BAC Information

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BAC

Clone NameB6Ng01-196F24
Chromosome16 (Build37)
Map Location 28,823,797 - 28,867,707
singlet/doubletdoublet
Overlap gene1600021P15Rik
Upstream geneFgf12
Downstream geneEG666717, Hrasls, Atp13a5, Atp13a4, Opa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196F24.bB6Ng01-196F24.g
ACCGA018535GA018536
length1,128604
definitionB6Ng01-196F24.b B6Ng01-196F24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,823,797 - 28,824,925)(28,867,106 - 28,867,707)
sequence
gaattcctttaaaaaaaaaaaagaaggaaatttccctcagcaggatagac
atgtgaaccaataaaccaacaccatgttgtgaccagcaacctgaactgca
ccagaaagtgttacaaaagtcaatctggggaaatctccaatcagtgacat
ggaaggatctgtccatgtgcacaggtgatgtgcacaggtgatatggaagt
gagtgggaggcttgtgctagcccccatggctcctccttggtactcaggcc
cccacccaaagcacaattagccatgtaactccactattgtctgtttaatg
atctgcaaagtgacttcagaaatattttcacttttaaagtgtctcgactc
atgtggccccgctaactctcaaaccaacttttacctgcatctgtagacca
tccacttcagaagagaaaggcagagggcagagggcagaggaatatctact
cttgatataagtgagacctaggaccatgaaagagctaagagcctgctgaa
taataacctgtgaatgtctttttttaaaaaatcagacacatgtaattttg
aaattatagctccagccttaaggcactttatcttttattggaagcacaag
ttatgtaaagcgattttctgggctgaagacagactgttaagaactcaatg
ggatatgtataagggaaaggtattaaagctacactccattcacacaccct
tgacctcagagcgtcttcggtttgtggcctggaatcttggagattaaaca
atgggtgttaaaattaccaacacccggaggtctttgcacatttctgtatg
aaatatacatactgtgttctctactatgatgggggtgtggcaaatggggg
caggggcaatcaaaattattgcgctaaagctttattattcatgtaatgaa
attttggctgaaagtaaagcattttaaaatacaatggtggctaactgtat
ttgagatgttgttcctgagtatattctgggcagttgacctgacctcagag
cattgacttctggaatataatcgcccacatacagttatacttgacttgat
ttaatatatacaatatatcaatctggtcagaggtggaatcatctgtatca
gctgtaattacaggatacaagtatgaat
gaattctataacactagaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtatctgtgcctgtatctatatgactaatgttc
agatatctttgtatagatgtatctgcgtgcacaaaatatttctagaaact
tccatatttgttttcagggccttctttagtcacaccctcaggttcagtcc
tctggaggagttgttgtttgccctgcttttgggctgttcaggtccatgtg
aaagtcccatgtggttctcatcgccaggaaggccagaggtacctgtctgc
cagaaaggaagcagagtttggaaaagggagatggaatgcatgccccatgg
gtggaacttcccctaccgttacagtaacaggctgtgtgcacccagacagg
aggcataggaattcagaagtgtgtgcatgctaaaggaatggagggtcccc
tggagtccccagtttcctcggctctgagaggtgtgctgtcagaagtgcat
gctctaacagtagacatggaagcagtcagaatggcgggtcagtcagtggt
ctccagcattgctcctgtgtcttccccgcgctggacctcagaaatccctg
tccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28823797_28824925
seq2: B6Ng01-196F24.b_43_1170

seq1  GAATTCCTTTAAAAAAAAAAAAGAAGGAAATTTCCCTCAGCAGGATAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAAAAAAAAAAAAGAAGGAAATTTCCCTCAGCAGGATAGAC  50

seq1  ATGTGAACCAATAAACCAACACCATGTTGTGACCAGCAACCTGAACTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAACCAATAAACCAACACCATGTTGTGACCAGCAACCTGAACTGCA  100

seq1  CCAGAAAGTGTTACAAAAGTCAATCTGGGGAAATCTCCAATCAGTGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGTGTTACAAAAGTCAATCTGGGGAAATCTCCAATCAGTGACAT  150

seq1  GGAAGGATCTGTCCATGTGCACAGGTGATGTGCACAGGTGATATGGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGATCTGTCCATGTGCACAGGTGATGTGCACAGGTGATATGGAAGT  200

seq1  GAGTGGGAGGCTTGTGCTAGCCCCCATGGCTCCTCCTTGGTACTCAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGAGGCTTGTGCTAGCCCCCATGGCTCCTCCTTGGTACTCAGGCC  250

seq1  CCCACCCAAAGCACAATTAGCCATGTAACTCCACTATTGTCTGTTTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCAAAGCACAATTAGCCATGTAACTCCACTATTGTCTGTTTAATG  300

seq1  ATCTGCAAAGTGACTTCAGAAATATTTTCACTTTTAAAGTGTCTCGACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCAAAGTGACTTCAGAAATATTTTCACTTTTAAAGTGTCTCGACTC  350

seq1  ATGTGGCCCCGCTAACTCTCAAACCAACTTTTACCTGCATCTGTAGACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCCCCGCTAACTCTCAAACCAACTTTTACCTGCATCTGTAGACCA  400

seq1  TCCACTTCAGAAGAGAAAGGCAGAGGGCAGAGGGCAGAGGAATATCTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCAGAAGAGAAAGGCAGAGGGCAGAGGGCAGAGGAATATCTACT  450

seq1  CTTGATATAAGTGAGACCTAGGACCATGAAAGAGCTAAGAGCCTGCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATATAAGTGAGACCTAGGACCATGAAAGAGCTAAGAGCCTGCTGAA  500

seq1  TAATAACCTGTGAATGTCTTTTTTTAAAAAATCAGACACATGTAATTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACCTGTGAATGTCTTTTTTTAAAAAATCAGACACATGTAATTTTG  550

seq1  AAATTATAGCTCCAGCCTTAAGGCACTTTATCTTTTATTGGAAGCACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAGCTCCAGCCTTAAGGCACTTTATCTTTTATTGGAAGCACAAG  600

seq1  TTATGTAAAGCGATTTTCTGGGCTGAAGACAGACTGTTAAGAACTCAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAAAGCGATTTTCTGGGCTGAAGACAGACTGTTAAGAACTCAATG  650

seq1  GGATATGTATAAGGGAAAGGTATTAAAGCTACACTCCATTCACACACCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGTATAAGGGAAAGGTATTAAAGCTACACTCCATTCACACACCCT  700

seq1  TGACCTCAGAGCGTCTTCGGTTTGTGGCCTGGAATCTTGGAGATTAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCAGAGCGTCTTCGGTTTGTGGCCTGGAATCTTGGAGATTAAACA  750

seq1  ATGGGTGTTAAAATTACCAACACCCGGAGGTCTTTGCACATTTCTGTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGTTAAAATTACCAACACCCGGAGGTCTTTGCACATTTCTGTATG  800

seq1  AAATATACATACTGTGTTCTCTACTATGAT-GGGGTGTGGCAAATGGGGG  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAATATACATACTGTGTTCTCTACTATGATGGGGGTGTGGCAAATGGGGG  850

seq1  CAGGGGCAATCAAAATTAATGCGCTAAAGCTTTATTATTCATGTAATGAA  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAGGGGCAATCAAAATTATTGCGCTAAAGCTTTATTATTCATGTAATGAA  900

seq1  ATTTTGGCTGAAAGTAAAGCA-TTTAAAATACAAT-GTGGCTAACTGTAT  947
      ||||||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  ATTTTGGCTGAAAGTAAAGCATTTTAAAATACAATGGTGGCTAACTGTAT  950

seq1  TTGAGATGTTGTTTCTGAGTATATTCT-GGCAGTTGACCTGACCTCAGAG  996
      ||||||||||||| ||||||||||||| ||||||||||||||||||||||
seq2  TTGAGATGTTGTTCCTGAGTATATTCTGGGCAGTTGACCTGACCTCAGAG  1000

seq1  CAATGACTTCTGAAATATAATCGCCCACATTAACAG-TATACCTGACTTG  1045
      || ||||||||| |||||||||||||||||  |||| ||||| |||||||
seq2  CATTGACTTCTGGAATATAATCGCCCACAT--ACAGTTATACTTGACTTG  1048

seq1  ATTTTAATATATACAATATATCAAAATGGTCAGA-GTGGAATCATCCTGT  1094
      | ||||||||||||||||||||||  |||||||| |||||||||| ||||
seq2  A-TTTAATATATACAATATATCAATCTGGTCAGAGGTGGAATCAT-CTGT  1096

seq1  ATCAGCTGTAAATACAAGGATACAAAGTTATGAAT  1129
      ||||||||||| ||| |||||||||   |||||||
seq2  ATCAGCTGTAATTAC-AGGATACAA--GTATGAAT  1128

seq1: chr16_28867106_28867707
seq2: B6Ng01-196F24.g_64_667 (reverse)

seq1  GGGACAGGGA-TTCTGAGGTCCAGCGCGGGGAAGACACA-GAGCAATGCT  48
      |||||||||| |||||||||||||||||||||||||||| ||||||||||
seq2  GGGACAGGGATTTCTGAGGTCCAGCGCGGGGAAGACACAGGAGCAATGCT  50

seq1  GGAGACCACTGACTGACCCGCCATTCTGACTGCTTCCATGTCTACTGTTA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCACTGACTGACCCGCCATTCTGACTGCTTCCATGTCTACTGTTA  100

seq1  GAGCATGCACTTCTGACAGCACACCTCTCAGAGCCGAGGAAACTGGGGAC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGCACTTCTGACAGCACACCTCTCAGAGCCGAGGAAACTGGGGAC  150

seq1  TCCAGGGGACCCTCCATTCCTTTAGCATGCACACACTTCTGAATTCCTAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGGACCCTCCATTCCTTTAGCATGCACACACTTCTGAATTCCTAT  200

seq1  GCCTCCTGTCTGGGTGCACACAGCCTGTTACTGTAACGGTAGGGGAAGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTGTCTGGGTGCACACAGCCTGTTACTGTAACGGTAGGGGAAGTT  250

seq1  CCACCCATGGGGCATGCATTCCATCTCCCTTTTCCAAACTCTGCTTCCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCATGGGGCATGCATTCCATCTCCCTTTTCCAAACTCTGCTTCCTT  300

seq1  TCTGGCAGACAGGTACCTCTGGCCTTCCTGGCGATGAGAACCACATGGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGACAGGTACCTCTGGCCTTCCTGGCGATGAGAACCACATGGGA  350

seq1  CTTTCACATGGACCTGAACAGCCCAAAAGCAGGGCAAACAACAACTCCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACATGGACCTGAACAGCCCAAAAGCAGGGCAAACAACAACTCCTC  400

seq1  CAGAGGACTGAACCTGAGGGTGTGACTAAAGAAGGCCCTGAAAACAAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACTGAACCTGAGGGTGTGACTAAAGAAGGCCCTGAAAACAAATA  450

seq1  TGGAAGTTTCTAGAAATATTTTGTGCACGCAGATACATCTATACAAAGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTTTCTAGAAATATTTTGTGCACGCAGATACATCTATACAAAGAT  500

seq1  ATCTGAACATTAGTCATATAGATACAGGCACAGATACACACACACACACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAACATTAGTCATATAGATACAGGCACAGATACACACACACACACA  550

seq1  CACACACACACACACACACACACACACACACACATTTCTAGTGTTATAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACATTTCTAGTGTTATAGA  600

seq1  ATTC  602
      ||||
seq2  ATTC  604