BAC Information

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BAC

Clone NameB6Ng01-192F21
Chromosome16 (Build37)
Map Location 60,503,562 - 60,504,738
singlet/doubletsinglet
Overlap geneEpha6
Upstream geneBC043118, LOC672884, Arl6, LOC100043804
Downstream geneEG668168, LOC668170, LOC100043524, LOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192F21.bB6Ng01-192F21.g
ACCGA015624GA015625
length1,1691,164
definitionB6Ng01-192F21.b B6Ng01-192F21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacatcatttggaaatttttcattcacagtaggactgaaaacat
aaactgccccactttttactactttctctactttgagcacagatatgttt
aagcataatttatgcaaaggcaaattcattcttatatctctgattgattc
atatttgtcatagatttataacagtaatacaatttaataaacatagtatt
tgcaaaatgttgcaatgttgtttttcatgatttttctttctcaacaggta
tgttctgtaatagactgaattctacagtgtcacgtttattccttagtatt
tatttatttattgtgtaggagctatgtgtcataatatacaggttaaggag
ggggaaactcgcaggagtcttttcttacctcccacaatctggatccctgg
gatctaagtcaggtaatgaggcttgctggcaagttcccttatccactgag
ccatctcattttgccatgtataaatttttagaaagcttaaattttatatt
acatgcttttataatgcatactttgaggaaaattttaaattagttctcat
gtaatgtcaggagagtaaaactgtatatgtaaattcttctcaacttttat
tggttccattttcacctttgatggtgtccttcatgaaaaccctgggtacc
tgcaggtagggatgcaatgggatgtagagcaacagaaagtgggattcagt
gagtgagaggatcattgcacataaagagaattatttgactttttttccaa
gtttttcaacaaaggaaaagattttctctgtgttcttattcttctcaatg
attgatgcatgtgaaagaaaagctatttgggtttattgtgaggccctagg
agaggaagggatcatcctaatctcgtataaggagatggctttgttggaat
taatctgctagtgccagaaatacagtgttcagtgggtttgtaaagtaact
ggagattttgggaagctgaacagagatgagtttgattgcattgatcacta
gtcagaaaacagtctttattctcagcatagaatatctactatgagagatg
tagattttgatgaagacaaattttgtgatatttagctcattaatattatg
ctatcatatcctttttccaattttccacacaaccacagcctactggatcc
aatgatctcttgtccgtgt
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcatcatccttaatgatcagggaaatgcaaatcaaaacaaccctgagat
tacacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgacgaggatgtggagaaagaggaacactcctccattgttggtg
gaattgcaagcttgtacaaacactctggaaatcagtctggtagttcctca
gaaaattggactactggaggatcccgcaatgcctcttctgggcatatatc
cagaagatgttcaaaccagtaagaaggatacatgctccactatgttcata
gcagccttatttataatagccagaagctggaaagaacccagatgcccctc
aacagaggaatggatacagaaaatgtggtacatttacacaatggagtact
actcagatattaaaaagaatgaattcttgaaattcctaggcaagtggatt
gacctggagggcatcatcttgagtgaggtaacccaatcacaaaaaaacct
cacacagtatgtactcactgataagtggatattattgcagaaacttagaa
tacccaagatataagataccatttgctaaacacatgaaacacaagaagaa
cgaagaccaaagtgtggatactttgccccttcttagaattgggaacaaaa
cacctatggaaggagttacagagacacagtttggagctaacatcaaagca
tggaccatgtagagactgccatattggggacccatcccataatcagcctc
caaatgctgacaccattgcatacactagcaagattttgctgaagggaccc
tgatatagctgtctcttgtgagactatgctggggcctagcaaacacagaa
tggatgctcacagtcagctattggatggatcacagggcccccaatggagg
aactagagaaagtaaccaagagctaaatggatctgcaaccctataggtga
cacatagactaccagtatccccaggagctgtgctctagctgcatatgtat
cagagatgactagtgtcatcaatgaagaagagcccaatgttctgcaactt
atctgctcagttaggaaccccaagccagcagtggagtgtgcttcggctgg
cggcatcacgctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_60503562_60504738
seq2: B6Ng01-192F21.b_44_1212 (reverse)

seq1  ACACGGAC-AGAGATTATATGGATTCAGTAGGGTGTGTGTGTGTGTGAAT  49
      |||||||| |||||| || ||||| ||||||| ||||  |||||| ||| 
seq2  ACACGGACAAGAGATCAT-TGGATCCAGTAGGCTGTGGTTGTGTG-GAAA  48

seq1  ATATGAAAAAAGATAAGGATAGCATAATAATAATGAGCTAAATTATCACA  99
      ||  |||||| ||| | |||||||||||| |||||||||||| |||||||
seq2  ATTGGAAAAAGGAT-ATGATAGCATAATATTAATGAGCTAAA-TATCACA  96

seq1  AAATTTGTCTTTCATCAAAATCTACATCTCTCAATAGTAGATATCTAATG  149
      ||||||||| |||||||||||||||||||||| |||||||||||   |||
seq2  AAATTTGTC-TTCATCAAAATCTACATCTCTC-ATAGTAGATATTCTATG  144

seq1  CTGAAGGAATAAAGACTG-TTTCTGACTAGTTGAATCAATGCAATCAAAC  198
      ||||  |||||||||||| ||||||||||||   ||||||||||||||||
seq2  CTGA--GAATAAAGACTGTTTTCTGACTAGT--GATCAATGCAATCAAAC  190

seq1  TCATCTCTGTTCAGCTTCCCAAAATCTCCAGTTACTTTACAAA-CCACTG  247
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCATCTCTGTTCAGCTTCCCAAAATCTCCAGTTACTTTACAAACCCACTG  240

seq1  AACACTGTATTTCTGGCACCTAGCAGATTAATTCCAACAAAGCCATCTCC  297
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AACACTGTATTTCTGGCA-CTAGCAGATTAATTCCAACAAAGCCATCTCC  289

seq1  TTATACGAGATTAGGATGATCCCTTCCTCTCCTAGGGCCTCACAATAAAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACGAGATTAGGATGATCCCTTCCTCTCCTAGGGCCTCACAATAAAC  339

seq1  CCAAATAGCTTTTCTTTCACATGCATCAATCATTGAGAAGAATAAGAACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAGCTTTTCTTTCACATGCATCAATCATTGAGAAGAATAAGAACA  389

seq1  CAGAGAAAATCTTTTCCTTTGTTGAAAAACTTGGAAAAAAAGTCAAATAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAATCTTTTCCTTTGTTGAAAAACTTGGAAAAAAAGTCAAATAA  439

seq1  TTCTCTTTATGTGCAATGATCCTCTCACTCACTGAATCCCACTTTCTGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTATGTGCAATGATCCTCTCACTCACTGAATCCCACTTTCTGTT  489

seq1  GCTCTACATCCCATTGCATCCCTACCTGCAGGTACCCAGGGTTTTCATGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACATCCCATTGCATCCCTACCTGCAGGTACCCAGGGTTTTCATGA  539

seq1  AGGACACCATCAAAGGTGAAAATGGAACCAATAAAAGTTGAGAAGAATTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACCATCAAAGGTGAAAATGGAACCAATAAAAGTTGAGAAGAATTT  589

seq1  ACATATACAGTTTTACTCTCCTGACATTACATGAGAACTAATTTAAAATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATACAGTTTTACTCTCCTGACATTACATGAGAACTAATTTAAAATT  639

seq1  TTCCTCAAAGTATGCATTATAAAAGCATGTAATATAAAATTTAAGCTTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAAAGTATGCATTATAAAAGCATGTAATATAAAATTTAAGCTTTC  689

seq1  TAAAAATTTATACATGGCAAAATGAGATGGCTCAGTGGATAAGGGAACTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTTATACATGGCAAAATGAGATGGCTCAGTGGATAAGGGAACTT  739

seq1  GCCAGCAAGCCTCATTACCTGACTTAGATCCCAGGGATCCAGATTGTGGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAAGCCTCATTACCTGACTTAGATCCCAGGGATCCAGATTGTGGG  789

seq1  AGGTAAGAAAAGACTCCTGCGAGTTTCCCCCTCCTTAACCTGTATATTAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGAAAAGACTCCTGCGAGTTTCCCCCTCCTTAACCTGTATATTAT  839

seq1  GACACATAGCTCCTACACAATAAATAAATAAATACTAAGGAATAAACGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATAGCTCCTACACAATAAATAAATAAATACTAAGGAATAAACGTG  889

seq1  ACACTGTAGAATTCAGTCTATTACAGAACATACCTGTTGAGAAAGAAAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTAGAATTCAGTCTATTACAGAACATACCTGTTGAGAAAGAAAAA  939

seq1  TCATGAAAAACAACATTGCAACATTTTGCAAATACTATGTTTATTAAATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAAAACAACATTGCAACATTTTGCAAATACTATGTTTATTAAATT  989

seq1  GTATTACTGTTATAAATCTATGACAAATATGAATCAATCAGAGATATAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACTGTTATAAATCTATGACAAATATGAATCAATCAGAGATATAAG  1039

seq1  AATGAATTTGCCTTTGCATAAATTATGCTTAAACATATCTGTGCTCAAAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTTGCCTTTGCATAAATTATGCTTAAACATATCTGTGCTCAAAG  1089

seq1  TAGAGAAAGTAGTAAAAAGTGGGGCAGTTTATGTTTTCAGTCCTACTGTG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAAGTAGTAAAAAGTGGGGCAGTTTATGTTTTCAGTCCTACTGTG  1139

seq1  AATGAAAAATTTCCAAATGATGTAGAATTC  1177
      ||||||||||||||||||||||||||||||
seq2  AATGAAAAATTTCCAAATGATGTAGAATTC  1169