BAC Information

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BAC

Clone NameB6Ng01-188E17
Chromosome16 (Build37)
Map Location 32,537,340 - 32,538,425
singlet/doubletsinglet
Overlap genenone
Upstream geneGm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19
Downstream geneLOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188E17.bB6Ng01-188E17.g
ACCGA012630GA012631
length2851,084
definitionB6Ng01-188E17.b B6Ng01-188E17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tataacctgcatattcatattcactgatgtttcattcataacaattagaa
aacggaaacagcccagatgtctatcagtgggtgcatagatgtgggttaaa
agatggcccaggaccgcttggggcttgggccgctcggcaaggcaggacaa
gggaagtcttgactgctcgttccccatggcgtcacaggatgggcgttgga
ctgtgagaagccgaggaaccctgttccagagctgcggaagcacaatctaa
ggtcctgggggattgctggatttgcctcggggggg
gaattcagcacagcgacacactattggcttattcaaacattaacagaaag
aacatagggcatcaggactttcttcctgtggactggggggcttatctttg
ttcacatagcaaccagttgatgtatgactttacccggcaccaaggggcaa
tagacagaggggagattcttagataatatagccctgctggtccttgtatc
tttacagtcaagatgttcttaggaatgccttaacaacagccctgccctgg
catgcctgggggctgttctgctttgttcttggtcccaggccgggctgtgg
gctcctaaactcacaagttacaatattttatcttccttcagcacaatcat
ctgatcccagagatctgatgccctcttctgacgtctgtggtacaaggtat
acacatggtgcatatacatacatccaggcaaaatattcatatattcaaaa
taaaataaaataaaataaaataaaaagataaacaaacaaacaaactgttt
atcaataaatactaatgaagttttaatcagctcagattttctcagtggcc
ctagtgtatagttcaaattcttaggtaatgaggaaggccacgaagagttt
ctaagtgtgatgctatttcctaaatgctaagtgaattagtttacaagcca
ggtagaaaatcattagtaactgagtatcagggcgtgggagagatgtttcc
agcacagaaaagcccaagcatgctggtatagtactaaggcctttctccct
aactcgtgaagtgttttttcctcttaagagttgactggataaccaaattc
caactgaaggagttcctaacagggactgtagctcaagagccctagccatc
aagcacgaagaaaggaatcttagagaggggctgctctcctagaggaccat
ctgcctccagcttgagaacctttgtttcctcaagagtcctaaattttaga
tcaagcaagggcttaatctcttctatattgtatctgtagcccctttgtct
gctgcagccttagccctactcactgtgattaagtacctctccttttatct
ctttactggtggcccctgcccagtcagaactttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32537340_32538425
seq2: B6Ng01-188E17.g_64_1147

seq1  GAATTCAGCACAGCGACACACTATTGGCTTATTCAAACATTAACAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACAGCGACACACTATTGGCTTATTCAAACATTAACAGAAAG  50

seq1  AACATAGGGCATCAGGACTTTCTTCCTGTGGACTGGGGGGCTTATCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGGGCATCAGGACTTTCTTCCTGTGGACTGGGGGGCTTATCTTTG  100

seq1  TTCACATAGCAACCAGTTGATGTATGACTTTACCCGGCACCAAGGGGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATAGCAACCAGTTGATGTATGACTTTACCCGGCACCAAGGGGCAA  150

seq1  TAGACAGAGGGGAGATTCTTAGATAATATAGCCCTGCTGGTCCTTGTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGAGGGGAGATTCTTAGATAATATAGCCCTGCTGGTCCTTGTATC  200

seq1  TTTACAGTCAAGATGTTCTTAGGAATGCCTTAACAACAGCCCTGCCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGTCAAGATGTTCTTAGGAATGCCTTAACAACAGCCCTGCCCTGG  250

seq1  CATGCCTGGGGGCTGTTCTGCTTTGTTCTTGGTCCCAGGCCGGGCTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGGGGGCTGTTCTGCTTTGTTCTTGGTCCCAGGCCGGGCTGTGG  300

seq1  GCTCCTAAACTCACAAGTTACAATATTTTATCTTCCTTCAGCACAATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAAACTCACAAGTTACAATATTTTATCTTCCTTCAGCACAATCAT  350

seq1  CTGATCCCAGAGATCTGATGCCCTCTTCTGACGTCTGTGGTACAAGGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCCAGAGATCTGATGCCCTCTTCTGACGTCTGTGGTACAAGGTAT  400

seq1  ACACATGGTGCATATACATACATCCAGGCAAAATATTCATATATTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGGTGCATATACATACATCCAGGCAAAATATTCATATATTCAAAA  450

seq1  TAAAATAAAATAAAATAAAATAAAAAGATAAACAAACAAACAAACTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAATAAAATAAAATAAAAAGATAAACAAACAAACAAACTGTTT  500

seq1  ATCAATAAATACTAATGAAGTTTTAATCAGCTCAGATTTTCTCAGTGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAAATACTAATGAAGTTTTAATCAGCTCAGATTTTCTCAGTGGCC  550

seq1  CTAGTGTATAGTTCAAATTCTTAGGTAATGAGGAAGGCCACGAAGAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTATAGTTCAAATTCTTAGGTAATGAGGAAGGCCACGAAGAGTTT  600

seq1  CTAAGTGTGATGCTATTTCCTAAATGCTAAGTGAATTAGTTTACAAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGTGATGCTATTTCCTAAATGCTAAGTGAATTAGTTTACAAGCCA  650

seq1  GGTAGAAAATCATTAGTAACTGAGTATCAGGGCGTGGGAGAGATGTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAAATCATTAGTAACTGAGTATCAGGGCGTGGGAGAGATGTTTCC  700

seq1  AGCACAGAAAAGCCCAAGCATGCTGGTATAGTACTAAGGCCTTTCTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAAAAGCCCAAGCATGCTGGTATAGTACTAAGGCCTTTCTCCCT  750

seq1  AACTCGTGAAGTGTTTTTTCCTCTTAAGAGTTGACTGGATAACCAAATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCGTGAAGTGTTTTTTCCTCTTAAGAGTTGACTGGATAACCAAATTC  800

seq1  CAACTGAAGGAGTTCCTAACAGGGACTGTAGCTCAAGAGCCCTAGCCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAAGGAGTTCCTAACAGGGACTGTAGCTCAAGAGCCCTAGCCATC  850

seq1  AAGCACGAAG-AAGGAATCTTAGAAGAGGGGCTGCTCTCCTAGAGGACCA  899
      |||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  AAGCACGAAGAAAGGAATCTTAG-AGAGGGGCTGCTCTCCTAGAGGACCA  899

seq1  TCTGCCTCCAGCTTGAG-ACCTT--GTTCCTCAAGAGTCCT-AATTTTAG  945
      ||||||||||||||||| |||||   ||||||||||||||| ||||||||
seq2  TCTGCCTCCAGCTTGAGAACCTTTGTTTCCTCAAGAGTCCTAAATTTTAG  949

seq1  ATCAAGCAAGGGCTTAATCTCTTCTTATATTTGTATCTGTAGCCCCTTTG  995
      |||||||||||||||||||||||| |||| ||||||||||||||||||||
seq2  ATCAAGCAAGGGCTTAATCTCTTC-TATA-TTGTATCTGTAGCCCCTTTG  997

seq1  TTCTGCTGCAGCCTTTAGCCTACTCACTGTGTTTACCTTACCTCTCCTTT  1045
       ||||||||||||||   ||||||||||||| |||   ||||||||||||
seq2  -TCTGCTGCAGCCTTAGCCCTACTCACTGTGATTA-AGTACCTCTCCTTT  1045

seq1  TATCTTCTTTACTGGTGGGCCCCCTGGCCAG-CAGAACTTTG  1086
      |||| |||||||||||||  |||||| |||| ||||||||||
seq2  TATC-TCTTTACTGGTGG--CCCCTGCCCAGTCAGAACTTTG  1084