BAC Information

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BAC

Clone NameB6Ng01-194G02
Chromosome16 (Build37)
Map Location 57,657,218 - 57,658,321
singlet/doubletsinglet
Overlap geneCol8a1
Upstream geneAbi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik
Downstream geneLOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194G02.bB6Ng01-194G02.g
ACCGA017091GA017092
length1,1241,187
definitionB6Ng01-194G02.b B6Ng01-194G02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatggcaccacactctttcctgttcaggtgcaacaggaagatatc
tgaggagtcccaaggggttaacgcgtcacttggatgcacggcacaatgtc
atgagaatctgctttccttggagggcatcggctaacccagtgcaccgagt
tttgaaaggaagttcagttattagagtgaatattaactctaattgtgatt
catttcgctctgaagtttattatctgtttttttcccctcaagaagacatg
gacaccagatgagatatggttgaggaattataggagttagagggagagaa
ctttacaccccttttcccattaattacagtgacagcttgtttcccagtcc
caatgtgtgaactgactgagctgatgcagtttaagtttttgttttctagg
tgcttgacagtgacccagagccattctctcacatacagtgtgagaggaac
agaacccaggcctcctagacttggatccagactgcctcttactacctgta
taatgctacaatatgggaagaatattccttaaggagatcatatttggtaa
caaatgttgcaaagttgcctgccaactaggagaaactcagtaaaggacag
ctattacaacatacatcatctagttttatatacttaccagagttccagag
tccaaaggaagattatatacttcttctaatcaaccaattttgctacctta
tatgcactccgacaacaaaaattaaccataaaagaagcaatatcttctgg
gtttgaaaaattaacatctgatataaaatacatgtttagctttaggaagg
aagttcccaaggtaacagccattagaacttgaatttgatgtttaaaacac
cttctttgaaataaaaacagtagtggcgatgcttttaatatttagtgtag
gtatcagaagagacatcttgctacattagagaaataggatgaagatagga
gatggaaaacaccagaaaagagatagggagggagctaggaaaacattgtg
aggcttcctcagcacttgcccagttcaaaagcattggttaataagaaaat
taatgaagcaactgaacaagtacctctggcctagctttacctctgtcata
ggcctaactttattgaggaaaatg
gaattcctatacctgataaacaacttcagtgaagtagctggatataaaat
taactcaaacaaatcagtggcctttctctacacaaagataaacaggctga
gaaagaaattggggaaatcacaccttttacaatagtcacaaataatataa
aatacctttgtgtgactctaactaagcaagtgaaagatctttatgataag
aactgcaagtctctgaagaaagaaatcgaagatctcagaagatggaaaga
tcttccatactcatggattggcaggattaatgatattggtaatatagcca
ttttcataatattgattctaccaaaacagaaacaaggaaggcctgtcctt
ctagtgtcttctgtaatctctcttgtagcattttgctcctaaatttattt
caatatatctatttaaactattgtgtatatcattttatctttattttttc
taaacaagtttttaatattagcacataaaaacactggttttgtatttttg
ttttgattttgtatgtgctaacttgcacatgttcattagacctaaggatt
ttcaggtgatagtttcagtctttcaggcagaggtttatgtcatcctacaa
gagatggaattcaacttcttctttttctatgtctgtcccctttatttctt
tctctttatgtagcttagactctaagcattatgttgagtgaaagcagaga
aggggcatatttgtcttggtcatagttctagaagaaaaactgaatgtttc
cctattaattataatgttggtcatacttttgttctatatagcctttatta
tgtcaacagaggtttcatttatcactactttcttcagtatttttatcatc
aaatagtatcaatgcctttcacgcatctgtttagatgatcatgtgatctc
tgcccttttctcctttctgtgctgtattacatctattaatttacatatgc
tgagtcattcttgcatgtttggaatgacactaacttgagcatggtgtatt
accttaatgtgttcagaatctttattatttattattatttatatttatta
ttttaattagtattttcttggttacatttcaatgctatccagatctcgat
acccttcctcccctcaactcgtacgatcatcaattcttgtgacctggtac
atcctcgtgtaatggtagggactatatatcatgaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57657218_57658321
seq2: B6Ng01-194G02.b_44_1167

seq1  GAATTCATGGCACCACACTCTTTCCTGTTCAGGTGCAACAGGAAGATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGCACCACACTCTTTCCTGTTCAGGTGCAACAGGAAGATATC  50

seq1  TGAGGAGTCCCAAGGGGTTAACGCGTCACTTGGATGCACGGCACAATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGTCCCAAGGGGTTAACGCGTCACTTGGATGCACGGCACAATGTC  100

seq1  ATGAGAATCTGCTTTCCTTGGAGGGCATCGGCTAACCCAGTGCACCGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAATCTGCTTTCCTTGGAGGGCATCGGCTAACCCAGTGCACCGAGT  150

seq1  TTTGAAAGGAAGTTCAGTTATTAGAGTGAATATTAACTCTAATTGTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGGAAGTTCAGTTATTAGAGTGAATATTAACTCTAATTGTGATT  200

seq1  CATTTCGCTCTGAAGTTTATTATCTGTTTTTTTCCCCTCAAGAAGACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCGCTCTGAAGTTTATTATCTGTTTTTTTCCCCTCAAGAAGACATG  250

seq1  GACACCAGATGAGATATGGTTGAGGAATTATAGGAGTTAGAGGGAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAGATGAGATATGGTTGAGGAATTATAGGAGTTAGAGGGAGAGAA  300

seq1  CTTTACACCCCTTTTCCCATTAATTACAGTGACAGCTTGTTTCCCAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACACCCCTTTTCCCATTAATTACAGTGACAGCTTGTTTCCCAGTCC  350

seq1  CAATGTGTGAACTGACTGAGCTGATGCAGTTTAAGTTTTTGTTTTCTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGTGAACTGACTGAGCTGATGCAGTTTAAGTTTTTGTTTTCTAGG  400

seq1  TGCTTGACAGTGACCCAGAGCCATTCTCTCACATACAGTGTGAGAGGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGACAGTGACCCAGAGCCATTCTCTCACATACAGTGTGAGAGGAAC  450

seq1  AGAACCCAGGCCTCCTAGACTTGGATCCAGACTGCCTCTTACTACCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCAGGCCTCCTAGACTTGGATCCAGACTGCCTCTTACTACCTGTA  500

seq1  TAATGCTACAATATGGGAAGAATATTCCTTAAGGAGATCATATTTGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTACAATATGGGAAGAATATTCCTTAAGGAGATCATATTTGGTAA  550

seq1  CAAATGTTGCAAAGTTGCCTGCCAACTAGGAGAAACTCAGTAAAGGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTGCAAAGTTGCCTGCCAACTAGGAGAAACTCAGTAAAGGACAG  600

seq1  CTATTACAACATACATCATCTAGTTTTATATACTTACCAGAGTTCCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACAACATACATCATCTAGTTTTATATACTTACCAGAGTTCCAGAG  650

seq1  TCCAAAGGAAGATTATATACTTCTTCTAATCAACCAATTTTGCTACCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGGAAGATTATATACTTCTTCTAATCAACCAATTTTGCTACCTTA  700

seq1  TATGCACTCCGACAACAAAAATTAACCATAAAAGAAGCAATATCTTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACTCCGACAACAAAAATTAACCATAAAAGAAGCAATATCTTCTGG  750

seq1  GTTTGAAAAATTAACATCTGATATAAAATACATG-TTAGCTTTAGGAAGG  799
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTTTGAAAAATTAACATCTGATATAAAATACATGTTTAGCTTTAGGAAGG  800

seq1  AAGTTCCCAAGGTAACAGCCATTAGAACTTGAATTTGATGTTTAAAACAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCCAAGGTAACAGCCATTAGAACTTGAATTTGATGTTTAAAACAC  850

seq1  CTTC-TTGAAATAAAAACAGTAGTGGCGATGC-TTTAATATTTAGTGTAG  897
      |||| ||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTTCTTTGAAATAAAAACAGTAGTGGCGATGCTTTTAATATTTAGTGTAG  900

seq1  GTATCAGAAGAGACATC-TGCTACATTAGAGAAA-AGGATGAAGATAAGA  945
      ||||||||||||||||| |||||||||||||||| |||||||||||| ||
seq2  GTATCAGAAGAGACATCTTGCTACATTAGAGAAATAGGATGAAGATAGGA  950

seq1  GATGGAAAACA-CAGAAAAGAGATA-GGAGGGAGCTAGG-AAACAT--TG  990
      ||||||||||| ||||||||||||| ||||||||||||| ||||||  ||
seq2  GATGGAAAACACCAGAAAAGAGATAGGGAGGGAGCTAGGAAAACATTGTG  1000

seq1  AGGC-TCCTCAGCAC-TGGCCAGGTCAAAAGCATTGG-TAATAAG-AAAT  1036
      |||| |||||||||| || |||| ||||||||||||| ||||||| ||||
seq2  AGGCTTCCTCAGCACTTGCCCAGTTCAAAAGCATTGGTTAATAAGAAAAT  1050

seq1  TAATGAAGCAACTGAAC-AGTA-CTCTGG-CTAGC-TTACCTCTGTCATA  1082
      ||||||||||||||||| |||| |||||| ||||| ||||||||||||||
seq2  TAATGAAGCAACTGAACAAGTACCTCTGGCCTAGCTTTACCTCTGTCATA  1100

seq1  GG-CTAACTTTATTGA-GAAAATG  1104
      || ||||||||||||| |||||||
seq2  GGCCTAACTTTATTGAGGAAAATG  1124