BAC Information

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BAC

Clone NameB6Ng01-187E11
Chromosome16 (Build37)
Map Location 59,120,522 - 59,257,143
singlet/doubletdoublet
Overlap geneOlfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1
Upstream geneLOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194
Downstream geneOlfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6, Epha6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187E11.bB6Ng01-187E11.g
ACCGA011897GA011898
length1,1871,007
definitionB6Ng01-187E11.b B6Ng01-187E11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,120,522 - 59,121,700)(59,256,137 - 59,257,143)
sequence
gaattcacatgactgagctccaatttctggtctataagcacctaactgtg
tttccataaggactgagagtatcagaccagatatttcatagatattcttt
tcaaatcagtactgctttttactgcattttgaagataaatcctctcaaca
gatatattccttgtatattagcacttttatgaaaaaaatagtattaaacg
attctactttaaaaaaaattaccttcaaataaagtactgtaccctcacct
aatcctggtacagagatgggtggatgtgtatatgcaatggaaattaaaac
atcatgaagaactcttaagatgaaggacaaagatagcacagacaattgct
ctcttcaagttaatcttctttaagagaggttgggatagaaagatattttt
ttcacatcttaaatgctatctgtgatgttaacaatgaaattccctcaatg
ctatgaaaagaatcccagtagaatagccagtccccaggtattttgcaaaa
attaagaagttactgctagggagcctattataacaattgtttctcatgtt
ttctttctttcaaaaacaaaagcattacaaattaaaaataataaaaatgt
atttcattgagatccttctggacttttagatgtaactgactttccaggta
aatttggtttaggataaaaacaactgactacaagttctggagggagtgtg
ggacaaagggaaccctccttcactattgatgaggttgcaaacttctttag
cctgtgtgtaactaactatgcttgtagagcttaaatgattattttccata
tgagattttgacacttccttcaagagccaaagaccatctaacaaaaacct
caacatcagacaggagatgccttcatttgagttattggtcagagtttcta
aaattttccaagaaaaaaaaaaacatttttaggctattactgttgctctt
tgttgcatccaagaagtagaaggtaagcccctatcactgaagataccgtg
cctgagctagaactgacctgaaagccttcctcccctgaagaaatagggaa
tcatgattcagatgtagcatgtaagtttcaaacggaaggggaggcaattc
agtaatccttacgtaagaatgatgtctatggacccacaaccagtgaaccg
catgtacaaataaggtatagggaagtactggggaaca
gaattcataaagaaaatcaaatttgttaattcaggacaaaattctcatat
aattctcaaagtaaagcatttaacaattaatataaaaaagaggccatgac
tttgaaaaagcaagttggagtacgtgggaggatttagagagtggaatggg
aagaaagaattactgtgattatattataatctgaaaaataacagttataa
taacattataggtttgttcatgtaatgtttctttcagtataattcatagt
taaggattttgaaactcgttcattcttcctgaactttcaggaaaaataaa
ctgacgtctcacaattggttacttatggtgatttttaactttcaaagaga
tagcatctacttatatttaaaaattgcataaggcctgtttttatattgtt
ttctcatagtaaaatatttttatattactcaagcatcagtagtatgactc
tataaataagaaagttagcacttgtagaaataacatagcaacgtgtatat
atacttccaaaaatattttttccttttcaaaaatcataagcaaaacagta
gcacccatttgcaaacccagcccttaggtgacagaggcagaagaatcact
gtgtgttcaagaattaatctacaaagcaagtttcaagccaccaaacacta
cagagtcagaccgtatatcaagaagaaaaaaaaaaaggaaaccttgagtt
tcttcagatactataggtcgtgaataaacccttgatttcatagaaatggt
aaaatttgcattcataaatggtgacaagacattcagaaaaaatggaataa
aaaatatctctttaaaacttttacagcatttgaattcaaaacatatacta
taccagaattgttataaccttgtcacactgaaaatattttttgttaaatt
atccatattgagtgattttttgaaggacatactgtgtatatataagtaga
tatataagtactgaatatattgtgtttatatgtttcaggtataaaatata
ttgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_59120522_59121700
seq2: B6Ng01-187E11.b_45_1231

seq1  GAATTCACATGACTGAGCTCCAATTTCTGGTCTATAAGCACCTAACTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGACTGAGCTCCAATTTCTGGTCTATAAGCACCTAACTGTG  50

seq1  TTTCCATAAGGACTGAGAGTATCAGACCAGATATTTCATAGATATTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATAAGGACTGAGAGTATCAGACCAGATATTTCATAGATATTCTTT  100

seq1  TCAAATCAGTACTGCTTTTTACTGCATTTTGAAGATAAATCCTCTCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCAGTACTGCTTTTTACTGCATTTTGAAGATAAATCCTCTCAACA  150

seq1  GATATATTCCTTGTATATTAGCACTTTTATGAAAAAAATAGTATTAAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATTCCTTGTATATTAGCACTTTTATGAAAAAAATAGTATTAAACG  200

seq1  ATTCTACTTTAAAAAAAATTACCTTCAAATAAAGTACTGTACCCTCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACTTTAAAAAAAATTACCTTCAAATAAAGTACTGTACCCTCACCT  250

seq1  AATCCTGGTACAGAGATGGGTGGATGTGTATATGCAATGGAAATTAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGGTACAGAGATGGGTGGATGTGTATATGCAATGGAAATTAAAAC  300

seq1  ATCATGAAGAACTCTTAAGATGAAGGACAAAGATAGCACAGACAATTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAAGAACTCTTAAGATGAAGGACAAAGATAGCACAGACAATTGCT  350

seq1  CTCTTCAAGTTAATCTTCTTTAAGAGAGGTTGGGATAGAAAGATATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAAGTTAATCTTCTTTAAGAGAGGTTGGGATAGAAAGATATTTTT  400

seq1  TTCACATCTTAAATGCTATCTGTGATGTTAACAATGAAATTCCCTCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATCTTAAATGCTATCTGTGATGTTAACAATGAAATTCCCTCAATG  450

seq1  CTATGAAAAGAATCCCAGTAGAATAGCCAGTCCCCAGGTATTTTGCAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAAAGAATCCCAGTAGAATAGCCAGTCCCCAGGTATTTTGCAAAA  500

seq1  ATTAAGAAGTTACTGCTAGGGAGCCTATTATAACAATTGTTTCTCATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAGTTACTGCTAGGGAGCCTATTATAACAATTGTTTCTCATGTT  550

seq1  TTCTTTCTTTCAAAAACAAAAGCATTACAAATTAAAAATAATAAAAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCAAAAACAAAAGCATTACAAATTAAAAATAATAAAAATGT  600

seq1  ATTTCATTGAGATCCTTCTGGACTTTTAGATGTAACTGACTTTCCAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTGAGATCCTTCTGGACTTTTAGATGTAACTGACTTTCCAGGTA  650

seq1  AATTTGGTTTAGGATAAAAACAACTGACTACAAGTTCTGGAGGGAGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGTTTAGGATAAAAACAACTGACTACAAGTTCTGGAGGGAGTGTG  700

seq1  GGACAAAGGGAACCCTCCTTCACTATTGATGAGGTTGCAAACTTCTTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAGGGAACCCTCCTTCACTATTGATGAGGTTGCAAACTTCTTTAG  750

seq1  CCTGTGTGTAACTAACTATGCTTGTAGAGCTTAAATGATTATTTTCCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGTAACTAACTATGCTTGTAGAGCTTAAATGATTATTTTCCATA  800

seq1  TGAGATTTTGACACTTCCTTCAAGAGCCAAAGACCATCTAACAAAAACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTTTGACACTTCCTTCAAGAGCCAAAGACCATCTAACAAAAACCT  850

seq1  CAACATCAGACAGGAGATGCCTTCATTTGAGTTATTGGTCAGAGTTTTCT  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAACATCAGACAGGAGATGCCTTCATTTGAGTTATTGGTCAGAG-TTTCT  899

seq1  AAAATTTTCCAAG-AAAAAAAAAACA-TTTTAGGCTATTACTGTTGCTCT  948
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  AAAATTTTCCAAGAAAAAAAAAAACATTTTTAGGCTATTACTGTTGCTCT  949

seq1  TTGTTGCATCCAAGAGGTAGAAGGTAAGCCCCTATCACTGAAGATACCGT  998
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGTTGCATCCAAGAAGTAGAAGGTAAGCCCCTATCACTGAAGATACCGT  999

seq1  GCCTGAGCTAGAACTGACCTGAAAGCC-TCCTCCCCTGA--GAATAGGAA  1045
      ||||||||||||||||||||||||||| |||||||||||   |||||| |
seq2  GCCTGAGCTAGAACTGACCTGAAAGCCTTCCTCCCCTGAAGAAATAGGGA  1049

seq1  ATCATGATTCCAGAAGGTAGCATGTAAGTTTCAAAAGGA--GGGAAGCAA  1093
      ||||||||| ||| | ||||||||||||||||||| |||  |||| ||||
seq2  ATCATGATT-CAG-ATGTAGCATGTAAGTTTCAAACGGAAGGGGAGGCAA  1097

seq1  TCCA-TAATCC-TACGTAGGAATGATGTCTAT-GAACCACAA-CAATGAC  1139
      | || |||||| |||||| ||||||||||||| || |||||| || ||| 
seq2  TTCAGTAATCCTTACGTAAGAATGATGTCTATGGACCCACAACCAGTGAA  1147

seq1  CAGCATGGTAAAATAAGGTAATAGGGAAGTACT-GGGAACA  1179
      | |||||   ||||||||| ||||||||||||| |||||||
seq2  CCGCATGTACAAATAAGGT-ATAGGGAAGTACTGGGGAACA  1187

seq1: chr16_59256137_59257143
seq2: B6Ng01-187E11.g_63_1069 (reverse)

seq1  CACACACATATA-TATATACCT-AAACATATAAACACAATATATTCAGTA  48
      |||||| ||||| | ||||||| |||||||||||||||||||||||||||
seq2  CACACA-ATATATTTTATACCTGAAACATATAAACACAATATATTCAGTA  49

seq1  CTTATAATATCTACTTATATATACACAGTATGTCCTTAAAAAAATCACTC  98
      ||||| ||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTTAT-ATATCTACTTATATATACACAGTATGTCCTTCAAAAAATCACTC  98

seq1  AATATGGATAATTTAACAAAAAATATTTTCAGTGTGACAAGGTTATAACA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGATAATTTAACAAAAAATATTTTCAGTGTGACAAGGTTATAACA  148

seq1  ATTCTGGTATAGTATATGTTTTGAATTCAAATGCTGTAAAAGTTTTAAAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGTATAGTATATGTTTTGAATTCAAATGCTGTAAAAGTTTTAAAG  198

seq1  AGATATTTTTTATTCCATTTTTTCTGAATGTCTTGTCACCATTTATGAAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTTTTATTCCATTTTTTCTGAATGTCTTGTCACCATTTATGAAT  248

seq1  GCAAATTTTACCATTTCTATGAAATCAAGGGTTTATTCACGACCTATAGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTTTACCATTTCTATGAAATCAAGGGTTTATTCACGACCTATAGT  298

seq1  ATCTGAAGAAACTCAAGGTTTCCTTTTTTTTTTTCTTCTTGATATACGGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGAAACTCAAGGTTTCCTTTTTTTTTTTCTTCTTGATATACGGT  348

seq1  CTGACTCTGTAGTGTTTGGTGGCTTGAAACTTGCTTTGTAGATTAATTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCTGTAGTGTTTGGTGGCTTGAAACTTGCTTTGTAGATTAATTCT  398

seq1  TGAACACACAGTGATTCTTCTGCCTCTGTCACCTAAGGGCTGGGTTTGCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACACAGTGATTCTTCTGCCTCTGTCACCTAAGGGCTGGGTTTGCA  448

seq1  AATGGGTGCTACTGTTTTGCTTATGATTTTTGAAAAGGAAAAAATATTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTGCTACTGTTTTGCTTATGATTTTTGAAAAGGAAAAAATATTTT  498

seq1  TGGAAGTATATATACACGTTGCTATGTTATTTCTACAAGTGCTAACTTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTATATATACACGTTGCTATGTTATTTCTACAAGTGCTAACTTTC  548

seq1  TTATTTATAGAGTCATACTACTGATGCTTGAGTAATATAAAAATATTTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATAGAGTCATACTACTGATGCTTGAGTAATATAAAAATATTTTA  598

seq1  CTATGAGAAAACAATATAAAAACAGGCCTTATGCAATTTTTAAATATAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGAAAACAATATAAAAACAGGCCTTATGCAATTTTTAAATATAAG  648

seq1  TAGATGCTATCTCTTTGAAAGTTAAAAATCACCATAAGTAACCAATTGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCTATCTCTTTGAAAGTTAAAAATCACCATAAGTAACCAATTGTG  698

seq1  AGACGTCAGTTTATTTTTCCTGAAAGTTCAGGAAGAATGAACGAGTTTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTCAGTTTATTTTTCCTGAAAGTTCAGGAAGAATGAACGAGTTTCA  748

seq1  AAATCCTTAACTATGAATTATACTGAAAGAAACATTACATGAACAAACCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTAACTATGAATTATACTGAAAGAAACATTACATGAACAAACCT  798

seq1  ATAATGTTATTATAACTGTTATTTTTCAGATTATAATATAATCACAGTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTATTATAACTGTTATTTTTCAGATTATAATATAATCACAGTAA  848

seq1  TTCTTTCTTCCCATTCCACTCTCTAAATCCTCCCACGTACTCCAACTTGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTCCCATTCCACTCTCTAAATCCTCCCACGTACTCCAACTTGC  898

seq1  TTTTTCAAAGTCATGGCCTCTTTTTTATATTAATTGTTAAATGCTTTACT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAAGTCATGGCCTCTTTTTTATATTAATTGTTAAATGCTTTACT  948

seq1  TTGAGAATTATATGAGAATTTTGTCCTGAATTAACAAATTTGATTTTCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATTATATGAGAATTTTGTCCTGAATTAACAAATTTGATTTTCTT  998

seq1  TATGAATTC  1007
      |||||||||
seq2  TATGAATTC  1007