BAC Information

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BAC

Clone NameB6Ng01-195N21
Chromosome16 (Build37)
Map Location 72,293,666 - 72,294,307
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneRobo1, LOC100039310, LOC100039318
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195N21.bB6Ng01-195N21.g
ACCGA018167GA018168
length6461,185
definitionB6Ng01-195N21.b B6Ng01-195N21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttatgaaaacttgaatccataaacaaaatgctataggctttgg
gtttaaaattttgtcattctcaaagcagagctaaaaagtaaatgatgtaa
cttcatttatttcagtccttaatcaggctaaaacccaaacactttaggta
cattttttgatcctaccaatatagcattatttctgatgttttttaaactt
aaaaaaaaaatttactagaaaatgtggacaaattcaatgctagttaaata
aaatgtatcatcatcatagtttgataaaaacatgtaatttatatcaattc
aaatcaaagttataatttaaaagttttaccccatggtagacattgtaaat
gtttcgtttattcagcagttataattgtcatctcataggtgtactgttga
atatcttgcccttttcaggtctttctgaactcagtctatctagctgattc
aactctggcccaaattcccctccaagttgactgattcctgattaaaatga
gtttctcccagcttctgactaaattgctctgcttggctgaaactaactct
ggcaatctgttttagtttttctggctctttctcattctatggctcattct
gcaacctgcctctgtaagactgtcccctgtaaaattagtgcctctt
gaattcctatcccccaaggggctgcaatcggtcctcctgttcttccatag
gagtccccactctttaaaagctgtggagacgttaaaagtctggtcaagtc
tttggcagtagatcactatgtgggcttttgaagggtgtaagaccctggtc
ttggtctatatgttgccttgtgaatgaaagcctgaaatgttctctctact
gttttcctattgtgatggaataaaatctcttaaatctaacctcaaatata
tatatttttttcctgaagctattaagccttttagattttggtcatagaaa
aaaaaggggggaagttagggaataatgtatctctccaagctattttttca
aatatttatataaacattctcagtttccttaatcatttctcaagttggct
ttcaaattggactgaactccggaagaaatctggaaataacacctttaata
atagcctcaaattctataaaatatccacaggtgactctaaccaagcagtg
aaagacttttatgataaagtttttaagacatataagagagaaactgaaga
agatataagttgaaaagatctcccattctaatggattggtaggattacta
tagtagaaatggccatcttgccaaattcaatctacatagtgaatacaacc
cctcttaaaatttcaatacatttctttccagattctgaaatccctgaaag
gataatttttagctccatatggaaataagcacacacacacacacacacac
acacacacacacacacacacacacaccagctaaaaaatcctgaataataa
tgataaggataataatgatagcaaaaggaagggttattactcactttcca
aacttactttgtacttacagagctatggtaacagccaactagcatgttat
tagcacaaaatacgggaatatttgatttcatgtgaaattgaaaatggaag
acccctaacacgattccacacattctaacaggacacctgagttttttata
aaggaagctctagaatacttaatgtaaaaatggacggccttcttcccacc
atatcgtcctgttcaatggctcttaccttttgaaagaatcccaaatagga
acccatatctgcgaagatgaatttattcccctgtaccagatctcactccc
aattgggagattgaaacagaacccctcactattac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_72293666_72294307
seq2: B6Ng01-195N21.b_37_682

seq1  GAATTCC-TATGAAAAC-TGAATCCATAAACAAAATGCTATAGGCTTTGG  48
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATGAAAACTTGAATCCATAAACAAAATGCTATAGGCTTTGG  50

seq1  GTTTAAAATTTTGTCATTCTCAAAGCAGAGCTAAAAAGTAAATGATGTAA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAATTTTGTCATTCTCAAAGCAGAGCTAAAAAGTAAATGATGTAA  100

seq1  CTTCATTTATTTCAGTCCTTAATCAGGCTAAAACCCAAACACTTTAGGTA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTATTTCAGTCCTTAATCAGGCTAAAACCCAAACACTTTAGGTA  150

seq1  CATTTTTTGATCCTACCAATATAGCATTATTTCTGATGTTTTTTAAACTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTGATCCTACCAATATAGCATTATTTCTGATGTTTTTTAAACTT  200

seq1  AAAAAAAAAATTTACTAGAAAATGTGGACAAATTCAATGCTAGTTAAATA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAATTTACTAGAAAATGTGGACAAATTCAATGCTAGTTAAATA  250

seq1  AAATGTATCATCATCATAGTTTGATAAAAACATGTAATTTATATCAATTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATCATCATCATAGTTTGATAAAAACATGTAATTTATATCAATTC  300

seq1  AAATCAAAGTTATAATTTAAAAGTTTTACCCCATGGTAGACATTGTAAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAAGTTATAATTTAAAAGTTTTACCCCATGGTAGACATTGTAAAT  350

seq1  GTTTCGTTTATTCAGCAGTTATAATTGTCATCTCATAGGTGTACTGTTGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCGTTTATTCAGCAGTTATAATTGTCATCTCATAGGTGTACTGTTGA  400

seq1  ATATCTTGCCCTTTTCAGGTCTTTCTGAACTCAGTCTATCTAGCTGATTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTGCCCTTTTCAGGTCTTTCTGAACTCAGTCTATCTAGCTGATTC  450

seq1  AACTCTGGCCCAAATTCCCCTCCAAGTTGACTGATTCCTGATTAAAATGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGCCCAAATTCCCCTCCAAGTTGACTGATTCCTGATTAAAATGA  500

seq1  GTTTCTCCCAGCTTCTGACTAAATTGCTCTGCTTGGCTGAAACTAACTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCCCAGCTTCTGACTAAATTGCTCTGCTTGGCTGAAACTAACTCT  550

seq1  GGCAATCTGTTTTAG-TTTTCTGGCTCTTTCTCATTCTATGGCTCATTCT  597
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGCAATCTGTTTTAGTTTTTCTGGCTCTTTCTCATTCTATGGCTCATTCT  600

seq1  GCAACCTGCCTCTGTAAGACTGT-CCCTGTAAAATTAGTGCCTCCT  642
      ||||||||||||||||||||||| |||||||||||||||||||| |
seq2  GCAACCTGCCTCTGTAAGACTGTCCCCTGTAAAATTAGTGCCTCTT  646