BAC Information

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BAC

Clone NameB6Ng01-187K15
Chromosome16 (Build37)
Map Location 32,896,982 - 33,050,495
singlet/doubletdoublet
Overlap geneFyttd1, Lrch3, EG625660, Iqcg
Upstream geneMfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik
Downstream geneRpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8, 4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn, LOC100043670
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187K15.bB6Ng01-187K15.g
ACCGA012178GA012179
length1,1331,119
definitionB6Ng01-187K15.b B6Ng01-187K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,049,367 - 33,050,495)(32,896,982 - 32,898,105)
sequence
gaattccaggacagccagggctacacagagaaaccctgtctcgaaaagaa
aaaaaaaaaaaaaagaatagcaagagagagctgcttggagggctgtagta
agcagaacatagactgccagcttggacccacagtttgactttgagcttgt
tctgccgctctccaacaccccttctctcagaagccctctccacgccaagg
ctcgtccttggcaacacgcctctcgtggttatgagggtaagtaatatttc
cacactggccaccgacttatttaatcttctttcctctccgccttagggaa
gaggtggaagtcgtggagtctccttcagaggttttacaacctgaggtcac
tgtggtggtgacaggagagcctcctgaagctgcagaagaagatctagatt
acgaagaagaggaagagacctccccggaagtcatagagacgctgtccctt
ctagacgtgctgagggtgtcggccgtcatggaggacgtcattgaccagct
ctctattctcggctacatcattccggttcagtatgaaagaaggcagagcc
tcacccaggtgagcacacacacctcaacccatctcgttctctttcctttg
ggcctctccgttattggactacctgggccattcaactcagcttggaagca
gcacctttacagcaaataaagggccatgtcaccgttctttgagatctgtg
gccaaatggaaaaagtgccatagagcttacggtacttcagtatgctgctg
cagtatgttggctttgtccaaaaggctccgagctaagacttcccgtggtg
tacacagattctggacttctggatcaaccaacatctggtaacaaaatatt
tggaaaagtttggtctttattgactgtgttagagttttcccctttatcac
ctttccctaaacatttcggtaaaacaactgtacattgtgcatcataagca
atctagagcctatcttaaatgtagagagcttttacgtagattgtggccag
cattgcagcagcttttatttaaaggcttgagcagcagccagtgatgtctg
caaccctatcctctggatcttacaggcaggcctgcttgtaattatggagg
atcacatgttagtttttttgggtgctaaagcca
gaattccaggacagccagggctaccagggctacacagagaaaccctgtct
cggggaaaaaaaaaaaaaaaaccctaaaatttatgaattgttaggacatt
ccttctgataatttgtgaagttacattattactattattaatattattat
ttgaattaattattattatttcaagtgctattatttatctcttacagaaa
atgacaagattaatacaacttggattgaggtcttttcgttgctgtataga
catgtagtatcaaattgcagttttacctaatgattattttggaaatcatt
tggttgtatcttttgtgaaaagggatactttgcaaataaaaatgttactt
attgcatgagatttctgtattaattgtgttagctaatgaacctctgaagg
ttggaaatgagatttaggtagggttttaagtactttattatgtaatagta
attataatttataagtatgtgctgtttcatgtatgaaaggattaaaaagt
agagtgtaacttcagttattatttattcgttacaattgtcacagtgtgtg
tggaggtcagaagacaactttgacaagtggggtttgccttcacctctgtg
agttttagggtggaactcgtgttctcagtggggcacagcaagtgcatttt
cctgctgggttaacgaacatagctattatacatccatatacgtgtgcacc
tctgggttttatatattcgtgtgtggtggggtcttccccttgccatactt
atgattgaccccaaggcctcacatgcactcagcagtgctctaccgtttaa
ttctgtcccttaccacatagtttatgaatggagacaaagcaagagcacta
gaaattgctttttcagcccccccccctttaaaagatttatttatttttgt
tggtgtgtatgagtgttatgccttcatgtatgtctggtgcatcacatgct
tgcagtgcatagaggtcaggaacggaatatcagatcccctagaattacag
atgttgtgagcactatggtgggtgctggaattgaatccaggtccctagaa
agagcagcagtgtttttaactttctgaataccctctctcagcacacctct
ttaattatggatcactctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_33049367_33050495
seq2: B6Ng01-187K15.b_44_1176 (reverse)

seq1  TGGCTTTTAGCA--CAAAAAACCTAACATGTGAT-CTCCATATATAC-AG  46
      |||| |||||||  ||||||| |||||||||||| |||||||  ||| ||
seq2  TGGC-TTTAGCACCCAAAAAAACTAACATGTGATCCTCCATAATTACAAG  49

seq1  CAGCCCTGCCTGTAAGATCCAGAGGATA-GGTTCCAGGACATCACTGGCT  95
      ||| |||||||||||||||||||||||| |||| || |||||||||||||
seq2  CAGGCCTGCCTGTAAGATCCAGAGGATAGGGTTGCA-GACATCACTGGCT  98

seq1  GCTGCTCAAGCCCTTAAAT-AAAGCTGCTGCAATGCTGGCCACAATCTAC  144
      |||||||||||| |||||| ||||||||||||||||||||||||||||||
seq2  GCTGCTCAAGCCTTTAAATAAAAGCTGCTGCAATGCTGGCCACAATCTAC  148

seq1  GTAAAAGCTCTCTACATTTAAGATAGGCTCTAGATTGCTTATGATGCACA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGCTCTCTACATTTAAGATAGGCTCTAGATTGCTTATGATGCACA  198

seq1  ATGTACAGTTGTTTTACCGAAATGTTTAGGGAAAGGTGATAAAGGGGAAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAGTTGTTTTACCGAAATGTTTAGGGAAAGGTGATAAAGGGGAAA  248

seq1  ACTCTAACACAGTCAATAAAGACCAAACTTTTCCAAATATTTTGTTACCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAACACAGTCAATAAAGACCAAACTTTTCCAAATATTTTGTTACCA  298

seq1  GATGTTGGTTGATCCAGAAGTCCAGAATCTGTGTACACCACGGGAAGTCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGGTTGATCCAGAAGTCCAGAATCTGTGTACACCACGGGAAGTCT  348

seq1  TAGCTCGGAGCCTTTTGGACAAAGCCAACATACTGCAGCAGCATACTGAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCGGAGCCTTTTGGACAAAGCCAACATACTGCAGCAGCATACTGAA  398

seq1  GTACCGTAAGCTCTATGGCACTTTTTCCATTTGGCCACAGATCTCAAAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCGTAAGCTCTATGGCACTTTTTCCATTTGGCCACAGATCTCAAAGA  448

seq1  ACGGTGACATGGCCCTTTATTTGCTGTAAAGGTGCTGCTTCCAAGCTGAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTGACATGGCCCTTTATTTGCTGTAAAGGTGCTGCTTCCAAGCTGAG  498

seq1  TTGAATGGCCCAGGTAGTCCAATAACGGAGAGGCCCAAAGGAAAGAGAAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGGCCCAGGTAGTCCAATAACGGAGAGGCCCAAAGGAAAGAGAAC  548

seq1  GAGATGGGTTGAGGTGTGTGTGCTCACCTGGGTGAGGCTCTGCCTTCTTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGGTTGAGGTGTGTGTGCTCACCTGGGTGAGGCTCTGCCTTCTTT  598

seq1  CATACTGAACCGGAATGATGTAGCCGAGAATAGAGAGCTGGTCAATGACG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGAACCGGAATGATGTAGCCGAGAATAGAGAGCTGGTCAATGACG  648

seq1  TCCTCCATGACGGCCGACACCCTCAGCACGTCTAGAAGGGACAGCGTCTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATGACGGCCGACACCCTCAGCACGTCTAGAAGGGACAGCGTCTC  698

seq1  TATGACTTCCGGGGAGGTCTCTTCCTCTTCTTCGTAATCTAGATCTTCTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTCCGGGGAGGTCTCTTCCTCTTCTTCGTAATCTAGATCTTCTT  748

seq1  CTGCAGCTTCAGGAGGCTCTCCTGTCACCACCACAGTGACCTCAGGTTGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCTTCAGGAGGCTCTCCTGTCACCACCACAGTGACCTCAGGTTGT  798

seq1  AAAACCTCTGAAGGAGACTCCACGACTTCCACCTCTTCCCTAAGGCGGAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTCTGAAGGAGACTCCACGACTTCCACCTCTTCCCTAAGGCGGAG  848

seq1  AGGAAAGAAGATTAAATAAGTCGGTGGCCAGTGTGGAAATATTACTTACC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAAGATTAAATAAGTCGGTGGCCAGTGTGGAAATATTACTTACC  898

seq1  CTCATAACCACGAGAGGCGTGTTGCCAAGGACGAGCCTTGGCGTGGAGAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAACCACGAGAGGCGTGTTGCCAAGGACGAGCCTTGGCGTGGAGAG  948

seq1  GGCTTCTGAGAGAAGGGGTGTTGGAGAGCGGCAGAACAAGCTCAAAGTCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGAGAGAAGGGGTGTTGGAGAGCGGCAGAACAAGCTCAAAGTCA  998

seq1  AACTGTGGGTCCAAGCTGGCAGTCTATGTTCTGCTTACTACAGCCCTCCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGGGTCCAAGCTGGCAGTCTATGTTCTGCTTACTACAGCCCTCCA  1048

seq1  AGCAGCTCTCTCTTGCTATTCTTTTTTTTTTTTTTTTCTTTTCGAGACAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTCTCTCTTGCTATTCTTTTTTTTTTTTTTTTCTTTTCGAGACAG  1098

seq1  GGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTC  1129
      |||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTC  1133

seq1: chr16_32896982_32898105
seq2: B6Ng01-187K15.g_66_1184

seq1  GAATTCCAGGACAGCCAGGGCTACCAGGGCTACACAGAGAAACCCTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACCAGGGCTACACAGAGAAACCCTGTCT  50

seq1  CGGGGAAAAAAAAAAAAAAAACCCTAAAATTTATGAATTGTTAGGACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAAAAAAAAAAAAAAAACCCTAAAATTTATGAATTGTTAGGACATT  100

seq1  CCTTCTGATAATTTGTGAAGTTACATTATTACTATTATTAATATTATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGATAATTTGTGAAGTTACATTATTACTATTATTAATATTATTAT  150

seq1  TTGAATTAATTATTATTATTTCAAGTGCTATTATTTATCTCTTACAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTAATTATTATTATTTCAAGTGCTATTATTTATCTCTTACAGAAA  200

seq1  ATGACAAGATTAATACAACTTGGATTGAGGTCTTTTCGTTGCTGTATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAGATTAATACAACTTGGATTGAGGTCTTTTCGTTGCTGTATAGA  250

seq1  CATGTAGTATCAAATTGCAGTTTTACCTAATGATTATTTTGGAAATCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGTATCAAATTGCAGTTTTACCTAATGATTATTTTGGAAATCATT  300

seq1  TGGTTGTATCTTTTGTGAAAAGGGATACTTTGCAAATAAAAATGTTACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTATCTTTTGTGAAAAGGGATACTTTGCAAATAAAAATGTTACTT  350

seq1  ATTGCATGAGATTTCTGTATTAATTGTGTTAGCTAATGAACCTCTGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATGAGATTTCTGTATTAATTGTGTTAGCTAATGAACCTCTGAAGG  400

seq1  TTGGAAATGAGATTTAGGTAGGGTTTTAAGTACTTTATTATGTAATAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATGAGATTTAGGTAGGGTTTTAAGTACTTTATTATGTAATAGTA  450

seq1  ATTATAATTTATAAGTATGTGCTGTTTCATGTATGAAAGGATTAAAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATTTATAAGTATGTGCTGTTTCATGTATGAAAGGATTAAAAAGT  500

seq1  AGAGTGTAACTTCAGTTATTATTTATTCGTTACAATTGTCACAGTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTAACTTCAGTTATTATTTATTCGTTACAATTGTCACAGTGTGTG  550

seq1  TGGAGGTCAGAAGACAACTTTGACAAGTGGGGTTTGCCTTCACCTCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCAGAAGACAACTTTGACAAGTGGGGTTTGCCTTCACCTCTGTG  600

seq1  AGTTTTAGGGTGGAACTCGTGTTCTCAGTGGGGCACAGCAAGTGCATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAGGGTGGAACTCGTGTTCTCAGTGGGGCACAGCAAGTGCATTTT  650

seq1  CCTGCTGGGTTAACGAACATAGCTATTATACATCCATATACGTGTGCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGGGTTAACGAACATAGCTATTATACATCCATATACGTGTGCACC  700

seq1  TCTGGGTTTTATATATTCGTGTGTGGTGGGGTCTTCCCCTTGCCATACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTTTTATATATTCGTGTGTGGTGGGGTCTTCCCCTTGCCATACTT  750

seq1  ATGATTGACCCCAAGGCCTCACATGCACTCAGCAGTGCTCTACCGTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGACCCCAAGGCCTCACATGCACTCAGCAGTGCTCTACCGTTTAA  800

seq1  TTCTGTCCCTTACCACATAGTTTATGAATGGAGACAAAGCAAGAGCACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCCTTACCACATAGTTTATGAATGGAGACAAAGCAAGAGCACTA  850

seq1  GAAATTGC-TTTTCAGCCCCCCCCCCTTTAAAAAGATTTATTTATTTTTG  899
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  GAAATTGCTTTTTCAGCCCCCCCCCCTTT-AAAAGATTTATTTATTTTTG  899

seq1  TTTGGTGTGTATGAGTGTTATGCCTTCATGTATGTCT-GTGCATCACATG  948
       |||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  -TTGGTGTGTATGAGTGTTATGCCTTCATGTATGTCTGGTGCATCACATG  948

seq1  CTTGCAGTGCATAGAGGTCAGGAACGG-ATATCAGATCCCCCTAGAATTA  997
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  CTTGCAGTGCATAGAGGTCAGGAACGGAATATCAGAT-CCCCTAGAATTA  997

seq1  CAGATTGTTGTGAGCCACTAT-GTGGGTGCTGGAAATTGAATCCAGGTCC  1046
      |||| ||||||||| |||||| ||||||||||| |||||||||||||| |
seq2  CAGA-TGTTGTGAG-CACTATGGTGGGTGCTGG-AATTGAATCCAGGT-C  1043

seq1  CCTAGAAAGAGCAGCCAGTGTTTTTATC-TTCTG-ATACCTCTCTC-CAG  1093
      |||||||||||||| ||||||||||| | ||||| ||||| ||||| |||
seq2  CCTAGAAAGAGCAG-CAGTGTTTTTAACTTTCTGAATACC-CTCTCTCAG  1091

seq1  CCACAACTCTTTATTTATGGTTTTCACTCTG  1124
       |||| ||||||| ||||||   ||||||||
seq2  -CACACCTCTTTAATTATGG--ATCACTCTG  1119