BAC Information

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BAC

Clone NameB6Ng01-201I17
Chromosome16 (Build37)
Map Location 27,944,502 - 27,945,057
singlet/doubletsinglet
Overlap genenone
Upstream geneGm606, Ostn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201I17.g
ACCGA022288
length1,149
definitionB6Ng01-201I17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactgaagcatttggacttctttaagaaaaatatttctttttttt
tttttttattcactatatgtgggactttatttgctgaggttttttttctt
tttttgtcccacttttttcatttaaggatttacttcatttatatttcaaa
tgctattactcaaagacccctatgttgcccccctcccccactcccctgcc
cacccattcctacatcttggccctggggtttcccctgtgaggggaaggct
tcatcgtgagatgcatgggcggctctttgcaatgatggccatttatgcca
tcttctgctacatatgagtgaaaagaaacaagctgagagacaactggtta
ggatccacttagttccacctaaaaggctgaagacccctttctatccccgg
gtatgttcacagctccctccatagggggaccagaagaaacataaatcaat
gactttgagtgacttattcaaaggactccaccatctgccccttccttaca
cagaaaccctataccacggtcctttcacaaaaaatcttgctaaagagagc
atcgtatttccgcttagggggcaaattatgcagggtggtcaactttcttt
tttttttttttttttttgtttttgtttttgtttttgtttttgtttttttg
agacagggtttctctgtatagccctggctgtcctggaactcactctgtag
acctggctagcttcaaactcagaaaaaacgcgcctgcctctgcctcctga
gtgctggggattaaaggcatgcaccaccacacccagcttctactttcttt
atacctattcaatacagtactttattagtcttagctagagcaataagaca
gctgtcaagactgggtttaattttttgtttgcatcaaggtggaccagaga
atattctagaaagccaaagcatatcatttcttagaaaagggtagaattgt
agagggaagggtataatatggaaaggcaaaagaaaatagggaaaaaccct
tcaaatggttagtaagttgtagttcaccaacttcacacttacatacctaa
ggtagggagaaggaatctgatgttgaatgtgaaatgggagcaaatttaaa
atccaggtgggtaactgacaatctaaccctcaaattaggtaggagattg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_27944502_27945057
seq2: B6Ng01-201I17.g_642_1211

seq1  GCAGGGTGGTCAACTTTCTTTTTTTTTTTTTTTTTTTTGTTTTTGTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTGGTCAACTTTCTTTTTTTTTTTTTTTTTTTTGTTTTTGTTTTT  50

seq1  GTTTTTGTTTTTGTTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTTTTGTTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCT  100

seq1  GTCCTGGAACTCACTCTGTAGACCTGGCTAGCTTCAAACTCAGAAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAACTCACTCTGTAGACCTGGCTAGCTTCAAACTCAGAAAAAAC  150

seq1  GCGCCTGCCTCTGCCTCCTGAGTGCT-GGGATTAAAGGCATGCACCACCA  199
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCGCCTGCCTCTGCCTCCTGAGTGCTGGGGATTAAAGGCATGCACCACCA  200

seq1  CACCCAGCTTCTACTTTCTTTATACCTATTCAATACAGTACTTTATAAGT  249
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACCCAGCTTCTACTTTCTTTATACCTATTCAATACAGTACTTTATTAGT  250

seq1  CTTAGCTAGAGCAATAAGACAGCTGTCAAGACT-GGTTTAA-TTTTTGTT  297
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  CTTAGCTAGAGCAATAAGACAGCTGTCAAGACTGGGTTTAATTTTTTGTT  300

seq1  TGCATCAAG--TGACCAGAG-ATATTCTAG-AAGCCAAAGCATATCATTT  343
      |||||||||   |||||||| ||||||||| |||||||||||||||||||
seq2  TGCATCAAGGTGGACCAGAGAATATTCTAGAAAGCCAAAGCATATCATTT  350

seq1  C-TAGAAAA-GGTAGAATTGTAGA-GGAAGGGTAT-ATAT-GAAAAGCAA  388
      | ||||||| |||||||||||||| |||||||||| |||| |||| ||||
seq2  CTTAGAAAAGGGTAGAATTGTAGAGGGAAGGGTATAATATGGAAAGGCAA  400

seq1  AAGAAAAATAGGAAAAA-CCTTCAAATTGTTAGTAAGTTGTAATTCACCA  437
      |||||||   ||||||| ||||||||| |||||||||||||| |||||||
seq2  AAGAAAATAGGGAAAAACCCTTCAAATGGTTAGTAAGTTGTAGTTCACCA  450

seq1  ACTTCACACTTAACATAACTAAAGTAGGGAGAAAGAATCTGATGTTGAAT  487
      ||||||||||| ||||| |||| |||||||||| ||||||||||||||||
seq2  ACTTCACACTT-ACATACCTAAGGTAGGGAGAAGGAATCTGATGTTGAAT  499

seq1  G-AAAAT--GAGCAAAATTTTAAAAATCAAGT-TGTAAATGACAATCTAA  533
      |  ||||  |||||||  |||||||  || ||  |||| |||||||||||
seq2  GTGAAATGGGAGCAAA--TTTAAAATCCAGGTGGGTAACTGACAATCTAA  547

seq1  -CCTCAAATTTAGGTAAGAGATTG  556
       ||||||| ||||||| |||||||
seq2  CCCTCAAA-TTAGGTAGGAGATTG  570