BAC Information

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BAC

Clone NameB6Ng01-189N14
Chromosome16 (Build37)
Map Location 64,407,369 - 64,408,542
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha3, LOC100043540
Downstream geneCkt2, 4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189N14.bB6Ng01-189N14.g
ACCGA013759GA013760
length1,0921,190
definitionB6Ng01-189N14.b B6Ng01-189N14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgagcttctgggctaatagccacttatcagtaagtgcatatcat
gtgtgttcttttgtgattcagttacctcactcacgatgatatccttcaga
tccatccatttgtccaagtatttcataaattcattgtttttaattggtac
atactactccattgtgtaaatgtactatattttctgtatccattcctctg
ttgagggacatctggggcctttccatgtcctggctattataaattaggct
gatatggacatagtggagcatatgtctttattacatgttggatcattttc
tgtgtatatgctcagaaatggtattgctgaatcttctggtagtactatgt
ccaattttcttttgctctgtaccccatttttaatagggttatttggctgt
cttgagttctttgtacatattggatattatccctctatcagatttaggat
tgggaaacaacattttattgttgagaacagtttttgctatcctaagtttt
ttgatactccaggtgaattttcatattgccctttctaactctatgaagaa
ctgagttggaaatttgatggggattacattgaatctgtaaattgcttttg
gcaaggtagtcattttgaccatattaatcctgtcaatccatgagcatggg
agatctttccatcttttgagatcttcaatttctttctttagagacttgaa
gttcttatcatacagatctttcacttgcttagtcagagtcataccaaggt
agtttatattatttatgactattgtaaagggtgttgtttcccctaatttc
tttctcagcctgtttatcctttgtgtagagaaaggtcagtgatttgtttt
agttaattttatatccagctactttgctgaagttatttatcaggtttagg
agttctctggtggaatttttggggtcactcatgtatactatcattatcat
ctgcaaataggtggtatttttacttctctagtttataatccctttgattt
cctttggtgtctaatttcctctggcctaagacttcaagtactatatgaat
aggtaaggggagagaaaagagtggggcagccttgttctagtc
gaattccttgatcaacctaaatgtgacatggaatgtcacaaatgttgatt
gcttatgaggagctctcaaattacactgttcacaaaggtattgtgggcac
agaaaacagcttcatatgtagaaaatatctattctgcggagggtgactca
gcccttaccatgacaagagagatgtaaacggccaagtagaaccagacaga
ctgttggtacacctgagaaatagcctctcttgtattggattccatgtgct
aagcgatggtatggagattaagacagagctagaaaaaaatgtaattcaag
aagacaggtgtcatagggaacacagaggtctgcatattgggaggcgaaaa
agaaagtagaggctagatatgacacctggaggctaagaacagagaagttt
aggagttttctggaaagaaaatattcaaatgttgatgaaatctctctttc
agatctctaacggaatatggagaacaatcttcatctattgctgctgtatt
tgtgttatatagattatgctcagtggagggataagaattccaaggatgca
gggagaaaggttgtgttaatatccgatacagaggactgtaactcttacag
agaaagttccaattacttccaagttccatgtgattttctcactatatctt
ctccataaacctacactctcttgtttttttttttttttctgtcttttatc
acaacctgggatgctgcagaagatgaataccactaaaaatgaagagaaag
ggaaagaaagaatgaaaaaaaattgctcaatgcctttatactttatgcca
aaccaaagtataacaatagaaaaattataaaatgttcataatgacagtaa
gagttacatattgaatactggtggactagctttttaagaaagggtgtcac
tcccaacataaacctatggcatgtattcccattactgagaagaatactga
tgatttgcagaggggtggagctttgaagggttatgcctttgactgacggc
tggcgggattggtgttgtctgcactaatatccctctgaatttaacacaca
atgggcatctggcagatcctttacccaaaccgttccctttcagtgttgcc
tgcctcccggagggccttcgctctcctctttcattctcaattcatagaat
cttattccaactggataccttgtaaacttccacatggctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_64407369_64408542
seq2: B6Ng01-189N14.g_68_1257 (reverse)

seq1  CAGCCATGTG--ATTTTACAA-GTATCAAAGTAGAAATAAGAATTTTACT  47
      ||||||||||  | ||||||| |||||  ||| | |||||||    | ||
seq2  CAGCCATGTGGAAGTTTACAAGGTATC-CAGTTGGAATAAGA----TTCT  45

seq1  ATGAAAATGGAAGATGAAAGAGGAGA-CGAA-GCCCTCGGGGAGGCA-GC  94
      |||  ||| ||  ||||||||||||| |||| |||||| |||||||| ||
seq2  ATG--AATTGAGAATGAAAGAGGAGAGCGAAGGCCCTCCGGGAGGCAGGC  93

seq1  AACACTGAA--GGGACGGGTTGGGGTAAGGATCTG-CAGATGCC--ATGT  139
      |||||||||  || |||| |||||  ||||||||| ||||||||   |||
seq2  AACACTGAAAGGGAACGGTTTGGGTAAAGGATCTGCCAGATGCCCATTGT  143

seq1  GTGTT-AATTCAGAGGGGATATTAGTGCAGAC-ACACCAATCC--GCAGC  185
      ||||| |||||||| ||||||||||||||||| ||||||||||   ||||
seq2  GTGTTAAATTCAGA-GGGATATTAGTGCAGACAACACCAATCCCGCCAGC  192

seq1  CGTCAGTCAAAGGCATAA-CCTTC-AAGCTC--ACCCTCTGCAAATCATC  231
      |||||||||||||||||| ||||| ||||||   ||||||||||||||||
seq2  CGTCAGTCAAAGGCATAACCCTTCAAAGCTCCACCCCTCTGCAAATCATC  242

seq1  AGTA-TCTTCTCAGTAATGGGAATACATGCCATAGGTTTATGTTGGGAGT  280
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCTTCTCAGTAATGGGAATACATGCCATAGGTTTATGTTGGGAGT  292

seq1  GACA-CCTGTCTTAAAAAGCTAGTCCA-CAGTATTCAATATGTAACTCTT  328
      |||| ||| |||||||||||||||||| ||||||||||||||||||||||
seq2  GACACCCTTTCTTAAAAAGCTAGTCCACCAGTATTCAATATGTAACTCTT  342

seq1  ACTGTCATTATGAACATTTTATAATTTTTCTATTGTTATACTTTGGTTTG  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCATTATGAACATTTTATAATTTTTCTATTGTTATACTTTGGTTTG  392

seq1  GCAT-AAGTAT-AAGGCATTGAGCAATTTTTTTTCATTCTTTCTTTCCCT  426
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCATAAAGTATAAAGGCATTGAGCAATTTTTTTTCATTCTTTCTTTCCCT  442

seq1  TTCTCTTCATTTTTAGTGGTATTCATCTTCTGCAGCATCCCAGGTTGTGA  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCATTTTTAGTGGTATTCATCTTCTGCAGCATCCCAGGTTGTGA  492

seq1  TAAAAGACAGAAAAAAAAAAAAAAACAAGAGAGTGTAGGTTTATGGAGAA  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGACAGAAAAAAAAAAAAAAACAAGAGAGTGTAGGTTTATGGAGAA  542

seq1  GATATAGTGAGAAAATCACATGGAACTTGGAAGTAATTGGAACTTTCTCT  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGTGAGAAAATCACATGGAACTTGGAAGTAATTGGAACTTTCTCT  592

seq1  GTAAGAGTTACAGTCCTCTGTATCGGATATTAACACAACCTTTCTCCCTG  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGTTACAGTCCTCTGTATCGGATATTAACACAACCTTTCTCCCTG  642

seq1  CATCCTTGGAATTCTTATCCCTCCACTGAGCATAATCTATATAACACAAA  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTGGAATTCTTATCCCTCCACTGAGCATAATCTATATAACACAAA  692

seq1  TACAGCAGCAATAGATGAAGATTGTTCTCCATATTCCGTTAGAGATCTGA  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAGCAATAGATGAAGATTGTTCTCCATATTCCGTTAGAGATCTGA  742

seq1  AAGAGAGATTTCATCAACATTTGAATATTTTCTTTCCAGAAAACTCCTAA  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGATTTCATCAACATTTGAATATTTTCTTTCCAGAAAACTCCTAA  792

seq1  ACTTCTCTGTTCTTAGCCTCCAGGTGTCATATCTAGCCTCTACTTTCTTT  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTGTTCTTAGCCTCCAGGTGTCATATCTAGCCTCTACTTTCTTT  842

seq1  TTCGCCTCCCAATATGCAGACCTCTGTGTTCCCTATGACACCTGTCTTCT  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCCTCCCAATATGCAGACCTCTGTGTTCCCTATGACACCTGTCTTCT  892

seq1  TGAATTACATTTTTTTCTAGCTCTGTCTTAATCTCCATACCATCGCTTAG  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTACATTTTTTTCTAGCTCTGTCTTAATCTCCATACCATCGCTTAG  942

seq1  CACATGGAATCCAATACAAGAGAGGCTATTTCTCAGGTGTACCAACAGTC  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGAATCCAATACAAGAGAGGCTATTTCTCAGGTGTACCAACAGTC  992

seq1  TGTCTGGTTCTACTTGGCCGTTTACATCTCTCTTGTCATGGTAAGGGCTG  1026
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGTTCTACTTGGCCGTTTACATCTCTCTTGTCATGGTAAGGGCTG  1042

seq1  AGTCACCCTCCGCAGAATAGATATTTTCTACATATGAAGCTGTTTTCTGT  1076
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCCTCCGCAGAATAGATATTTTCTACATATGAAGCTGTTTTCTGT  1092

seq1  GCCCACAATACCTTTGTGAACAGTGTAATTTGAGAGCTCCTCATAAGCAA  1126
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACAATACCTTTGTGAACAGTGTAATTTGAGAGCTCCTCATAAGCAA  1142

seq1  TCAACATTTGTGACATTCCATGTCACATTTAGGTTGATCAAGGAATTC  1174
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATTTGTGACATTCCATGTCACATTTAGGTTGATCAAGGAATTC  1190