BAC Information

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BAC

Clone NameB6Ng01-192P21
Chromosome16 (Build37)
Map Location 48,371,353 - 48,372,492
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628776, EG667741, EG639644, EG637273, Dppa4, Dppa2
Downstream geneEG433023, Morc1, Trat1, EG667501, Retnlb, Retnla, Retnlg, 2310047C04Rik, C330027C09Rik, Myh15, 1700026J12Rik, LOC386061
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192P21.bB6Ng01-192P21.g
ACCGA016088GA016089
length1,1511,166
definitionB6Ng01-192P21.b B6Ng01-192P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaaacccttgagacttatggtcctgcgaatgctgcccagagat
gctttcagtcagggcttcagactagaattcccatcttttactctgcttgt
aggtcaacttctccagcattgttccatgtctctgagttgacccgaccatc
agtcaattctgctgggatgtcctctctgcttgtaccacatgtctttgcat
aactttaattttgtaactaaaatgctggcttgttcaaatggaggtaataa
accccagtcctttcagtgtggcttggggtcttggtcctgagagttaaaac
tgtcatgaaggctgttcccatgtgaagacaaatggaaaatgacagggaaa
tcgaaatgagagactgcagccccttctgaatgctctctgcattctgtttt
attcctgcagcccagtaacttgggaatctataggcagttgttaatggtta
ctagaggaaggagagacattttcttcagtggtgtagctatggtaatattc
ccacgctcctgaaatcacagctgtatccatgctccagtaagtaattctaa
tgaaattcatggcgtcatcaagaagagacaggaaagcagaagagagattt
agaaagaggaaagggatcagtgtgggtagcagggagatgaaaatgatcgg
gattcattacatacatgtatgagtatgttataatgaagtccatcattacc
taataatatatagtttatatatgctgttaacataaacaatgggctgacat
tattactcagtggtagaaggcttgtctagcatgtgtgaggtccagcactg
aaaaaacaaaaaataaaaagagtgcaagagggctggagatgtggcttagt
gggttaagagaaccaaatgctcttccagaggtcctgagttcgattcccag
caaccacatggtggctcacaaccatctgtaatggaatgccctcttctggt
gcgtctgaagaacagtgaactcataatatgtaataataaataaatcttta
aaaagaaaggaaaaagaatccaagccatgtatcaaggtagttaagataga
ggcctctagaacccttgatgaccacaggctactacatgtccttggaatcc
ctactttccataggctgtttttaaggaattcaaatttggcaatcttcata
a
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagatggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagagatccaccccataatc
agcatccaaacactgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctccacagtcagctaatggatgggatcataggggctc
ccaatgggagagctagagaaagtagcaaggagctaaagggatctgcaacc
ctatagtgacacattatgactaacaagtaaccctgagctcttgactctag
ctgcatatgtattcaaaggattggcttagtcggcaatcacttgagagaag
tccaattgcactggaacttaattgccagtacatggtacacatggtccata
tgagtgaagatgtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_48371353_48372492
seq2: B6Ng01-192P21.b_49_1199 (reverse)

seq1  TTATAGAAGAT--GCAAATTTGAATACATTAAAAACAG-CTATG--AAGT  45
      |||| ||||||   ||||||||||| | |||||||||| |||||  ||||
seq2  TTAT-GAAGATTGCCAAATTTGAATTCCTTAAAAACAGCCTATGGAAAGT  49

seq1  AGGAATTCC-AGGACAATGTAGTAACCCTGTGGTCATCA--GTGTCTAGA  92
      ||| ||||| ||||| ||||||| | |||||||||||||  |  ||||||
seq2  AGGGATTCCAAGGAC-ATGTAGT-AGCCTGTGGTCATCAAGGGTTCTAGA  97

seq1  -GCCTCTATCTT-ACTACCCTTGATACATGGCTTGAATTC-TTTTCTTTT  139
       ||||||||||| |||| ||||||||||||||||| |||| ||||| |||
seq2  GGCCTCTATCTTAACTA-CCTTGATACATGGCTTGGATTCTTTTTCCTTT  146

seq1  CTTTTTTAAAGATTTATTTA-TATTACATA-TATGAGTTCACTG-TCTTC  186
      | |||||||||||||||||| ||||||||| ||||||||||||| |||||
seq2  C-TTTTTAAAGATTTATTTATTATTACATATTATGAGTTCACTGTTCTTC  195

seq1  AGACGCACCAGAAGAGGGCA-TCCATTACAGATGGTTGTGAGCCACCATG  235
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGACGCACCAGAAGAGGGCATTCCATTACAGATGGTTGTGAGCCACCATG  245

seq1  TGGTTGCTGGGAATCGAACTCAGGACCTCTGGAAGAGCATTTGGTTCTCT  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCTGGGAATCGAACTCAGGACCTCTGGAAGAGCATTTGGTTCTCT  295

seq1  TAA-CCACTAAGCCACATCTCCAGCCCTCTTGCACTCTTTTTATTTTTTG  334
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCACTAAGCCACATCTCCAGCCCTCTTGCACTCTTTTTATTTTTTG  345

seq1  TTTTTTCAGTGCTGGACCTCACACATGCTAGACAAGCCTTCTACCACTGA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAGTGCTGGACCTCACACATGCTAGACAAGCCTTCTACCACTGA  395

seq1  GTAATAATGTCAGCCCATTGTTTATGTTAACAGCATATATAAACTATATA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAATGTCAGCCCATTGTTTATGTTAACAGCATATATAAACTATATA  445

seq1  TTATTAGGTAATGATGGACTTCATTATAACATACTCATACATGTATGTAA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGGTAATGATGGACTTCATTATAACATACTCATACATGTATGTAA  495

seq1  TGAATCCCGATCATTTTCATCTCCCTGCTACCCACACTGATCCCTTTCCT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCCGATCATTTTCATCTCCCTGCTACCCACACTGATCCCTTTCCT  545

seq1  CTTTCTAAATCTCTCTTCTGCTTTCCTGTCTCTTCTTGATGACGCCATGA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAAATCTCTCTTCTGCTTTCCTGTCTCTTCTTGATGACGCCATGA  595

seq1  ATTTCATTAGAATTACTTACTGGAGCATGGATACAGCTGTGATTTCAGGA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTAGAATTACTTACTGGAGCATGGATACAGCTGTGATTTCAGGA  645

seq1  GCGTGGGAATATTACCATAGCTACACCACTGAAGAAAATGTCTCTCCTTC  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGGAATATTACCATAGCTACACCACTGAAGAAAATGTCTCTCCTTC  695

seq1  CTCTAGTAACCATTAACAACTGCCTATAGATTCCCAAGTTACTGGGCTGC  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTAACCATTAACAACTGCCTATAGATTCCCAAGTTACTGGGCTGC  745

seq1  AGGAATAAAACAGAATGCAGAGAGCATTCAGAAGGGGCTGCAGTCTCTCA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAAAACAGAATGCAGAGAGCATTCAGAAGGGGCTGCAGTCTCTCA  795

seq1  TTTCGATTTCCCTGTCATTTTCCATTTGTCTTCACATGGGAACAGCCTTC  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGATTTCCCTGTCATTTTCCATTTGTCTTCACATGGGAACAGCCTTC  845

seq1  ATGACAGTTTTAACTCTCAGGACCAAGACCCCAAGCCACACTGAAAGGAC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGTTTTAACTCTCAGGACCAAGACCCCAAGCCACACTGAAAGGAC  895

seq1  TGGGGTTTATTACCTCCATTTGAACAAGCCAGCATTTTAGTTACAAAATT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTTATTACCTCCATTTGAACAAGCCAGCATTTTAGTTACAAAATT  945

seq1  AAAGTTATGCAAAGACATGTGGTACAAGCAGAGAGGACATCCCAGCAGAA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATGCAAAGACATGTGGTACAAGCAGAGAGGACATCCCAGCAGAA  995

seq1  TTGACTGATGGTCGGGTCAACTCAGAGACATGGAACAATGCTGGAGAAGT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGATGGTCGGGTCAACTCAGAGACATGGAACAATGCTGGAGAAGT  1045

seq1  TGACCTACAAGCAGAGTAAAAGATGGGAATTCTAGTCTGAAGCCCTGACT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTACAAGCAGAGTAAAAGATGGGAATTCTAGTCTGAAGCCCTGACT  1095

seq1  GAAAGCATCTCTGGGCAGCATTCGCAGGACCATAAGTCTCAAGGGTTTTG  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCATCTCTGGGCAGCATTCGCAGGACCATAAGTCTCAAGGGTTTTG  1145

seq1  GAATTC  1140
      ||||||
seq2  GAATTC  1151