BAC Information

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BAC

Clone NameB6Ng01-196K08
Chromosome16 (Build37)
Map Location 57,887,352 - 58,035,867
singlet/doubletdoublet
Overlap geneLOC629342, LOC100043477
Upstream geneLOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196K08.bB6Ng01-196K08.g
ACCGA018732GA018733
length1,1171,116
definitionB6Ng01-196K08.b B6Ng01-196K08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,887,352 - 57,888,469)(58,034,768 - 58,035,867)
sequence
gaattccaacaataatatcaattgttgtaacaaaaaggccaagcaagtta
cttctcaacagcattaaagaggtagtcacatttttttttttcttttgaag
gagatacacaggcctagatagaaataacagtgagctttttgatgaccgcg
caagctactcaaacagcctggcttacatgaggaaccctagtctctggagt
catggaattggtttaacaataattcactgagtaatgttgcacagaggccc
aacgtaaagcctgctgtccctgtgctatctccatactgttggggacagaa
gagcccaacttcttggtggttagtcacttgaggtcctgcttgatgttcac
cctcatcctctctagctacagataactaacttgttatattccagtcacag
tgtaaaggaagtgtttagcaatgtctacgaggaagaatgttcattatcca
atggacagatgatggccatctctgccacaggtataggcaattgccaacca
cggatgggagtgatgcacgaggtatcatggattagtgatgtcagtatggg
cattagaacaagggagtcatggtgtgcctattctcaactgtccttcccct
ctctgtgatgtacatatactactctgtgaacgactccctgggcttcctta
agataatcagatttttttttcctgaaactggcactagtggtagttccagg
ccacagagggtgggaagcaccacttaggatttgttcctcaacctctgtta
taggtgcagtcagtgactgtttctaatgtagtagtctatctgttctttca
gagccccaactcccactgtctgagactgagaaactgactgccaatttcta
ccttctttctagtgacgactcatccctttttctatccagctctggggaat
cacacacgtctcttccagttaggtcccacagttggctgcttcccttctgg
tgactgttttttgggcaggaatatcccattgtaaatgttctctgtggcat
tactaggtacagccactgtattctttttctgtgctgttagggcatgaagt
tctgatgggtgtgagtcatgtcttatgtttgacttgatgagccaggcatt
tgtgcagcatgcaaacc
gaattctaatcagagtagtgcatgatattttccctctggacatttgcttt
aatagaaaaaggaaataacattatacactgcacatatggaacacagattt
tgatcccaaccaccatacatgagaaacatgtgttcctaaaagaatgaata
ataaccaggtacttttgcagatggtaaggtagaactgatggacctttgcc
atatacaaaggtttaacctcaggggtaaaatttggaaccataagatcaat
ttctcaaagcctaatgtgttttaaaattatgttcagcctttgtaatgatt
ttttaggcattttactaaaatcaaccatcatttttggaattacccccaca
aatatttattgaccctttgttgaagtgctatgcactggtcatctagctcc
ctctaggttataaaacaagagcaaataactcagggtgcacctggtataac
attgtgtagggtaagaattagaaagctgaaaatggcagaagtatctgcaa
accaggtgctctttaaacatgcaattagaggatgctctctagtctgtagt
ttacactgccaaccagcagtgtatggagactttcctttccctacatctat
ggcagccttttctgccctttatattcttgatgatggcccttccaactgtg
tgaaacagggatgagaccaagacgtggaagaagggatgagtagggagcta
gccaaaccaaggatgcatgaggaaacgctaggaacctctactagtctgca
agttcttaaaatataatatataaaaaaagaatttgaacagaagtatcttg
gatggataaataatgctgctccaagaaaaaaaaaatgggttcttaagtga
aaatctcatctccaggaattggttacttttgatttaataattggtcagag
aagccccagaaacacccaaaacaatataggttgttacctccactcatcat
tgctcacaataactcgattgtaagacccggattgttgaaatgctacaaaa
ctttcaaactacaaattcctttttgttgtagcttttcatagcaccaaaag
aatgttcttgttacattggttggggggaagagaagaacatttttatactt
tggccctggcatctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57887352_57888469
seq2: B6Ng01-196K08.b_44_1160

seq1  GAATTCCAACAATAATATCAATTGTTGTAACAAAAAGGCCAAGCAAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACAATAATATCAATTGTTGTAACAAAAAGGCCAAGCAAGTTA  50

seq1  CTTCTCAACAGCATTAAAGAGGTAGTCACATTTTTTTTTTTCTTTTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAACAGCATTAAAGAGGTAGTCACATTTTTTTTTTTCTTTTGAAG  100

seq1  GAGATACACAGGCCTAGATAGAAATAACAGTGAGCTTTTTGATGACCGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACACAGGCCTAGATAGAAATAACAGTGAGCTTTTTGATGACCGCG  150

seq1  CAAGCTACTCAAACAGCCTGGCTTACATGAGGAACCCTAGTCTCTGGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTACTCAAACAGCCTGGCTTACATGAGGAACCCTAGTCTCTGGAGT  200

seq1  CATGGAATTGGTTTAACAATAATTCACTGAGTAATGTTGCACAGAGGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAATTGGTTTAACAATAATTCACTGAGTAATGTTGCACAGAGGCCC  250

seq1  AACGTAAAGCCTGCTGTCCCTGTGCTATCTCCATACTGTTGGGGACAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTAAAGCCTGCTGTCCCTGTGCTATCTCCATACTGTTGGGGACAGAA  300

seq1  GAGCCCAACTTCTTGGTGGTTAGTCACTTGAGGTCCTGCTTGATGTTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCAACTTCTTGGTGGTTAGTCACTTGAGGTCCTGCTTGATGTTCAC  350

seq1  CCTCATCCTCTCTAGCTACAGATAACTAACTTGTTATATTCCAGTCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCCTCTCTAGCTACAGATAACTAACTTGTTATATTCCAGTCACAG  400

seq1  TGTAAAGGAAGTGTTTAGCAATGTCTACGAGGAAGAATGTTCATTATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGGAAGTGTTTAGCAATGTCTACGAGGAAGAATGTTCATTATCCA  450

seq1  ATGGACAGATGATGGCCATCTCTGCCACAGGTATAGGCAATTGCCAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAGATGATGGCCATCTCTGCCACAGGTATAGGCAATTGCCAACCA  500

seq1  CGGATGGGAGTGATGCACGAGGTATCATGGATTAGTGATGTCAGTATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATGGGAGTGATGCACGAGGTATCATGGATTAGTGATGTCAGTATGGG  550

seq1  CATTAGAACAAGGGAGTCATGGTGTGCCTATTCTCAACTGTCCTTCCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAACAAGGGAGTCATGGTGTGCCTATTCTCAACTGTCCTTCCCCT  600

seq1  CTCTGTGATGTACATATACTACTCTGTGAACGACTCCCTGGGCTTCCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGATGTACATATACTACTCTGTGAACGACTCCCTGGGCTTCCTTA  650

seq1  AGATAATCAGATTTTTTTTTCCTGAAACTGGCACTAGTGGTAGTTCCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATCAGATTTTTTTTTCCTGAAACTGGCACTAGTGGTAGTTCCAGG  700

seq1  CCACAGAGGGTGGGAAGCACCACTTAGGATTTGTTCCTCAACCTCTGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAGGGTGGGAAGCACCACTTAGGATTTGTTCCTCAACCTCTGTTA  750

seq1  TAGGTGCAGTCAGTGACTGTTTCTAATGTAGTAGTCTATCTGTTCTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCAGTCAGTGACTGTTTCTAATGTAGTAGTCTATCTGTTCTTTCA  800

seq1  GAGCCCCAACTCCCACTGTCTGAGACTGAGAAACTGACTGCCAATTTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCAACTCCCACTGTCTGAGACTGAGAAACTGACTGCCAATTTCTA  850

seq1  CCTTCTTTCTAGTGACGACTCATCCCTTTTTCTATCCAGCTCTGGGGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTTCTAGTGACGACTCATCCCTTTTTCTATCCAGCTCTGGGGAAT  900

seq1  CACACACGTCTCTTCCAGTTAGGTCCCACAGTTGGCTGCTTCCCTTCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACGTCTCTTCCAGTTAGGTCCCACAGTTGGCTGCTTCCCTTCTGG  950

seq1  TGACTG-TTTTTGGGCAGGAATATCCCATTGTAAATGTTCTCTGTGGCAT  999
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTTTTTGGGCAGGAATATCCCATTGTAAATGTTCTCTGTGGCAT  1000

seq1  TACTAGGTACAGCCACTGTATTCTTTTTCTGTGCTGTTTAGGGCATGGAG  1049
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  TACTAGGTACAGCCACTGTATTCTTTTTCTGTGCTG-TTAGGGCATGAAG  1049

seq1  -TCTGATGGGTGTGAGTTAATGTC-TATGTTTGACTTTGATGAGCAAGGC  1097
       ||||||||||||||| | ||||| |||||||||| ||||||||| ||||
seq2  TTCTGATGGGTGTGAG-TCATGTCTTATGTTTGAC-TTGATGAGCCAGGC  1097

seq1  ATTTGTGCAAGCATGCAAACC  1118
      |||||||| ||||||||||||
seq2  ATTTGTGC-AGCATGCAAACC  1117

seq1: chr16_58034768_58035867
seq2: B6Ng01-196K08.g_67_1182 (reverse)

seq1  GTAGATGC--AGGCCCAAGTAT--AAATG-TCTTCTC-TCCCCCCAA-CA  43
      ||||||||   |||| ||||||  ||||| ||||||| ||||||||| ||
seq2  GTAGATGCCAGGGCCAAAGTATAAAAATGTTCTTCTCTTCCCCCCAACCA  50

seq1  ATGTA--CAGAACA-TCCTTTGGTGCTATG-AAAGCTACA--CAAAAGGA  87
      |||||   |||||| || |||||||||||| |||||||||   |||||||
seq2  ATGTAACAAGAACATTCTTTTGGTGCTATGAAAAGCTACAACAAAAAGGA  100

seq1  ATTTGTAGTTTGAA--GTTTGTAGCATTTCAACAAT-CGGGTCTTACAAT  134
      ||||||||||||||   ||||||||||||||||||| |||||||||||||
seq2  ATTTGTAGTTTGAAAGTTTTGTAGCATTTCAACAATCCGGGTCTTACAAT  150

seq1  CGAGTTATTGTGAGCAATGATGAGTGGAGGTAACAACCTATATTGTTTTG  184
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTTATTGTGAGCAATGATGAGTGGAGGTAACAACCTATATTGTTTTG  200

seq1  GGTGTTTCTGGGGCTTCTCTGACCAATTATTAAATCAAAAGTAACCAATT  234
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTCTGGGGCTTCTCTGACCAATTATTAAATCAAAAGTAACCAATT  250

seq1  CCTGGAGATGAGATTTTCACTTAAGAACCCATTTTTTTTTTCTTGGAGCA  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGATGAGATTTTCACTTAAGAACCCATTTTTTTTTTCTTGGAGCA  300

seq1  GCATTATTTATCCATCCAAGATACTTCTGTTCAAATTCTTTTTTTATATA  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATTTATCCATCCAAGATACTTCTGTTCAAATTCTTTTTTTATATA  350

seq1  TTATATTTTAAGAACTTGCAGACTAGTAGAGGTTCCTAGCGTTTCCTCAT  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTAAGAACTTGCAGACTAGTAGAGGTTCCTAGCGTTTCCTCAT  400

seq1  GCATCCTTGGTTTGGCTAGCTCCCTACTCATCCCTTCTTCCACGTCTTGG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTTGGTTTGGCTAGCTCCCTACTCATCCCTTCTTCCACGTCTTGG  450

seq1  TCTCATCCCTGTTTCACACAGTTGGAAGGGCCATCATCAAGAATATAAAG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCCCTGTTTCACACAGTTGGAAGGGCCATCATCAAGAATATAAAG  500

seq1  GGCAGAAAAGGCTGCCATAGATGTAGGGAAAGGAAAGTCTCCATACACTG  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAAAGGCTGCCATAGATGTAGGGAAAGGAAAGTCTCCATACACTG  550

seq1  CTGGTTGGCAGTGTAAACTACAGACTAGAGAGCATCCTCTAATTGCATGT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTGGCAGTGTAAACTACAGACTAGAGAGCATCCTCTAATTGCATGT  600

seq1  TTAAAGAGCACCTGGTTTGCAGATACTTCTGCCATTTTCAGCTTTCTAAT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGCACCTGGTTTGCAGATACTTCTGCCATTTTCAGCTTTCTAAT  650

seq1  TCTTACCCTACACAATGTTATACCAGGTGCACCCTGAGTTATTTGCTCTT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCCTACACAATGTTATACCAGGTGCACCCTGAGTTATTTGCTCTT  700

seq1  GTTTTATAACCTAGAGGGAGCTAGATGACCAGTGCATAGCACTTCAACAA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATAACCTAGAGGGAGCTAGATGACCAGTGCATAGCACTTCAACAA  750

seq1  AGGGTCAATAAATATTTGTGGGGGTAATTCCAAAAATGATGGTTGATTTT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCAATAAATATTTGTGGGGGTAATTCCAAAAATGATGGTTGATTTT  800

seq1  AGTAAAATGCCTAAAAAATCATTACAAAGGCTGAACATAATTTTAAAACA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATGCCTAAAAAATCATTACAAAGGCTGAACATAATTTTAAAACA  850

seq1  CATTAGGCTTTGAGAAATTGATCTTATGGTTCCAAATTTTACCCCTGAGG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGCTTTGAGAAATTGATCTTATGGTTCCAAATTTTACCCCTGAGG  900

seq1  TTAAACCTTTGTATATGGCAAAGGTCCATCAGTTCTACCTTACCATCTGC  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCTTTGTATATGGCAAAGGTCCATCAGTTCTACCTTACCATCTGC  950

seq1  AAAAGTACCTGGTTATTATTCATTCTTTTAGGAACACATGTTTCTCATGT  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTACCTGGTTATTATTCATTCTTTTAGGAACACATGTTTCTCATGT  1000

seq1  ATGGTGGTTGGGATCAAAATCTGTGTTCCATATGTGCAGTGTATAATGTT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGTTGGGATCAAAATCTGTGTTCCATATGTGCAGTGTATAATGTT  1050

seq1  ATTTCCTTTTTCTATTAAAGCAAATGTCCAGAGGGAAAATATCATGCACT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTTTTCTATTAAAGCAAATGTCCAGAGGGAAAATATCATGCACT  1100

seq1  ACTCTGATTAGAATTC  1100
      ||||||||||||||||
seq2  ACTCTGATTAGAATTC  1116