGTTCTGGGTTCTCTCGGCATGTGCTTCTCAT  1000

seq1  GATGATGAGTGCAGAG-TCATGGGTGCTCCAGGAGGCTGTTTGCTCCGAC  1047
      |||||||||||||||| ||||||||||| |||   |||||||||| ||||
seq2  GATGATGAGTGCAGAGTTCATGGGTGCT-CAG--AGCTGTTTGCT-CGAC  1046

seq1  TGGGGAGCCTGGGGCTGTGGGTGGAGGGGAGAGTGTCTCGCAATGAGAAA  1097
      ||||||  || ||||||||| ||   || | |||||||||| ||||||||
seq2  TGGGGAAGCT-GGGCTGTGGTTG--AGGTAAAGTGTCTCGC-ATGAGAAA  1092

seq1  G-CAACCCC  1105
      | |||||||
seq2  GCCAACCCC  1101

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information