BAC Information

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BAC

Clone NameB6Ng01-187J05
Chromosome16 (Build37)
Map Location 83,595,145 - 83,621,368
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545172, LOC100039572
Downstream geneEG621729, LOC640489, LOC665664, LOC547311, LOC100039893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187J05.bB6Ng01-187J05.g
ACCGA012117GA012118
length1,1771,191
definitionB6Ng01-187J05.b B6Ng01-187J05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,620,139 - 83,621,368)(83,595,145 - 83,596,345)
sequence
gaattcacagaatgtgtttttatattactgttcttggaatgcatttatta
tcccaattaattcatagttattaaagtcttgcatttttcaaagttttaaa
aaagtatataattgtagattattgtcaacattccagacaaaatagaaata
tgaaaaaggtaatacctagagtatacctaatgcttaagaataaataggag
aggaaagaaaacatcatttgatcagttaccctctctgcagatttagtgaa
tggatacaatacggtgtcaacagtcagtttccaatttcatagcttttgtg
tttctcttaaagatatgaaatcatcatcaattcaaacaatagatataatt
ttaagagtacattatatataccactggaatttttaatatccccaaaaaaa
tagcataataatttaaatatgatacattcaaggctctatattaccaaata
aacgtatgcaagtcattgtggaatatctcagataaggaaaattactgatg
acatagcattgtccatgatgttcatacagtagtttgatattttatgatag
aattcattggctgctagtttacgtataattgtactgggactatggaaatg
caattacgttttctcatttttaatttacataaagttattggcttttttga
acatttattcaagtagttattggtattcagtgtgtagaatgaaattgtac
ttactaaattctaacattctagggcattttctgacaaagtggagggtcaa
ctttgaatcatttaaatattgtaaatgtaaaggtcagttttatttgctca
gaagaaagggaggagatgcgatcaacccagagcatttgtatttccctatc
cttaggtctagggctggcagcttctagtcatcctgcaatttaaaattctg
caactaaggaccttgaaaggcttcagcttcccacctacacctgctgaccg
aagcccataacatctcagcctctgcacattactgctgaatagctcactct
ttctatttttttctgaactctggcttgtgcttcaactcagctgttctggc
tcaaactcttcacgctgagggtttcaatctggcttctctcgcctttcact
gattcctctgcctcacctcaatactcaagggattcaaagaataaaatatt
ggctcttcttatgccctaactccactg
gaattctaggcaactggcaaaagaagacaatacataacttagctctgaca
taaagcaatcatcatgagttattttcaacatagttaacttcaacagattg
atttaaactagtaattattttatgtacctttccatggaatctggaaagct
gataaataatatatttagcatcattcatgtaaattacaaatgggaaaata
caatagagatgtctctgtaatatcacatccattttttttattttatagta
gaccaatctatattcatttttttgcctatacaacctttcaaataatatta
cttcttctatacacatttgaaagtctattttggaactatgactacactgg
aagagtagaaattataatgaaaacctttctaccaggctatagagaataaa
ggcaacatttcaaatgaaagctacaaaaactatcccttttctttctggca
atatcctgatttcttaggctggagtgatgctgaggaaaagaaataaagtg
caataccagcaggcagcatcctgctgctttcagtcaatgaaagagctccc
cagtggatctaagatcactggagttcaaatttaaatgtatccaggtcaca
gtctaagtatcagggtcacccagtcttgaatctgttcttgtggaggtgtg
gaatcccatgcttatgttcctccttactgtagcttaattctacagaccta
ttgaccatgtaaaatcactttcttcttggctacttaactgccaacataag
atgtgactcttctgtttgctaaatttaaaattattacttttttgtgcaaa
tgactttgatatttatagaatgcagggggaacataaaaagggatatataa
aatatactgtatgtgaatttgtaaaggccccacaggtagtctgatacagc
cagggcctcaagcttaccaggagacctgaagtaacccagggacaaaagag
acagactccatacagtcacctagatcaagaaaaaacagtgatatcccaga
atgccacagcaagtgcaagaccattaagcaacagaagccaaacacgtggg
catcatcaggacagtctccccaccacaggcagccctgaatacacggagta
cctgaaattcagatctgtctaaaatctattctcatggaataatagatctt
caggaaattcatttactcactgaaagaaaatcaagaaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83620139_83621368
seq2: B6Ng01-187J05.b_46_1222 (reverse)

seq1  CAGTGGAGTTGAGTTCAGGTCCATTCTATTCATGCAGCAGAGGCAAGTTG  50
                                           |||        ||
seq2  -------------------------------------CAG--------TG  5

seq1  AAGTTAGGGAATAAGAAGGAGCCAATATATTTTATCTTTTAAATTCCTGG  100
       |||||||| ||||||| ||||||  |||||||||  ||| ||| ||| |
seq2  GAGTTAGGGCATAAGAA-GAGCCA--ATATTTTATTCTTTGAATCCCTTG  52

seq1  AGTTAATTTGAGGTGAAGCAGAGGAATTCAGTGAAAGCCGAGAGAAGCCA  150
      |||    ||||||||| ||||||||| |||||||||| ||||||||||||
seq2  AGT---ATTGAGGTGAGGCAGAGGAA-TCAGTGAAAGGCGAGAGAAGCCA  98

seq1  GATTGAAACCCTCAGCGTGAAGAGTTTTGAGCCAGAACAGCTGAGTTGAA  200
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GATTGAAACCCTCAGCGTGAAGAG-TTTGAGCCAGAACAGCTGAGTTGAA  147

seq1  GCAACAAGCCAGAGTTCAGAAAAAAATAGAAAGAGTGAGCTTATTCAGCA  250
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GC-ACAAGCCAGAGTTCAGAAAAAAATAGAAAGAGTGAGC-TATTCAGCA  195

seq1  GTAATGTGCAGAGGCTGAGATGTTATGGGCTTCGGTCAGCAGGTGTAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTGCAGAGGCTGAGATGTTATGGGCTTCGGTCAGCAGGTGTAGGT  245

seq1  GGGAAGCTGAAGCC-TTCAAGGTCCTTAGTTGCAGAATTTTAAATTGCAG  349
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGGAAGCTGAAGCCTTTCAAGGTCCTTAGTTGCAGAATTTTAAATTGCAG  295

seq1  GATGACTAGAAGCTGCCAGCCCTAGACCTAAGGATAGGGAAATACAAATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTAGAAGCTGCCAGCCCTAGACCTAAGGATAGGGAAATACAAATG  345

seq1  CTCTGGGTTGATCGCATCTCCTCCC-TTCTTCTGAGCAAATAAAACTGAC  448
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTCTGGGTTGATCGCATCTCCTCCCTTTCTTCTGAGCAAATAAAACTGAC  395

seq1  CTTTACATTTACAATATTTAAATGATTCAAAGTTGACCCTCCACTTTGTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACATTTACAATATTTAAATGATTCAAAGTTGACCCTCCACTTTGTC  445

seq1  AGAAAATGCCCTAGAATGTTAGAATTTAGTAAGTACAATTTCATTCTACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGCCCTAGAATGTTAGAATTTAGTAAGTACAATTTCATTCTACA  495

seq1  CACTGAATACCAATAACTACTTGAATAAATGTTCAAAAAAGCCAATAACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATACCAATAACTACTTGAATAAATGTTCAAAAAAGCCAATAACT  545

seq1  TTATGTAAATTAAAAATGAGAAAACGTAATTGCATTTCCATAGTCCCAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAAATTAAAAATGAGAAAACGTAATTGCATTTCCATAGTCCCAGT  595

seq1  ACAATTATACGTAAACTAGCAGCCAATGAATTCTATCATAAAATATCAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTATACGTAAACTAGCAGCCAATGAATTCTATCATAAAATATCAAA  645

seq1  CTACTGTATGAACATCATGGACAATGCTATGTCATCAGTAATTTTCCTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTATGAACATCATGGACAATGCTATGTCATCAGTAATTTTCCTTA  695

seq1  TCTGAGATATTCCACAATGACTTGCATACGTTTATTTGGTAATATAGAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGATATTCCACAATGACTTGCATACGTTTATTTGGTAATATAGAGC  745

seq1  CTTGAATGTATCATATTTAAATTATTATGCTATTTTTTTGGGGATATTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATGTATCATATTTAAATTATTATGCTATTTTTTTGGGGATATTAA  795

seq1  AAATTCCAGTGGTATATATAATGTACTCTTAAAATTATATCTATTGTTTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCAGTGGTATATATAATGTACTCTTAAAATTATATCTATTGTTTG  845

seq1  AATTGATGATGATTTCATATCTTTAAGAGAAACACAAAAGCTATGAAATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATGATGATTTCATATCTTTAAGAGAAACACAAAAGCTATGAAATT  895

seq1  GGAAACTGACTGTTGACACCGTATTGTATCCATTCACTAAATCTGCAGAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTGACTGTTGACACCGTATTGTATCCATTCACTAAATCTGCAGAG  945

seq1  AGGGTAACTGATCAAATGATGTTTTCTTTCCTCTCCTATTTATTCTTAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAACTGATCAAATGATGTTTTCTTTCCTCTCCTATTTATTCTTAAG  995

seq1  CATTAGGTATACTCTAGGTATTACCTTTTTCATATTTCTATTTTGTCTGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGTATACTCTAGGTATTACCTTTTTCATATTTCTATTTTGTCTGG  1045

seq1  AATGTTGACAATAATCTACAATTATATACTTTTTTAAAACTTTGAAAAAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGACAATAATCTACAATTATATACTTTTTTAAAACTTTGAAAAAT  1095

seq1  GCAAGACTTTAATAACTATGAATTAATTGGGATAATAAATGCATTCCAAG  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACTTTAATAACTATGAATTAATTGGGATAATAAATGCATTCCAAG  1145

seq1  AACAGTAATATAAAAACACATTCTGTGAATTC  1230
      ||||||||||||||||||||||||||||||||
seq2  AACAGTAATATAAAAACACATTCTGTGAATTC  1177

seq1: chr16_83595145_83596345
seq2: B6Ng01-187J05.g_62_1252

seq1  GAATTCTAGGCAACTGGCAAAAGAAGACAATACATAACTTAGCTCTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCAACTGGCAAAAGAAGACAATACATAACTTAGCTCTGACA  50

seq1  TAAAGCAATCATCATGAGTTATTTTCAACATAGTTAACTTCAACAGATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAATCATCATGAGTTATTTTCAACATAGTTAACTTCAACAGATTG  100

seq1  ATTTAAACTAGTAATTATTTTATGTACCTTTCCATGGAATCTGGAAAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAACTAGTAATTATTTTATGTACCTTTCCATGGAATCTGGAAAGCT  150

seq1  GATAAATAATATATTTAGCATCATTCATGTAAATTACAAATGGGAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATAATATATTTAGCATCATTCATGTAAATTACAAATGGGAAAATA  200

seq1  CAATAGAGATGTCTCTGTAATATCACATCCATTTTTTTTATTTTATAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGAGATGTCTCTGTAATATCACATCCATTTTTTTTATTTTATAGTA  250

seq1  GACCAATCTATATTCATTTTTTTGCCTATACAACCTTTCAAATAATATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATCTATATTCATTTTTTTGCCTATACAACCTTTCAAATAATATTA  300

seq1  CTTCTTCTATACACATTTGAAAGTCTATTTTGGAACTATGACTACACTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTATACACATTTGAAAGTCTATTTTGGAACTATGACTACACTGG  350

seq1  AAGAGTAGAAATTATAATGAAAACCTTTCTACCAGGCTATAGAGAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAGAAATTATAATGAAAACCTTTCTACCAGGCTATAGAGAATAAA  400

seq1  GGCAACATTTCAAATGAAAGCTACAAAAACTATCCCTTTTCTTTCTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACATTTCAAATGAAAGCTACAAAAACTATCCCTTTTCTTTCTGGCA  450

seq1  ATATCCTGATTTCTTAGGCTGGAGTGATGCTGAGGAAAAGAAATAAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTGATTTCTTAGGCTGGAGTGATGCTGAGGAAAAGAAATAAAGTG  500

seq1  CAATACCAGCAGGCAGCATCCTGCTGCTTTCAGTCAATGAAAGAGCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACCAGCAGGCAGCATCCTGCTGCTTTCAGTCAATGAAAGAGCTCCC  550

seq1  CAGTGGATCTAAGATCACTGGAGTTCAAATTTAAATGTATCCAGGTCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGATCTAAGATCACTGGAGTTCAAATTTAAATGTATCCAGGTCACA  600

seq1  GTCTAAGTATCAGGGTCACCCAGTCTTGAATCTGTTCTTGTGGAGGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGTATCAGGGTCACCCAGTCTTGAATCTGTTCTTGTGGAGGTGTG  650

seq1  GAATCCCATGCTTATGTTCCTCCTTACTGTAGCTTAATTCTACAGACCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCCATGCTTATGTTCCTCCTTACTGTAGCTTAATTCTACAGACCTA  700

seq1  TTGACCATGTAAAATCACTTTCTTCTTGGCTACTTAACTGCCAACATAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCATGTAAAATCACTTTCTTCTTGGCTACTTAACTGCCAACATAAG  750

seq1  ATGTGACTCTTCTGTTTGCTAAATTTAAAATTATTACTTTTTTGTGCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTCTTCTGTTTGCTAAATTTAAAATTATTACTTTTTTGTGCAAA  800

seq1  TGACTTTGATATTTATAGAATGCAGGGGGAACATAAAAAGGGATATATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGATATTTATAGAATGCAGGGGGAACATAAAAAGGGATATATAA  850

seq1  AATATACTGTATGTGAATTTGT-AAGGCCCCACAGGTAGTCTGATACAGC  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATATACTGTATGTGAATTTGTAAAGGCCCCACAGGTAGTCTGATACAGC  900

seq1  CAGGGCCTCAAGCTTACCAGGAGACCTGAAGTAACCCAGGGACAAAAGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCTCAAGCTTACCAGGAGACCTGAAGTAACCCAGGGACAAAAGAG  950

seq1  ACAGACTCCATACAGTCACCTAGATCAAGAAAAAACAGTGATATCCCAG-  998
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACAGACTCCATACAGTCACCTAGATCAAGAAAAAACAGTGATATCCCAGA  1000

seq1  ATGCCACAAGGCAAGTGCAAGACCA-TAAGCAACAGAAGCCAAAACACGT  1047
      ||||||||  ||||||||||||||| ||||||||||||||| ||||||||
seq2  ATGCCACA--GCAAGTGCAAGACCATTAAGCAACAGAAGCC-AAACACGT  1047

seq1  GGGCATCATCAGAACCAAGTTCTCCCACCACAGCAAGCCCTGAATACACG  1097
      |||||||||||| ||  |||   ||||||||||  |||||||||||||||
seq2  GGGCATCATCAGGAC--AGTCTCCCCACCACAGGCAGCCCTGAATACACG  1095

seq1  AAGGTACCTGAAAATCAGGAATCTGTCCTAAAATCCTATCTCATGAGATA  1147
       | |||||||||| ||||  |||||| ||||||||   |||||||  |||
seq2  GA-GTACCTGAAATTCAG--ATCTGT-CTAAAATCTATTCTCATGGAATA  1141

seq1  ATAGAATCCTTTAAGGAGAATATCAATAACTCACTGAAAG-AAATACAGA  1196
      |||| |||  || |||| ||| ||| | |||||||||||| ||||  |||
seq2  ATAG-ATC--TTCAGGA-AAT-TCATTTACTCACTGAAAGAAAATCAAGA  1186

seq1  AAAAC  1201
      |||||
seq2  AAAAC  1191