BAC Information

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BAC

Clone NameB6Ng01-187L23
Chromosome16 (Build37)
Map Location 58,258,382 - 58,259,497
singlet/doubletsinglet
Overlap geneLOC100043477
Upstream geneTmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187L23.bB6Ng01-187L23.g
ACCGA012240GA012241
length1,112201
definitionB6Ng01-187L23.b B6Ng01-187L23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgcattggtacctccacacagaattagctttctcttccccaa
catccaccttcctttaatttcccaacagaatctattgatcatgccctgac
ccccaaagcagctgtgttgctggttctgtgagtgatggttcagtggctgg
gtgaaggtgcaaagggtaggcacatgatttgacagctttcctaccagtgg
cccctcagaaaacagctaatcattgctatattttacaatagctttccagt
tatgatttcccaggtgagcacagaaatgtataaaaagggcattacaagag
atgatcagggactgccacaaaattattactgaaaatgtttgtactattac
ttaatgtttcctgagaacgatttgtatataatctctttagtgttcagttc
caggaaaatttgtctattccaataaaagcacaaaattaaaaatattaata
acaaaataactgaagaaaactgcatggtgaggggttaagaacctatcaat
gacgaaaaccaatcatattacagtttttcttgatgccaaagctctcagca
agctcaggtttctattttatattaaatcacagtatttacttttctcctat
attgttggtaagaatgtaaagaaagtatctttctgttactttcattactg
cacacttaatattttttccaaatatggttttgatctagagctgtcttaaa
ttttcacactgaataatcataaataatgcagttaagctgggcagtggtgg
tgcatgcctttaatcccagcactagggaggcagaggacggcagatttctg
agattgctgagttcgaggccagcctggtctacagagtgagttctaggaca
gccacggctacacaaagaaaccctgtcttgaaaaaacagaacaaaacaaa
acagaaaaaaaattaatgcatttaaagttaaaagaagtttatattagttc
cattttaggactgctttactctctaggattttttctgatcacttcattac
ttgtatttagctattcatatctttatgatgcttatttaatattgtttctc
ttacttggacaattctacttacattcaaagtttcctcactgtaggaatct
ggtacctctctg
atttttgctttacaatagggctacaaagctatggtggtcaggacagtggg
atgtgatagtttgaataggagtggccctcataggctcatatatttgaaag
cttggtgttaaaaagtggaactacttaataggaattgggaggtgtagccc
tgctggaataggtgtggtctagttagaggaagtgtgttgttgtgggggag
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58258382_58259497
seq2: B6Ng01-187L23.b_45_1156 (reverse)

seq1  CAGAGA-GTA-CAGATT-CTACAGTGAGAAAATTTAAAATGTAAGTAGAA  47
      |||||| ||| |||||| |||||||||| ||| ||  ||||||||||| |
seq2  CAGAGAGGTACCAGATTCCTACAGTGAGGAAACTTTGAATGTAAGTAG-A  49

seq1  ATTGTCAAAGTAAGAGAAAACAAATATTTAAATAAACAATCATAAAGGAT  97
      |||||| ||||||||||||   |||| |||||||| | |||||||| |||
seq2  ATTGTCCAAGTAAGAGAAA--CAATA-TTAAATAAGC-ATCATAAA-GAT  94

seq1  ATGAATAGCTAAATACAAGTAATGAAAGTGATCAGAAAAAAATCCTAGAG  147
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  ATGAATAGCTAAATACAAGTAATG-AAGTGATCAG-AAAAAATCCTAGAG  142

seq1  AGTAAAGCAGT-CTAAAATGGAACTAATATAAACTTCTTTTAACTTTAAA  196
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGCAGTCCTAAAATGGAACTAATATAAACTTCTTTTAACTTTAAA  192

seq1  TGCATTAA-TTTTTTTCTGTTTTGTTTTGTTTCTGTTTTTTCAAGACAGG  245
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  TGCATTAATTTTTTTTCTGTTTTGTTTTG-TTCTGTTTTTTCAAGACAGG  241

seq1  GTTTCTTTGTGTAGCCGTGGCTGTCCTAGAACTCACTCTGTAGACCAGGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTGTGTAGCCGTGGCTGTCCTAGAACTCACTCTGTAGACCAGGC  291

seq1  TGGCCTCGAACTCAGCAATCTCAGAAATCTGCCGTCCTCTGCCTCCCTAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCGAACTCAGCAATCTCAGAAATCTGCCGTCCTCTGCCTCCCTAG  341

seq1  TGCTGGGATTAAAGGCATGCACCACCACTGCCCAGCTTAACTGCATTATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTAAAGGCATGCACCACCACTGCCCAGCTTAACTGCATTATT  391

seq1  TATGATTATTCAGTGTGAAAATTTAAGACAGCTCTAGATCAAAACCATAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTATTCAGTGTGAAAATTTAAGACAGCTCTAGATCAAAACCATAT  441

seq1  TTGGAAAAAATATTAAGTGTGCAGTAATGAAAGTAACAGAAAGATACTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAAAATATTAAGTGTGCAGTAATGAAAGTAACAGAAAGATACTTT  491

seq1  CTTTACATTCTTACCAACAATATAGGAGAAAAGTAAATACTGTGATTTAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACATTCTTACCAACAATATAGGAGAAAAGTAAATACTGTGATTTAA  541

seq1  TATAAAATAGAAACCTGAGCTTGCTGAGAGCTTTGGCATCAAGAAAAACT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATAGAAACCTGAGCTTGCTGAGAGCTTTGGCATCAAGAAAAACT  591

seq1  GTAATATGATTGGTTTTCGTCATTGATAGGTTCTTAACCCCTCACCATGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATGATTGGTTTTCGTCATTGATAGGTTCTTAACCCCTCACCATGC  641

seq1  AGTTTTCTTCAGTTATTTTGTTATTAATATTTTTAATTTTGTGCTTTTAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTTCAGTTATTTTGTTATTAATATTTTTAATTTTGTGCTTTTAT  691

seq1  TGGAATAGACAAATTTTCCTGGAACTGAACACTAAAGAGATTATATACAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAGACAAATTTTCCTGGAACTGAACACTAAAGAGATTATATACAA  741

seq1  ATCGTTCTCAGGAAACATTAAGTAATAGTACAAACATTTTCAGTAATAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTCTCAGGAAACATTAAGTAATAGTACAAACATTTTCAGTAATAAT  791

seq1  TTTGTGGCAGTCCCTGATCATCTCTTGTAATGCCCTTTTTATACATTTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGCAGTCCCTGATCATCTCTTGTAATGCCCTTTTTATACATTTCT  841

seq1  GTGCTCACCTGGGAAATCATAACTGGAAAGCTATTGTAAAATATAGCAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCACCTGGGAAATCATAACTGGAAAGCTATTGTAAAATATAGCAAT  891

seq1  GATTAGCTGTTTTCTGAGGGGCCACTGGTAGGAAAGCTGTCAAATCATGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGCTGTTTTCTGAGGGGCCACTGGTAGGAAAGCTGTCAAATCATGT  941

seq1  GCCTACCCTTTGCACCTTCACCCAGCCACTGAACCATCACTCACAGAACC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACCCTTTGCACCTTCACCCAGCCACTGAACCATCACTCACAGAACC  991

seq1  AGCAACACAGCTGCTTTGGGGGTCAGGGCATGATCAATAGATTCTGTTGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACACAGCTGCTTTGGGGGTCAGGGCATGATCAATAGATTCTGTTGG  1041

seq1  GAAATTAAAGGAAGGTGGATGTTGGGGAAGAGAAAGCTAATTCTGTGTGG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAAGGAAGGTGGATGTTGGGGAAGAGAAAGCTAATTCTGTGTGG  1091

seq1  AGGTACCAATGCAGAGAATTC  1116
      |||||||||||||||||||||
seq2  AGGTACCAATGCAGAGAATTC  1112