BAC Information

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BAC

Clone NameB6Ng01-189B20
Chromosome16 (Build37)
Map Location 70,916,336 - 71,065,672
singlet/doubletdoublet
Overlap geneLOC100039231
Upstream geneEG664930, Gbe1, D16Ertd519e
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189B20.bB6Ng01-189B20.g
ACCGA013226GA013227
length1,1311,115
definitionB6Ng01-189B20.b B6Ng01-189B20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,064,546 - 71,065,672)(70,916,336 - 70,917,440)
sequence
gaattcttcatagaagacataatggaaaaatatgatcatctcatagccac
caaaaagctagaagcaataatgttttgctgagtttgccccagtgacccca
tctcttctaatgatccccacatccagaattaccaaattctcctagtagca
ctacagaattgtgaccaaaagcatgaacgttggagagacttttggaaaca
aacttcaagaaagagaggtagcagccttcctttgtattggcagggtctgt
aacacattgctgggatgggggtctattttatgctcctggagaaaataaac
aatggtattagtctacatccattcaggcacaccttgtaattcaaatttcc
aagagtagagctaaaaagaaaaatagtgataatataatccttactacagt
cagtgcctgtgcgacaacttagaggtatcactcaacatttaccatgatgt
tcaatttagaatacttcatgatataattagcaatgtttagctttcttcaa
tcttaaggagtgttaatgtcataaaaatctgtaaaggtctagagatctat
ccattcttacaagtactataccataacatctttttattttgtgattggtt
ttagtctgaaagagtacttttcagctgcaccaaaaatgttttcaaatgaa
agaacaaataatgctcatttcaatcagaacattattggaatttttataag
aaaataactctgaagtgattactgcattatatacattggacttaattcca
ataattgtagttttggcagaaatattaatattttctttgaaacttaaatg
tttaaacacatggcagttgttcatcaagtgaacaatttttctttagtatc
ttagtctgtcttattccagtacttctctatctttaatgtaagaagttgca
tgagatttcatattttcaggtagatgattttaatgaatttcagtatactg
gcattattagataacatctttgtactctctcatctcttcactcaaaaata
cattaagtttcttttatccagtattttgaaagttatcctatttttttttc
ctttttactcttcagaggtacctgaatagtaacatcgatccaatccattg
ggtatttgagaagaattagtaaaagataaac

gaattcagaaagataggaagaaaactaagatgacttgatattttgtaatt
taaagcagggttgtaataattaacgggtgtcaaacagattggagattttg
ataagataaaatctgaagacattcaaatagcagtataaagactgagctgg
gtttattatgtattgtggactttgtgtgtacgtgtgtgtgtgtgtgtgta
aattaatgacaatagacaacttaaaagacaatagtggtagatatatgaat
aagcagatttcaaaggaagaaagggaaaatgatgaaattgtattataata
tcaaaaaatgatttttgattttttttttttacaaaaagaatgataagctc
tgaagaacaaacgggtcttgaacattcaatgtacacatcaacttattctc
tttatttacttaatcttttatgtatgcatagctacaggctcaggtgagtg
gaggctaaaagttcatgtatgtcttccttgattgctttccccctgtctcg
cttgagacaaggtctctcactgaccctgaagctcctgggtcatctcgtta
tctagtaaagcccaggaatcctgcccaggcctcgccagccttagaatcga
agccatttcacttctctttttacctgggtactggtatttgaactcagttc
ctcatacgtgcatgacaagcactgtgcctactgagttatgcctcagcttc
tctaacctgtgatttattggtgactgaaaactgctagagtaggaagactg
ggcaggtgcaccagttgctgggaaataacttatttcatagcacccatttc
aaggaatcactatggcaaatacatttcatcagatctatgaccctctttct
gaaactcacataaaaaaaaccccttgcatagacatactcaacaaataatg
taaactgctcttcttggcattgcctgattttattgaaatagagattggtt
tgaaaatcatttttggtgttcttttttctaagaagtaatgaattcctaat
cctcgaagctatttttagaaaatgttcttaaccttcttaagaaatcttcc
taaatgtactctatattaaaagaaaaacctgcttggataaaaattgtatc
ctcttaccaatatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71064546_71065672
seq2: B6Ng01-189B20.b_48_1178 (reverse)

seq1  GTTTCTCTTTT-CTTATTCTTCTC-AATTCCCAATGGAATTGGGATCGAT  48
      |||| |||||| || ||||||||| ||| |||||||||  | ||||||||
seq2  GTTTATCTTTTACTAATTCTTCTCAAATACCCAATGGA--TTGGATCGAT  48

seq1  G-TACTA-TCAGGTACCCTCTTGAGAGTAAAAAGAAAAAAAAAATAGGAA  96
      | ||||| ||||||| |||||  ||||||||||| ||||||||||||| |
seq2  GTTACTATTCAGGTA-CCTCTGAAGAGTAAAAAGGAAAAAAAAATAGG-A  96

seq1  TAACTTTCAAAAATACTTGATAAAAGAAACTTAATTGTA-TTTTGAGTGA  145
      |||||||| |||||||| |||||||||||||||| |||| ||||||||||
seq2  TAACTTTC-AAAATACTGGATAAAAGAAACTTAA-TGTATTTTTGAGTGA  144

seq1  AGAGATGAGAGAGTACAAAGATGTTATCTAATAATGCCAGTATACTG-AA  194
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGAGATGAGAGAGTACAAAGATGTTATCTAATAATGCCAGTATACTGAAA  194

seq1  TTCATTAAAATCATCTACCTGAAAATATG-AATCTCATGCAACTTCTTAC  243
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCATTAAAATCATCTACCTGAAAATATGAAATCTCATGCAACTTCTTAC  244

seq1  ATT-AAGATAGAGAAGTACTGGAATAAGACAGACTAAGATACTAAAG-AA  291
      ||| ||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTAAAGATAGAGAAGTACTGGAATAAGACAGACTAAGATACTAAAGAAA  294

seq1  AATTGTTCACTTGATGAACAACTGCCATGTGTTTAAACATTTAAGTTTC-  340
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AATTGTTCACTTGATGAACAACTGCCATGTGTTTAAACATTTAAGTTTCA  344

seq1  AAGAAAATATTAATATTTCTGCCAAAACTACAATTATTGGAATTAAGTCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATATTAATATTTCTGCCAAAACTACAATTATTGGAATTAAGTCC  394

seq1  AATGTATATAATGCAGTAATCACTTCAGAGTTATTTTCTTATAAAAATTC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATATAATGCAGTAATCACTTCAGAGTTATTTTCTTATAAAAATTC  444

seq1  CAATAATGTTCTGATTGAAATGAGCATTATTTGTTCTTTCATTTGAAAAC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATGTTCTGATTGAAATGAGCATTATTTGTTCTTTCATTTGAAAAC  494

seq1  ATTTTTGGTGCAGCTGAAAAGTACTCTTTCAGACTAAAACCAATCACAAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGTGCAGCTGAAAAGTACTCTTTCAGACTAAAACCAATCACAAA  544

seq1  ATAAAAAGATGTTATGGTATAGTACTTGTAAGAATGGATAGATCTCTAGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGATGTTATGGTATAGTACTTGTAAGAATGGATAGATCTCTAGA  594

seq1  CCTTTACAGATTTTTATGACATTAACACTCCTTAAGATTGAAGAAAGCTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACAGATTTTTATGACATTAACACTCCTTAAGATTGAAGAAAGCTA  644

seq1  AACATTGCTAATTATATCATGAAGTATTCTAAATTGAACATCATGGTAAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGCTAATTATATCATGAAGTATTCTAAATTGAACATCATGGTAAA  694

seq1  TGTTGAGTGATACCTCTAAGTTGTCGCACAGGCACTGACTGTAGTAAGGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGTGATACCTCTAAGTTGTCGCACAGGCACTGACTGTAGTAAGGA  744

seq1  TTATATTATCACTATTTTTCTTTTTAGCTCTACTCTTGGAAATTTGAATT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTATCACTATTTTTCTTTTTAGCTCTACTCTTGGAAATTTGAATT  794

seq1  ACAAGGTGTGCCTGAATGGATGTAGACTAATACCATTGTTTATTTTCTCC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTGTGCCTGAATGGATGTAGACTAATACCATTGTTTATTTTCTCC  844

seq1  AGGAGCATAAAATAGACCCCCATCCCAGCAATGTGTTACAGACCCTGCCA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCATAAAATAGACCCCCATCCCAGCAATGTGTTACAGACCCTGCCA  894

seq1  ATACAAAGGAAGGCTGCTACCTCTCTTTCTTGAAGTTTGTTTCCAAAAGT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGGAAGGCTGCTACCTCTCTTTCTTGAAGTTTGTTTCCAAAAGT  944

seq1  CTCTCCAACGTTCATGCTTTTGGTCACAATTCTGTAGTGCTACTAGGAGA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAACGTTCATGCTTTTGGTCACAATTCTGTAGTGCTACTAGGAGA  994

seq1  ATTTGGTAATTCTGGATGTGGGGATCATTAGAAGAGATGGGGTCACTGGG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTAATTCTGGATGTGGGGATCATTAGAAGAGATGGGGTCACTGGG  1044

seq1  GCAAACTCAGCAAAACATTATTGCTTCTAGCTTTTTGGTGGCTATGAGAT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTCAGCAAAACATTATTGCTTCTAGCTTTTTGGTGGCTATGAGAT  1094

seq1  GATCATATTTTTCCATTATGTCTTCTATGAAGAATTC  1127
      |||||||||||||||||||||||||||||||||||||
seq2  GATCATATTTTTCCATTATGTCTTCTATGAAGAATTC  1131


seq1: chr16_70916336_70917440
seq2: B6Ng01-189B20.g_63_1177

seq1  GAATTCAGAAAGATAGGAAGAAAACTAAGATGACTTGATATTTTGTAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAGATAGGAAGAAAACTAAGATGACTTGATATTTTGTAATT  50

seq1  TAAAGCAGGGTTGTAATAATTAACGGGTGTCAAACAGATTGGAGATTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAGGGTTGTAATAATTAACGGGTGTCAAACAGATTGGAGATTTTG  100

seq1  ATAAGATAAAATCTGAAGACATTCAAATAGCAGTATAAAGACTGAGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATAAAATCTGAAGACATTCAAATAGCAGTATAAAGACTGAGCTGG  150

seq1  GTTTATTATGTATTGTGGACTTTGTGTGTACGTGTGTGTGTGTGTGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTATGTATTGTGGACTTTGTGTGTACGTGTGTGTGTGTGTGTGTA  200

seq1  AATTAATGACAATAGACAACTTAAAAGACAATAGTGGTAGATATATGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATGACAATAGACAACTTAAAAGACAATAGTGGTAGATATATGAAT  250

seq1  AAGCAGATTTCAAAGGAAGAAAGGGAAAATGATGAAATTGTATTATAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGATTTCAAAGGAAGAAAGGGAAAATGATGAAATTGTATTATAATA  300

seq1  TCAAAAAATGATTTTTGATTTTTTTTTTTTACAAAAAGAATGATAAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAATGATTTTTGATTTTTTTTTTTTACAAAAAGAATGATAAGCTC  350

seq1  TGAAGAACAAACGGGTCTTGAACATTCAATGTACACATCAACTTATTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACAAACGGGTCTTGAACATTCAATGTACACATCAACTTATTCTC  400

seq1  TTTATTTACTTAATCTTTTATGTATGCATAGCTACAGGCTCAGGTGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTACTTAATCTTTTATGTATGCATAGCTACAGGCTCAGGTGAGTG  450

seq1  GAGGCTAAAAGTTCATGTATGTCTTCCTTGATTGCTTTCCCCCTGTCTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTAAAAGTTCATGTATGTCTTCCTTGATTGCTTTCCCCCTGTCTCG  500

seq1  CTTGAGACAAGGTCTCTCACTGACCCTGAAGCTCCTGGGTCATCTCGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGACAAGGTCTCTCACTGACCCTGAAGCTCCTGGGTCATCTCGTTA  550

seq1  TCTAGTAAAGCCCAGGAATCCTGCCCAGGCCTCGCCAGCCTTAGAATCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTAAAGCCCAGGAATCCTGCCCAGGCCTCGCCAGCCTTAGAATCGA  600

seq1  AGCCATTTCACTTCTCTTTTTACCTGGGTACTGGTATTTGAACTCAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTTCACTTCTCTTTTTACCTGGGTACTGGTATTTGAACTCAGTTC  650

seq1  CTCATACGTGCATGACAAGCACTGTGCCTACTGAGTTATGCCTCAGCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATACGTGCATGACAAGCACTGTGCCTACTGAGTTATGCCTCAGCTTC  700

seq1  TCTAACCTGTGATTTATTGGTGACTGAAAACTGCTAGAGTAGGAAGACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCTGTGATTTATTGGTGACTGAAAACTGCTAGAGTAGGAAGACTG  750

seq1  GGCAGGTGCACCAG-TGCTGGGAAATAACTTATTTCATAGCACCCATTTC  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGCAGGTGCACCAGTTGCTGGGAAATAACTTATTTCATAGCACCCATTTC  800

seq1  AAGGAATCACTATGGCAAATACA-TTCATCAGATCTATGACCCTC-TTCT  847
      ||||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  AAGGAATCACTATGGCAAATACATTTCATCAGATCTATGACCCTCTTTCT  850

seq1  GAAACTCACAT-AAAAAAACCCCTTGCATAGACATACTCAACAAAT-ATG  895
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  GAAACTCACATAAAAAAAACCCCTTGCATAGACATACTCAACAAATAATG  900

seq1  TAAACTGCTCTTCTTGGCATTGCCTGATTTTAT--GAATAGAGATTGGTT  943
      |||||||||||||||||||||||||||||||||   |||||||||||| |
seq2  TAAACTGCTCTTCTTGGCATTGCCTGATTTTATTGAAATAGAGATTGG-T  949

seq1  TTGAAAATCA-TTTTGGTGTTCTTTTTTTCTAGAAGTTATGAATTCCTTA  992
      |||||||||| |||||||||||||||||   |||||| ||||||||| ||
seq2  TTGAAAATCATTTTTGGTGTTCTTTTTTCTAAGAAGTAATGAATTCC-TA  998

seq1  ATCCTCGAAG-TATTTTTAG-AAATGTTCTTTAACTTTCTT-AGAAATC-  1038
      |||||||||| ||||||||| |||||||| ||||| ||||| ||||||| 
seq2  ATCCTCGAAGCTATTTTTAGAAAATGTTC-TTAACCTTCTTAAGAAATCT  1047

seq1  TCCCAAAAGTACTGGAAATTTAAAAGAAAAACCTGCTTGTATAAAA--TG  1086
      ||| ||| |||||  | | |||||||||||||||||||| ||||||  ||
seq2  TCCTAAATGTACTCTATA-TTAAAAGAAAAACCTGCTTGGATAAAAATTG  1096

seq1  TATACTCTTACAAATATCT  1105
      ||| ||||||| |||||||
seq2  TATCCTCTTACCAATATCT  1115


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