BAC Information

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BAC

Clone NameB6Ng01-198I13
Chromosome16 (Build37)
Map Location 63,249,357 - 63,250,436
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
Downstream geneEpha3, LOC100043540
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198I13.bB6Ng01-198I13.g
ACCGA020104GA020105
length1,073104
definitionB6Ng01-198I13.b B6Ng01-198I13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctagaatgttttttctctcacctggttcttggcagaactca
agttctaaaagttgccaggcaaggcccctgttccgtcactctctgtaatc
tcatggctgtgaaaagctcttagaggccacccacatttattgctacattt
tttcctcagatgccctttcacaagacacccatcacatattatgtttcatc
cattcattcattcattcattcattcattctgtctgtctgtctgtctgcct
gcctgcctatttattctctcatctattacacccggacctcagttccccct
ccatcctctcattctctttccccatccttccttctcttcccagtctacta
ctcctccattttttcttcagaagaggcatgccttccagggatattatcca
aaaatgacatatcaggttgtggtaagactaggtatctcccctcatattaa
ggctagaaggggcagcccaactagaagaaaaggtagcatatgcaggcatg
tgccacagacagcacacttcacccttgtgaaggccaatggaatagagtaa
ctcagaatccaacacttaattattggaataataaatccatctctttgatt
aaccacaaggaggaggtgtctatttagcatgttctacaagtaaggaggga
ctctgggggaaatggatgcagtgggaagtgtgtgtcactaggaattgtgt
aagctgcttctgaagatgaagaacggacaacaggagacccagcagacata
ttaaataatgaggaacttcagttcattggcctttcaacgcatatataatc
aattcacaaaaatatgaatctggtcattaatagtattttgaagtcatata
tgaggagaatgactcacagagagacagataggaagggatggaaagaggaa
tgaaggaggaggaagagatagatgatagatagagagactattgacatcga
atggctacatagaaggatgatccatataactacatacatttattagtgaa
gacagcgacttttttctaaaaaataattgattattattaatttaattttt
tacccttcagattttgccccctc

aagattaagtgaccagcaaatcttttgtcaggcgaagatcagttgcctca
tttaaaaatagcttttctttatgagagagggagagggagagggagaggga
gagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_63249357_63250436
seq2: B6Ng01-198I13.b_46_1118

seq1  GAATTCTTTCTAGAATGTTTTTTCTCTCACCTGGTTCTTGGCAGAACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTAGAATGTTTTTTCTCTCACCTGGTTCTTGGCAGAACTCA  50

seq1  AGTTCTAAAAGTTGCCAGGCAAGGCCCCTGTTCCGTCACTCTCTGTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAAAAGTTGCCAGGCAAGGCCCCTGTTCCGTCACTCTCTGTAATC  100

seq1  TCATGGCTGTGAAAAGCTCTTAGAGGCCACCCACATTTATTGCTACATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCTGTGAAAAGCTCTTAGAGGCCACCCACATTTATTGCTACATTT  150

seq1  TTTCCTCAGATGCCCTTTCACAAGACACCCATCACATATTATGTTTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCAGATGCCCTTTCACAAGACACCCATCACATATTATGTTTCATC  200

seq1  CATTCATTCATTCATTCATTCATTCATTCTGTCTGTCTGTCTGTCTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTCATTCATTCATTCATTCATTCTGTCTGTCTGTCTGTCTGCCT  250

seq1  GCCTGCCTATTTATTCTCTCATCTATTACACCCGGACCTCAGTTCCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTATTTATTCTCTCATCTATTACACCCGGACCTCAGTTCCCCCT  300

seq1  CCATCCTCTCATTCTCTTTCCCCATCCTTCCTTCTCTTCCCAGTCTACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTCTCATTCTCTTTCCCCATCCTTCCTTCTCTTCCCAGTCTACTA  350

seq1  CTCCTCCATTTTTTCTTCAGAAGAGGCATGCCTTCCAGGGATATTATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCATTTTTTCTTCAGAAGAGGCATGCCTTCCAGGGATATTATCCA  400

seq1  AAAATGACATATCAGGTTGTGGTAAGACTAGGTATCTCCCCTCATATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACATATCAGGTTGTGGTAAGACTAGGTATCTCCCCTCATATTAA  450

seq1  GGCTAGAAGGGGCAGCCCAACTAGAAGAAAAGGTAGCATATGCAGGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGAAGGGGCAGCCCAACTAGAAGAAAAGGTAGCATATGCAGGCATG  500

seq1  TGCCACAGACAGCACACTTCACCCTTGTGAAGGCCAATGGAATAGAGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGACAGCACACTTCACCCTTGTGAAGGCCAATGGAATAGAGTAA  550

seq1  CTCAGAATCCAACACTTAATTATTGGAATAATAAATCCATCTCTTTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAATCCAACACTTAATTATTGGAATAATAAATCCATCTCTTTGATT  600

seq1  AACCACAAGGAGGAGGTGTCTATTTAGCATGTTCTACAAGTAAGGAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAAGGAGGAGGTGTCTATTTAGCATGTTCTACAAGTAAGGAGGGA  650

seq1  CTCTGGGGGAAATGGATGCAGTGGGAAGTGTGTGTCACTAGGAATTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGGGAAATGGATGCAGTGGGAAGTGTGTGTCACTAGGAATTGTGT  700

seq1  AAGCTGCTTCTGAAGATGAAGAACGGACAACAGGAGACCCAGCAGACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCTTCTGAAGATGAAGAACGGACAACAGGAGACCCAGCAGACATA  750

seq1  TTAAATAATGAGGAACTTCAGTTCATTGGCCTTTCAACGCATATATAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAATGAGGAACTTCAGTTCATTGGCCTTTCAACGCATATATAATC  800

seq1  AATTCACAAAAATATGAATCTGGTCATTAATAGTATTTTGAAGTCATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACAAAAATATGAATCTGGTCATTAATAGTATTTTGAAGTCATATA  850

seq1  TGAGGAGAATGACTCACAGAGAGACAGATAGGAAGGGATGGAAAGAGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGAATGACTCACAGAGAGACAGATAGGAAGGGATGGAAAGAGGAA  900

seq1  TGAAGGGAGGAGGAAGAGATAGATGATAGATAGAGAGACAAATAGACAAA  950
      |||| ||||||||||||||||||||||||||||||||||  || |||  |
seq2  TGAA-GGAGGAGGAAGAGATAGATGATAGATAGAGAGAC-TATTGAC--A  946

seq1  TAGAATGG-TACAATAGAAGAATGA-CCATAATAACTACAATACATTTAT  998
      | |||||| ||| ||||||| |||| |||| |||||||| ||||||||||
seq2  TCGAATGGCTAC-ATAGAAGGATGATCCAT-ATAACTAC-ATACATTTAT  993

seq1  TAGTGAAAGACAGCGACTTTTTCTAAAAAAATAATCTATTATTAATTAAT  1048
      ||||| ||||||||||||||||   ||||||||||  |||||| ||||||
seq2  TAGTG-AAGACAGCGACTTTTTTCTAAAAAATAATTGATTATT-ATTAAT  1041

seq1  TTAATTTTTTACACTCCAGATTTTGCCCCCTC  1080
      |||||||||||| || ||||||||||||||||
seq2  TTAATTTTTTACCCTTCAGATTTTGCCCCCTC  1073


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