BAC Information

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BAC

Clone NameB6Ng01-191N10
Chromosome6 (Build37)16 (Build37)
Map Location 148,528,855 - 148,528,92187,499,552 - 87,499,778
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCcdc91, LOC100039712, LOC100039727, LOC100039736, Mlstd1, Ergic2, Tmtc1, 1110033J19Rik
Downstream geneEG622319, LOC100042984, LOC665372, Ipo8, Caprin2, EG665395, Tera, LOC667138, D030011O10Rik, 4833442J19Rik, C730024G19Rik, 2810474O19Rik, LOC665426, LOC622481, LOC665441, Bicd1, LOC667182, LOC100039850
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191N10.bB6Ng01-191N10.g
ACCGA015233GA015234
length300228
definitionB6Ng01-191N10.b B6Ng01-191N10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(148,528,855 - 148,528,921)(87,499,552 - 87,499,778)
sequence
gaattcaaacccccctggaactcacatggagctgatgtgtgctggaaccc
tggtgttcctatggtgaggtcagagcctgagacaggagaacccctgaaag
caagtgtgctagctagcctggggtacacgggtacacactagtgagcagga
gattctgtctcaaacaagacagaaggtagggaccagaatccaaggttagc
ctcagacctccacacctgcaccaggccacacatatgcctactcttaagca
cacataagaacatagtctctctctctctctctctctctctctctctctct

ctcagttaatctaaaatcagatagatgtttgttattttggagatagggtg
tcttttttacttttccattgtcaaaactccacgaacaagacaatttataa
aagaaaagcgttcactgggtcttgcagtttcagagggctagagtacattg
gcagggcaaacctgagagctaagagctcacgtcttgatccacaagtaggc
agagaaagagagaggggggggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_148528855_148528921
seq2: B6Ng01-191N10.b_268_336 (reverse)

seq1  AGAGAGAGAGAGAGTGGGGGCTCTGGATGCACAGAGAGAGAGAGAGAGAG  50
      ||||||||||||||                  ||||||||||||||||||
seq2  AGAGAGAGAGAGAG------------------AGAGAGAGAGAGAGAGAG  32

seq1  AGACTAT--------------------GAAGGCATAT  67
      |||||||                    | ||||||||
seq2  AGACTATGTTCTTATGTGTGCTTAAGAGTAGGCATAT  69

seq1: chr16_87499552_87499778
seq2: B6Ng01-191N10.g_68_294

seq1  TCAGTTAATCTAAAATCAGATAGATGTTTGTTATTTTGGAGATAGGGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAATCTAAAATCAGATAGATGTTTGTTATTTTGGAGATAGGGTGT  50

seq1  CTTTTTTACTTTTCCATTGTCAAAACTCCACGAACAAGACAATTTATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTACTTTTCCATTGTCAAAACTCCACGAACAAGACAATTTATAAA  100

seq1  AGAAAAGCGTTCACTGGGTCTTGCAGTTTCAGAGGGCTAGAGTACATTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGCGTTCACTGGGTCTTGCAGTTTCAGAGGGCTAGAGTACATTGG  150

seq1  CAGGGCAAACCTGAGAGCTAAGAGCTCACGTCTTGATCCACAAGTAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCAAACCTGAGAGCTAAGAGCTCACGTCTTGATCCACAAGTAGGCA  200

seq1  GAGAAAGAGAGAGGGGGGGGAGGGAGG  227
      |||||||||||||||||||||||||||
seq2  GAGAAAGAGAGAGGGGGGGGAGGGAGG  227