BAC Information

Click to search

BAC

Clone NameB6Ng01-191A09
Chromosome16 (Build37)
Map Location 7,166,722 - 7,294,639
singlet/doubletdoublet
Overlap geneA2bp1
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191A09.bB6Ng01-191A09.g
ACCGA014631GA014632
length1,1811,085
definitionB6Ng01-191A09.b B6Ng01-191A09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,293,457 - 7,294,639)(7,166,722 - 7,167,807)
sequence
gaattccaggatagattggtgggaggctcctcaggctctagccctggcag
agctgttggcaatcggtggctactgggccgaggagggtcacggccacttt
tctctaagaatatgaccaccgatgggttcttcaagaccacagtggatcat
cccatgcaatactaactggaatcagtgggttaaagcaaacaaacaaacag
caaagagataaataaagacatgaattttgtggacgatatgatggagactg
cttgggataattgggagggagacttggggatgcatatgaggaagagaaaa
tggatacatggataaaattttcaaagacaaaaacagaaaagaaacagatt
ctctgagtaaagaaggttgtggcccgacaggcggagacgcctgttgaaca
gggggtgcgtacttaccattggtgtaggggttgacagtcttcttatttgt
catcacgcgtgctgtcgcattattaacctacacacatagaaaactcaagt
gagtttggacgccgaggccagcccgtgatccaattagttgcatgcattat
gactgttgttacttactgaaacaaacaacaataccaaaaacaaaaacaaa
aaaaaccccaaaacttaaaacaaaaactaaaatgcatttcaatttacaaa
tggcaatagatgcataaccccccaaatcatacatttttataattacattt
acttcataagcaatttaacttacaagtcatttcaataaagcaatgtcatc
tcatttaaaagtttaataaagagacagtaaaagcaaattaaaagatactg
cataattgaagatttaaaggcatgcgtgtgctccatggtaacacagaaac
aagaaataggttcttaaacaaaaagatcgagttaatatggaaagggcatg
cagtggaagaagagggaggagacaaagtacaggggacataaatgtcaagg
aaaaggacagacaaatttaagccgtgtgcaacacttcgggagggggaaca
ttggaagcacagtctagcattcacacttggaacaagagccttttacaatt
gcaagatttacgagtcatttcaagctttaagtcacagctaacaaaggtaa
aggataggtgcattggttaacacaatatgcagttaggtcctgatagaatg
gtcactgctcgtaacctagtcagtccgagtc

gaattcaccactttttccctctccttctcttcagatacccatagctcaat
atccccatgctaactggctctattggaagaaaaaaaaaaagcagagatca
taatattttccctgcatctacaaaagcagagtagtttttgggcattgaat
aagttcatcagattgacttctcaacgtgtgatcaacacagcatcagatgg
tagtggtgggctgtagggaaaatggctgccattgctggacttagagttgg
caaggcctccacactagaaatttcactgcacagaatgtgcagagaaattc
ctttaatgctcctgagattcagaacataggtgtcatcctcttgttcatga
ctttgtctatggggaaatgtttgaatcaaaccaaagatgaacaatgccct
ccatgtccacattgtttatgagtcctgtttccagacctcacttacagaag
tagattgttggacattttcaattggaaggtgcttattttccattctcctt
cacctgtgaagcctttttctttctcacatcttccccttcatttttctcat
ggaccagaacttttttcttctcatcagcagccaagtcaacaacagttctg
aggacttttccactggagccaggttctcttctactacttcatcttgtctg
aagcctgggttaactgggacttaactccttgtcaccggtactgtgtaaaa
tgactaattaatgcagcatgtagagcacaagagagacagcactggcagtg
acaaatagggcttttagtaaccagcaatgctcccagaatgtttgcatagt
gattgggacttccctaaatccatgtgaatttagaggaaagagggccttaa
cctgaccctctgtgactgagttcttgtcaattgagtttgttcaactttga
gagctacttcaaccaaggtgtccaggaattagaaaaggcacgtggtccta
attttccaagttcaagaggtaatagcataataagccatgccttgtctata
gaactacaggcatatttctgcaagttgttcctcccacccgatttatctat
aattgactatgtggtaaggagatagcctgagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_7293457_7294639
seq2: B6Ng01-191A09.b_46_1226 (reverse)

seq1  GACT-GGACTGA----GTTACGAGCAGTGCACATCTTACTCAGACCCTTA  45
      |||| |||||||    |||||||||||||  |||  || ||||  || ||
seq2  GACTCGGACTGACTAGGTTACGAGCAGTGACCATTCTA-TCAGGACC-TA  48

seq1  ACTCCATATTGTGTTACACAATGCACCCTCTCCTTTACCCTTTTGTTAGC  95
      ||| ||||||||||||  ||||||| ||| |||||||||  |||||||||
seq2  ACTGCATATTGTGTTAACCAATGCA-CCTATCCTTTACC--TTTGTTAGC  95

seq1  TGTGACTTTAAAGCTTG-AATGACTCGTTAATTCTTGCAA-TGTAAAAGG  143
      |||||| |||||||||| ||||||||| ||| |||||||| |||||||||
seq2  TGTGAC-TTAAAGCTTGAAATGACTCG-TAAATCTTGCAATTGTAAAAGG  143

seq1  CTCTTGTTCCAAGTGTTGAATGCTAGATGTTGCTTCCCAATGGTTCCCCC  193
      ||||||||||||||| |||||||||||   ||||| ||||| ||||||||
seq2  CTCTTGTTCCAAGTG-TGAATGCTAGACTGTGCTT-CCAAT-GTTCCCCC  190

seq1  TCCCGAAGTGTTGCACACGGCTTAAATTTGTCTGTCCCTTTCCTTGACAT  243
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCCCGAAGTGTTGCACACGGCTTAAATTTGTCTGTCCTTTTCCTTGACAT  240

seq1  TTATGTCCCCTGTACTTTGTCTCCTCCCTCTTC-TCCACTGCATGCCCCT  292
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  TTATGTCCCCTGTACTTTGTCTCCTCCCTCTTCTTCCACTGCATGCCCTT  290

seq1  TCCATATTAACTCGATCTTTTTGTTTAAGAACCTATTTCTTGTTTCTGTG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTAACTCGATCTTTTTGTTTAAGAACCTATTTCTTGTTTCTGTG  340

seq1  TTACCATGGAGCACACGCATGCCTTTAAATCTTCAATTATGCAGTATCTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATGGAGCACACGCATGCCTTTAAATCTTCAATTATGCAGTATCTT  390

seq1  TTAATTTGCTTTTACTGTCTCTTTATTAAACTTTTAAATGAGATGACATT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGCTTTTACTGTCTCTTTATTAAACTTTTAAATGAGATGACATT  440

seq1  GCTTTATTGAAATGACTTGTAAGTTAAATTGCTTATGAAGTAAATGTAAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATTGAAATGACTTGTAAGTTAAATTGCTTATGAAGTAAATGTAAT  490

seq1  TATAAAAATGTATGATTTGGGGGGTTATGCATCTATTGCCATTTGTAAAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAATGTATGATTTGGGGGGTTATGCATCTATTGCCATTTGTAAAT  540

seq1  TGAAATGCATTTTAGTTTTTGTTTTAAGTTTTGGGGTTTTTTTTGTTTTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCATTTTAGTTTTTGTTTTAAGTTTTGGGGTTTTTTTTGTTTTT  590

seq1  GTTTTTGGTATTGTTGTTTGTTTCAGTAAGTAACAACAGTCATAATGCAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGTATTGTTGTTTGTTTCAGTAAGTAACAACAGTCATAATGCAT  640

seq1  GCAACTAATTGGATCACGGGCTGGCCTCGGCGTCCAAACTCACTTGAGTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTAATTGGATCACGGGCTGGCCTCGGCGTCCAAACTCACTTGAGTT  690

seq1  TTCTATGTGTGTAGGTTAATAATGCGACAGCACGCGTGATGACAAATAAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTGTGTAGGTTAATAATGCGACAGCACGCGTGATGACAAATAAG  740

seq1  AAGACTGTCAACCCCTACACCAATGGTAAGTACGCACCCCCTGTTCAACA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTCAACCCCTACACCAATGGTAAGTACGCACCCCCTGTTCAACA  790

seq1  GGCGTCTCCGCCTGTCGGGCCACAACCTTCTTTACTCAGAGAATCTGTTT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTCTCCGCCTGTCGGGCCACAACCTTCTTTACTCAGAGAATCTGTTT  840

seq1  CTTTTCTGTTTTTGTCTTTGAAAATTTTATCCATGTATCCATTTTCTCTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGTTTTTGTCTTTGAAAATTTTATCCATGTATCCATTTTCTCTT  890

seq1  CCTCATATGCATCCCCAAGTCTCCCTCCCAATTATCCCAAGCAGTCTCCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATATGCATCCCCAAGTCTCCCTCCCAATTATCCCAAGCAGTCTCCA  940

seq1  TCATATCGTCCACAAAATTCATGTCTTTATTTATCTCTTTGCTGTTTGTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCGTCCACAAAATTCATGTCTTTATTTATCTCTTTGCTGTTTGTT  990

seq1  TGTTTGCTTTAACCCACTGATTCCAGTTAGTATTGCATGGGATGATCCAC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCTTTAACCCACTGATTCCAGTTAGTATTGCATGGGATGATCCAC  1040

seq1  TGTGGTCTTGAAGAACCCATCGGTGGTCATATTCTTAGAGAAAAGTGGCC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCTTGAAGAACCCATCGGTGGTCATATTCTTAGAGAAAAGTGGCC  1090

seq1  GTGACCCTCCTCGGCCCAGTAGCCACCGATTGCCAACAGCTCTGCCAGGG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCTCCTCGGCCCAGTAGCCACCGATTGCCAACAGCTCTGCCAGGG  1140

seq1  CTAGAGCCTGAGGAGCCTCCCACCAATCTATCCTGGAATTC  1183
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCCTGAGGAGCCTCCCACCAATCTATCCTGGAATTC  1181


seq1: chr16_7166722_7167807
seq2: B6Ng01-191A09.g_63_1147

seq1  GAATTCACCACTTTTTCCCTCTCCTTCTCTTCAGATACCCATAGCTCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCACTTTTTCCCTCTCCTTCTCTTCAGATACCCATAGCTCAAT  50

seq1  ATCCCCATGCTAACTGGCTCTATTGGAAGAAAAAAAAAAAGCAGAGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCATGCTAACTGGCTCTATTGGAAGAAAAAAAAAAAGCAGAGATCA  100

seq1  TAATATTTTCCCTGCATCTACAAAAGCAGAGTAGTTTTTGGGCATTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTCCCTGCATCTACAAAAGCAGAGTAGTTTTTGGGCATTGAAT  150

seq1  AAGTTCATCAGATTGACTTCTCAACGTGTGATCAACACAGCATCAGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCATCAGATTGACTTCTCAACGTGTGATCAACACAGCATCAGATGG  200

seq1  TAGTGGTGGGCTGTAGGGAAAATGGCTGCCATTGCTGGACTTAGAGTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTGGGCTGTAGGGAAAATGGCTGCCATTGCTGGACTTAGAGTTGG  250

seq1  CAAGGCCTCCACACTAGAAATTTCACTGCACAGAATGTGCAGAGAAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCTCCACACTAGAAATTTCACTGCACAGAATGTGCAGAGAAATTC  300

seq1  CTTTAATGCTCCTGAGATTCAGAACATAGGTGTCATCCTCTTGTTCATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATGCTCCTGAGATTCAGAACATAGGTGTCATCCTCTTGTTCATGA  350

seq1  CTTTGTCTATGGGGAAATGTTTGAATCAAACCAAAGATGAACAATGCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTATGGGGAAATGTTTGAATCAAACCAAAGATGAACAATGCCCT  400

seq1  CCATGTCCACATTGTTTATGAGTCCTGTTTCCAGACCTCACTTACAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCCACATTGTTTATGAGTCCTGTTTCCAGACCTCACTTACAGAAG  450

seq1  TAGATTGTTGGACATTTTCAATTGGAAGGTGCTTATTTTCCATTCTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGTTGGACATTTTCAATTGGAAGGTGCTTATTTTCCATTCTCCTT  500

seq1  CACCTGTGAAGCCTTTTTCTTTCTCACATCTTCCCCTTCATTTTTCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTGAAGCCTTTTTCTTTCTCACATCTTCCCCTTCATTTTTCTCAT  550

seq1  GGACCAGAACTTTTTTCTTCTCATCAGCAGCCAAGTCAACAACAGTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGAACTTTTTTCTTCTCATCAGCAGCCAAGTCAACAACAGTTCTG  600

seq1  AGGACTTTTCCACTGGAGCCAGGTTCTCTTCTACTACTTCATCTTGTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTTTCCACTGGAGCCAGGTTCTCTTCTACTACTTCATCTTGTCTG  650

seq1  AAGCCTGGGTTAACTGGGACTTAACTCCTTGTCACCGGTACTGTGTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGGGTTAACTGGGACTTAACTCCTTGTCACCGGTACTGTGTAAAA  700

seq1  TGACTAATTAATGCAGCATGTAGAGCACAAGAGAGACAGCACTGGCAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAATTAATGCAGCATGTAGAGCACAAGAGAGACAGCACTGGCAGTG  750

seq1  ACAAATAGGGCTTTTAGTAACCAGCAATGCTCCCAGAATGTTTGCATAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAGGGCTTTTAGTAACCAGCAATGCTCCCAGAATGTTTGCATAGT  800

seq1  GATTGGGACTTCCCTAAATCCATGTGAATTTAGAGGAAAGAGGGCCTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGACTTCCCTAAATCCATGTGAATTTAGAGGAAAGAGGGCCTTAA  850

seq1  CCTGACCCTCTGTGACTGAGTTCTTGTCAATTGAGTTTG-TCAAC-TTGA  898
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  CCTGACCCTCTGTGACTGAGTTCTTGTCAATTGAGTTTGTTCAACTTTGA  900

seq1  GAGCTACCTCAACCAAGGTGTCCAGGAA-TAGAAAAGGCACGTGGTCCTA  947
      ||||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  GAGCTACTTCAACCAAGGTGTCCAGGAATTAGAAAAGGCACGTGGTCCTA  950

seq1  ATCTCCCAAGTTCAAGAGGT-ATAGCATAAT-AGCCATG-CTTGTCTAAT  994
      || | ||||||||||||||| |||||||||| ||||||| ||||||| ||
seq2  ATTTTCCAAGTTCAAGAGGTAATAGCATAATAAGCCATGCCTTGTCT-AT  999

seq1  AGAACTACAGGCATATTTCCTGCAAGTTGTCCTCCCCACCCGAATTTATC  1044
      |||||||||||||||||| ||||||||||| |  |||||||| |||||||
seq2  AGAACTACAGGCATATTT-CTGCAAGTTGTTCCTCCCACCCG-ATTTATC  1047

seq1  TATAAATGAACTATGTTGGGTAAGGGAGATAGGCTGAGAAAA  1086
      ||||| || |||||||  ||||| |||||||| |||||||||
seq2  TATAATTG-ACTATGT--GGTAA-GGAGATAGCCTGAGAAAA  1085


| Home | SequenceCutter | Blast | Download |