BAC Information

Click to search

BAC

Clone NameB6Ng01-185F23
Chromosome16 (Build37)
Map Location 37,095,354 - 37,096,152
singlet/doubletsinglet
Overlap genePolq
Upstream geneCsta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246, Slc15a2, LOC667023, Eaf2, Iqcb1, LOC628101, Golgb1, Hcls1, Fbxo40, LOC100043252
Downstream geneStxbp5l, Gtf2e1, Rabl3, Hgd, Ndufb4, LOC100043709, Fstl1, LOC100043264, Lrrc58, Gpr156, LOC100043271, LOC100043713, Gsk3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185F23.bB6Ng01-185F23.g
ACCGA010505GA010506
length1,003807
definitionB6Ng01-185F23.b B6Ng01-185F23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgtcccaaccagtaagaaggacacatgctccactat
gttcatagcagccttgtttataatagctagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaacactactcagctattaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggtatcatcctgagtgaggtaacccaatcacaaagg
aactcgcacaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaacttgccaaacgcatgaaattcaaga
agaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaac
aaaacacccatggaaggagttacagagacaaaatttggagctgtgacaaa
aggatggaccatctagtgattgccatatgcagggatccatcccataatca
gcttccaaatgctgacaccattgcatacactagcaagattttgctgaacg
gccccagatatagctctctcttgtgagactatgtcggggcctagcaaata
cagaagtgggatgatcacagtcagctattggatgggtcacacggccccca
atggacgagctagagaaatttacccaaaggagctaaagggaactgcaacc
cta
gaattctttaagactggtggatttgggggtgggaatacttccttggactc
tcatatttgtactttgtaatgagatataggcatatggacatatcaggctg
gtatacagaataggacgtgagggctgggctgagctttaaggttagctaag
gtggtataaagtcaggtggacacagtgggctgtgctggtacatgggatat
acacattagtccctgtctagaatttggagcacaggtctggaggaggtggt
aaggaaggtgtggagggagaatcatatagattcactggcttcaacccact
agaaaactgagagcagtacagattttcttcttgagaaacacagtatagct
gattatacatatatatgtgtgtgtgtgtctatatatgatataatatccca
aggaataatgaaacaggggtggcagttcatgcctataaattcatcattta
agaatggaggagtcaggactgagagtttggggccatcttctgcccccttc
ctctcccttcccatccatccaactgtatctgatgaagcaagtatctcttt
ttcatcatgattaacacacacaaaaaaatcctctgataaagtacaaaggt
ttctgatactcttcgaccaaatagatttttaaaaattaaaaacattaata
taaattcccataaatttattttgaacagcaaaaagatatattagttatga
gtaaagaaatcccaatgtttttaagccttgagaattctctttcatatcat
accacaaaatacaggcactaaggggctagctatcaaagtggctttttcct
tggcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_37095354_37096152
seq2: B6Ng01-185F23.g_65_871 (reverse)

seq1  CAGGCC-AGGAAAACGCCCCTTTGCTAGCTAGCCCCTTAGTGCCTGTA-T  48
      |||||| ||||||| ||| ||||| ||||||||||||||||||||||| |
seq2  CAGGCCAAGGAAAAAGCCACTTTGATAGCTAGCCCCTTAGTGCCTGTATT  50

seq1  TTGTGGTATGATATG-AAGAGAATTCTC-AGGCTT-AAAACATT-GGATT  94
      ||||||||||||||| |||||||||||| |||||| |||||||| |||||
seq2  TTGTGGTATGATATGAAAGAGAATTCTCAAGGCTTAAAAACATTGGGATT  100

seq1  TCTTTACTCATAACTAATATATCTTTTTGCTGTTC-AAATAAATTTATGG  143
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCTTTACTCATAACTAATATATCTTTTTGCTGTTCAAAATAAATTTATGG  150

seq1  GAATTTATATTAATGTTTTTAATTTTTAAAAATCTATTTGGTCGAAGAGT  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTATATTAATGTTTTTAATTTTTAAAAATCTATTTGGTCGAAGAGT  200

seq1  ATCAGAAACCTTTGTACTTTATCAGAGGATTTTTTTGTGTGTGTTAATCA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAACCTTTGTACTTTATCAGAGGATTTTTTTGTGTGTGTTAATCA  250

seq1  TGATG-AAAAGAGATACTTGCTTCATCAGATACAGTTGGATGGATGGGAA  292
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAAAAGAGATACTTGCTTCATCAGATACAGTTGGATGGATGGGAA  300

seq1  GGGAGAGGAAGGGGGCAGAAGATGGCCCCAAACTCTCAGTCCTGACTCCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGAAGGGGGCAGAAGATGGCCCCAAACTCTCAGTCCTGACTCCT  350

seq1  CCATTCTTAAATGATGAATTTATAGGCATGAACTGCCACCCCTGTTTCAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTAAATGATGAATTTATAGGCATGAACTGCCACCCCTGTTTCAT  400

seq1  TATTCCTTGGGATATTATATCATATATAGACACACACACACATATATATG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTTGGGATATTATATCATATATAGACACACACACACATATATATG  450

seq1  TATAATCAGCTATACTGTGTTTCTCAAGAAGAAAATCTGTACTGCTCTCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCAGCTATACTGTGTTTCTCAAGAAGAAAATCTGTACTGCTCTCA  500

seq1  GTTTTCTAGTGGGTTGAAGCCAGTGAATCTATATGATTCTCCCTCCACAC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTAGTGGGTTGAAGCCAGTGAATCTATATGATTCTCCCTCCACAC  550

seq1  CTTCCTTACCACCTCCTCCAGACCTGTGCTCCAAATTCTAGACAGGGACT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTACCACCTCCTCCAGACCTGTGCTCCAAATTCTAGACAGGGACT  600

seq1  AATGTGTATATCCCATGTACCAGCACAGCCCACTGTGTCCACCTGACTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTATATCCCATGTACCAGCACAGCCCACTGTGTCCACCTGACTTT  650

seq1  ATACCACCTTAGCTAACCTTAAAGCTCAGCCCAGCCCTCACGTCCTATTC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACCTTAGCTAACCTTAAAGCTCAGCCCAGCCCTCACGTCCTATTC  700

seq1  TGTATACCAGCCTGATATGTCCATATGCCTATATCTCATTACAAAGTACA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACCAGCCTGATATGTCCATATGCCTATATCTCATTACAAAGTACA  750

seq1  AATATGAGAGTCCAAGGAAGTATTCCCACCCCCAAATCCACCAGTCTTAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAGAGTCCAAGGAAGTATTCCCACCCCCAAATCCACCAGTCTTAA  800

seq1  AGAATTC  799
      |||||||
seq2  AGAATTC  807