BAC Information

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BAC

Clone NameB6Ng01-199L18
Chromosome16 (Build37)
Map Location 28,901,154 - 28,902,205
singlet/doubletsinglet
Overlap gene1600021P15Rik
Upstream geneFgf12
Downstream geneEG666717, Hrasls, Atp13a5, Atp13a4, Opa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199L18.bB6Ng01-199L18.g
ACCGA020991GA020992
length1,0651,212
definitionB6Ng01-199L18.b B6Ng01-199L18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaagatggcctcaggtcacttcagagctgggtttggtattcac
tgtcaaggatagaaatcctcctgcacacctcaaaagaagggagcctgcaa
gtggtccctcgagatgtcctcagaagactctatctctgcaacagtaggct
cagtgactaaacgtccagtcccagaaagcttctgggaacaactacaaggg
tccctttgtctggatgctagcttgcagctccaaagttacaggattcctaa
gcagtcccctgactggagaaaagtcagtcccacctggcttcctccatcct
cttcagaagcgccttgctgtaagaacaggagcctcctgtgtggttgtcaa
agaactatctgtattccaggcaaccgtgaatggagatgaatataactaca
acacgcttggtctgcttctggacatctgagactcactatgatagcaaagg
accttgacaggacctgatgccacttaagggtcacaaagacaaagcttcac
acatgaaagccaggtacaaagtccttcgggctttggaactatatacttgg
gatagtcccttggttttcaaagtcagagtacactgcccatgtataccatt
aaaactgtgtatcaagactgagaacggtggcccctgcccatggtcccagg
tattcagaagactgggggagaagagtggcctggtcccaggagatcctaaa
cagacccgatgaaagaacgaaataaaatggaaaatcaaccaaagcccgca
ttactacattttactgcaattcagttagtgatttattttctaggcagtca
attctgggtcagatgctcggtagctctcctgcctttgtactatccctcgc
ttcttcatcactgcacactgctgtacagttccagtgaactatgacagtcc
tggcagattggagatgtaaacagatagatacatgagttggtttactcttg
tccatgaaagcatcaaattatttcagagacctgaatgaagacttttgtct
cactgtgtgtgtgtgttgtgcgttgtgttatgtgcatatgtctgggtgtt
tagtggtgtatatgt
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacacaagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgtggatgtggagaaagaggaacactcctccattgttggtgg
gagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaactggacatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacctagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
aaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggatacccaagatataagatataatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagattttgggaa
caaaacacccatggaaggagtttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccatttgcatacactagcaagattttattgg
aaaggacccagatgtagcttgtctctggtgagacttatgccggggcctag
caaaacatcagaagtggatgcttcacagttcagcttaattggatggatca
atagggcttcctaattggaggagctagagaaagtagcccaagtagcttaa
aggggattcttgccatccctattaagttggaactaacatttattgaatct
aaccagtactcgggagctctttggactctaagcctgtctattatatcaaa
agattggcctagtcgtcattcacttgtaagagatgagtcctattggaact
tggctacctttaaatgcccaattacctgtggcaacatcctatggtcctca
atatatactgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28901154_28902205
seq2: B6Ng01-199L18.b_37_1101

seq1  GAATTCAAAAGATGGCCTCAGGTCACTTCAGAGCTGGGTTTGGTATTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGATGGCCTCAGGTCACTTCAGAGCTGGGTTTGGTATTCAC  50

seq1  TGTCAAGGATAGAAATCCTCCTGCACACCTCAAAAGAAGGGAGCCTGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGGATAGAAATCCTCCTGCACACCTCAAAAGAAGGGAGCCTGCAA  100

seq1  GTGGTCCCTCGAGATGTCCTCAGAAGACTCTATCTCTGCAACAGTAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCCCTCGAGATGTCCTCAGAAGACTCTATCTCTGCAACAGTAGGCT  150

seq1  CAGTGACTAAACGTCCAGTCCCAGAAAGCTTCTGGGAACAACTACAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACTAAACGTCCAGTCCCAGAAAGCTTCTGGGAACAACTACAAGGG  200

seq1  TCCCTTTGTCTGGATGCTAGCTTGCAGCTCCAAAGTTACAGGATTCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTGTCTGGATGCTAGCTTGCAGCTCCAAAGTTACAGGATTCCTAA  250

seq1  GCAGTCCCCTGACTGGAGAAAAGTCAGTCCCACCTGGCTTCCTCCATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCCCTGACTGGAGAAAAGTCAGTCCCACCTGGCTTCCTCCATCCT  300

seq1  CTTCAGAAGCGCCTTGCTGTAAGAACAGGAGCCTCCTGTGTGGTTGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAAGCGCCTTGCTGTAAGAACAGGAGCCTCCTGTGTGGTTGTCAA  350

seq1  AGAACTATCTGTATTCCAGGCAACCGTGAATGGAGATGAATATAACTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATCTGTATTCCAGGCAACCGTGAATGGAGATGAATATAACTACA  400

seq1  ACACGCTTGGTCTGCTTCTGGACATCTGAGACTCACTATGATAGCAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCTTGGTCTGCTTCTGGACATCTGAGACTCACTATGATAGCAAAGG  450

seq1  ACCTTGACAGGACCTGATGCCACTTAAGGGTCACAAAGACAAAGCTTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGACAGGACCTGATGCCACTTAAGGGTCACAAAGACAAAGCTTCAC  500

seq1  ACATGAAAGCCAGGTACAAAGTCCTTCGGGCTTTGGAACTATATACTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAAGCCAGGTACAAAGTCCTTCGGGCTTTGGAACTATATACTTGG  550

seq1  GATAGTCCCTTGGTTTTCAAAGTCAGAGTACACTGCCCATGTATACCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTCCCTTGGTTTTCAAAGTCAGAGTACACTGCCCATGTATACCATT  600

seq1  AAAACTGTGTATCAAGACTGAGAACGGTGGCCCCTGCCCATGGTCCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTGTATCAAGACTGAGAACGGTGGCCCCTGCCCATGGTCCCAGG  650

seq1  TATTCAGAAGACTGGGGGAGAAGAGTGGCCTGGTCCCAGGAGATCCTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGAAGACTGGGGGAGAAGAGTGGCCTGGTCCCAGGAGATCCTAAA  700

seq1  CAGACCCGATGAAAGAACGAAATAAAATGGAAAATCAACCAAAGCCCGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCGATGAAAGAACGAAATAAAATGGAAAATCAACCAAAGCCCGCA  750

seq1  TTACTACATTTTACTGCAATTCAGTTAGTGA-TTATTTTCTAGGCAGTCA  799
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTACTACATTTTACTGCAATTCAGTTAGTGATTTATTTTCTAGGCAGTCA  800

seq1  ATTCTGGGTCAGATGCTCGGTAGCTCTCCTGCCTTTGTACTATCCCTCGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGGTCAGATGCTCGGTAGCTCTCCTGCCTTTGTACTATCCCTCGC  850

seq1  TTCTTCATCACTGCACACTGCTGTACAGTTCCAGTGAACTATGACAGT-C  898
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCTTCATCACTGCACACTGCTGTACAGTTCCAGTGAACTATGACAGTCC  900

seq1  TGGCAGA-TGGAGATGTAAACAGATAGATACATGAGTTGG-TTACTC-TG  945
      ||||||| |||||||||||||||||||||||||||||||| |||||| ||
seq2  TGGCAGATTGGAGATGTAAACAGATAGATACATGAGTTGGTTTACTCTTG  950

seq1  TCCATGAAAGCATCAAA-TAATTCAGAGA-CTGAATGAAGAC-TTTGTCT  992
      ||||||||||||||||| || |||||||| |||||||||||| |||||||
seq2  TCCATGAAAGCATCAAATTATTTCAGAGACCTGAATGAAGACTTTTGTCT  1000

seq1  CACTGTGTGTGTGTG-TGTGTG-TGTG-TGTGTGCATATGTCTGTGTGTT  1039
      ||||||||||||||| |||| | |||| | |||||||||||||| |||||
seq2  CACTGTGTGTGTGTGTTGTGCGTTGTGTTATGTGCATATGTCTGGGTGTT  1050

seq1  T-GT-GTGTATATGT  1052
      | || ||||||||||
seq2  TAGTGGTGTATATGT  1065