BAC Information

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BAC

Clone NameB6Ng01-194B06
Chromosome16 (Build37)
Map Location 41,556,360 - 41,683,391
singlet/doubletdoublet
Overlap geneLsamp
Upstream geneEG667450
Downstream geneGap43
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194B06.bB6Ng01-194B06.g
ACCGA016871GA016872
length388682
definitionB6Ng01-194B06.b B6Ng01-194B06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,556,360 - 41,556,753)(41,682,710 - 41,683,391)
sequence
taaaagatataagctgttttgttcctgtaataggaaaaaagttttgtgat
ctacatacaaagattcttgagagagaatatggttggctttgtataaaagt
tgaaagaacagataatccagacaatagggctttatttttggcattttctc
accatcagatgcaaaacttaaacaagaaggcatgggatacattttggaga
acatcctgagttacctaataagactaagagagaaaaggaaacatttcaag
gaaaatagttataagtattttaagtcttcagcaatgtagcaagaatttgt
tcacagttgttacaaggaaagacaggtgttgaggaggaagagttatagaa
atgtacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

gaattctgtagtggggactctagtcatttatttccttaaatgaataaata
aattcatgcagagactcatagtttgccagcactttaaaactgccatttct
gagaggactagccttgtaaagtgacatcgctcacaaaatgtgtacaagag
aaggtatttttcgctcctgacctgcagagcagagagttaatttgaaattt
atctttgataatctcccctacttactttacgtatttcatttcttcagttt
agatggaatgtacactttataattaaatacaagtaggaaataatatcacc
cagacaaaagctcctaatctccacaagatattaatagtcagcgcatcaag
tcaattcatcttcaatcctggatctcactatgccacagcagcccatgaaa
atgaaaacgagacagtgtcaaccataactcctcaaatggtgactacagac
cacaacctgtgtttgcatagggtaaataaatcactagtacaggtaaagac
acggtgtgcatgactatgcccttcctcagaaaccaagaaaaacaatcccc
actaggaagaagtaagtcagatccctcatgtcagagctgctactatttaa
acgtgagctcttgagtaaatggacccatgtgcttttcagagttgttcaaa
gatatcaatagggcaatgtggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_41556360_41556753
seq2: B6Ng01-194B06.b_46_439

seq1  GAATTCTAAAAGATATAAGCTGTTTTGTTCCTGTAATAGGAAAAAAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAAGATATAAGCTGTTTTGTTCCTGTAATAGGAAAAAAGTTT  50

seq1  TGTGATCTACATACAAAGATTCTTGAGAGAGAATATGGTTGGCTTTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCTACATACAAAGATTCTTGAGAGAGAATATGGTTGGCTTTGTAT  100

seq1  AAAAGTTGAAAGAACAGATAATCCAGACAATAGGGCTTTATTTTTGGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGAAAGAACAGATAATCCAGACAATAGGGCTTTATTTTTGGCAT  150

seq1  TTTCTCACCATCAGATGCAAAACTTAAACAAGAAGGCATGGGATACATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACCATCAGATGCAAAACTTAAACAAGAAGGCATGGGATACATTT  200

seq1  TGGAGAACATCCTGAGTTACCTAATAAGACTAAGAGAGAAAAGGAAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAACATCCTGAGTTACCTAATAAGACTAAGAGAGAAAAGGAAACAT  250

seq1  TTCAAGGAAAATAGTTATAAGTATTTTAAGTCTTCAGCAATGTAGCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGAAAATAGTTATAAGTATTTTAAGTCTTCAGCAATGTAGCAAGA  300

seq1  ATTTGTTCACAGTTGTTACAAGGAAAGACAGGTGTTGAGGAGGAAGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCACAGTTGTTACAAGGAAAGACAGGTGTTGAGGAGGAAGAGTT  350

seq1  ATAGAAATGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  394
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  394


seq1: chr16_41682710_41683391
seq2: B6Ng01-194B06.g_67_748 (reverse)

seq1  CCCCCCCCCCCCCACATTGCCCTATTGATATCTTTGAACAACTCTGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCACATTGCCCTATTGATATCTTTGAACAACTCTGAAAA  50

seq1  GCACATGGGTCCATTTACTCAAGAGCTCACGTTTAAATAGTAGCAGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGGGTCCATTTACTCAAGAGCTCACGTTTAAATAGTAGCAGCTCT  100

seq1  GACATGAGGGATCTGACTTACTTCTTCCTAGTGGGGATTGTTTTTCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAGGGATCTGACTTACTTCTTCCTAGTGGGGATTGTTTTTCTTGG  150

seq1  TTTCTGAGGAAGGGCATAGTCATGCACACCGTGTCTTTACCTGTACTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGGAAGGGCATAGTCATGCACACCGTGTCTTTACCTGTACTAGT  200

seq1  GATTTATTTACCCTATGCAAACACAGGTTGTGGTCTGTAGTCACCATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTTACCCTATGCAAACACAGGTTGTGGTCTGTAGTCACCATTTG  250

seq1  AGGAGTTATGGTTGACACTGTCTCGTTTTCATTTTCATGGGCTGCTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTATGGTTGACACTGTCTCGTTTTCATTTTCATGGGCTGCTGTGG  300

seq1  CATAGTGAGATCCAGGATTGAAGATGAATTGACTTGATGCGCTGACTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGAGATCCAGGATTGAAGATGAATTGACTTGATGCGCTGACTATT  350

seq1  AATATCTTGTGGAGATTAGGAGCTTTTGTCTGGGTGATATTATTTCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTTGTGGAGATTAGGAGCTTTTGTCTGGGTGATATTATTTCCTAC  400

seq1  TTGTATTTAATTATAAAGTGTACATTCCATCTAAACTGAAGAAATGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTAATTATAAAGTGTACATTCCATCTAAACTGAAGAAATGAAAT  450

seq1  ACGTAAAGTAAGTAGGGGAGATTATCAAAGATAAATTTCAAATTAACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAAGTAAGTAGGGGAGATTATCAAAGATAAATTTCAAATTAACTCT  500

seq1  CTGCTCTGCAGGTCAGGAGCGAAAAATACCTTCTCTTGTACACATTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTGCAGGTCAGGAGCGAAAAATACCTTCTCTTGTACACATTTTGT  550

seq1  GAGCGATGTCACTTTACAAGGCTAGTCCTCTCAGAAATGGCAGTTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGATGTCACTTTACAAGGCTAGTCCTCTCAGAAATGGCAGTTTTAAA  600

seq1  GTGCTGGCAAACTATGAGTCTCTGCATGAATTTATTTATTCATTTAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGCAAACTATGAGTCTCTGCATGAATTTATTTATTCATTTAAGGA  650

seq1  AATAAATGACTAGAGTCCCCACTACAGAATTC  682
      ||||||||||||||||||||||||||||||||
seq2  AATAAATGACTAGAGTCCCCACTACAGAATTC  682


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