BAC Information

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BAC

Clone NameB6Ng01-203I12
Chromosome16 (Build37)
Map Location 82,129,877 - 82,130,954
singlet/doubletsinglet
Overlap genenone
Upstream geneNcam2, LOC621470, LOC435484, Pgk1-ps1
Downstream geneEG665260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203I12.bB6Ng01-203I12.g
ACCGA023719GA023720
length1,0961,082
definitionB6Ng01-203I12.b B6Ng01-203I12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatggtatataggatagaacagagttacggtaagaaggagcaca
ggaggatactagagcagtaaccattaaaaatgttcatgactgggagatta
gaatagaggagggattatttgaaagaataactgtcattaaagtactttga
gaattccatatcaaaattgattactatagaagcttcataaaatatataaa
tatgaatattaataaaaataatttaaaatgtagtttctagtgagtatagt
ttctctccctgatatcatatgttttcaagtcaaaagaccagtatcaggta
agaattacctcttttcaagatgttagccaagaaacaccaactgaaagaat
gcatctctttctaattccttgaagaattgagttggaattttgatggggat
tgcattgaatctgtagattgcttttggcaagatagccatttttacaatgt
tgatcctgccaatccatgaacatgggagatctttccatattctgagatct
tctttaatttctttcttcagagacttgaagttcttatcatacagatcttt
cacttccttagagtcacgccatgatattttatattatttgtgactattga
gaagggtgttctttccctaatttctttctcagcctgtttatcctttgtgt
acagaaaggccattgacttgtttgagttaattttgtgtccagctacttca
ctgaagctgtttatcaggtttaggagttctctggtggaatttttagggtc
acttatatatacaatcatatcatctgcaaagagtgatattttgacttcat
cttttccaatttgtatccccttgatctccttttgttgtcgaattgctctg
gctaggacttcaagtactatgttgaagaggtagggagaaagtgggcagcc
ttgtctagtccctgattttagtgggattgcttcaagcttctcaccattta
ctttgatgttggctactgggttgctattagattgcttttatcatgttagg
tatgggctttgaaggtcctgattctttcagactttaatcatgatgggtgt
tggatcttgtcgatgccttctccacatctatgagaatgatcatgtg

gaattcatcagtcaaggggtgacagggcttttaagaggccgtagttttgt
ttcacaaatgcaatttcaaggagatttgccaaaacttagtctgtggatgc
tcagtgtgcctaaaaacatgtaactgccatgtgggactttaaagcatcac
ttgtttcatttgtttgtttgtttaaggtgggggattacatattatttggt
taaacttaaatagaagactctatgtctaatttcagtcattatttgtttgc
ttcactaactctcaagatttattgagtacggtgcattgtgatcgtggatt
cagatatactaacaattctgcttagtttttaaaattcataaacattgaag
gtgcagtacgatagaactttctctgaggtcaggaaacacacacatccacc
tccttatcccacccagatagagaaaataatatcaaaatccaactaactga
accagtgggattaaattcagccaccagcagcagtgtgcatgaaggatgac
ttgaaaagagttgggatgactcaaaagcagaggaatcaccaaaaaaaaaa
aaaaaaagcctttctagtactgatggggactcttgaatgctggactcctg
tagctcactgcatgtcagctttcccaacaacatggctgttttctccttct
ttcatgaaagctggctgttctgtgtgaaatgtgtcatctaggcagcttca
ctggtatggcattatcttcagcagcctgtagaacttatgtatgcgaggga
agggctgtgagtaggaagatccccagtttcagagactttctgaaagtatt
gggctgtttacttttcaatagtaaggatctctgttgaagggtggaatatt
ttttataaccctgtagaaaattgtgtgtcttcaggaacttccctaaattg
tagaagagatttttgttgttattgttctgatttgttgttattgttggaat
ttgtttttctttctctcaatgcaagctattacataaacagaagaatagga
tcaaaagagtttcttatgattattgcaatgttattcctgttcaaccttaa
acacattctgtaactgatcctgaagatttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_82129877_82130954
seq2: B6Ng01-203I12.g_62_1143

seq1  GAATTCATCAGTCAAGGGGTGACAGGGCTTTTAAGAGGCCGTAGTTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGTCAAGGGGTGACAGGGCTTTTAAGAGGCCGTAGTTTTGT  50

seq1  TTCACAAATGCAATTTCAAGGAGATTTGCCAAAACTTAGTCTGTGGATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAATGCAATTTCAAGGAGATTTGCCAAAACTTAGTCTGTGGATGC  100

seq1  TCAGTGTGCCTAAAAACATGTAACTGCCATGTGGGACTTTAAAGCATCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTGCCTAAAAACATGTAACTGCCATGTGGGACTTTAAAGCATCAC  150

seq1  TTGTTTCATTTGTTTGTTTGTTTAAGGTGGGGGATTACATATTATTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCATTTGTTTGTTTGTTTAAGGTGGGGGATTACATATTATTTGGT  200

seq1  TAAACTTAAATAGAAGACTCTATGTCTAATTTCAGTCATTATTTGTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTAAATAGAAGACTCTATGTCTAATTTCAGTCATTATTTGTTTGC  250

seq1  TTCACTAACTCTCAAGATTTATTGAGTACGGTGCATTGTGATCGTGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTAACTCTCAAGATTTATTGAGTACGGTGCATTGTGATCGTGGATT  300

seq1  CAGATATACTAACAATTCTGCTTAGTTTTTAAAATTCATAAACATTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATACTAACAATTCTGCTTAGTTTTTAAAATTCATAAACATTGAAG  350

seq1  GTGCAGTACGATAGAACTTTCTCTGAGGTCAGGAAACACACACATCCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTACGATAGAACTTTCTCTGAGGTCAGGAAACACACACATCCACC  400

seq1  TCCTTATCCCACCCAGATAGAGAAAATAATATCAAAATCCAACTAACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATCCCACCCAGATAGAGAAAATAATATCAAAATCCAACTAACTGA  450

seq1  ACCAGTGGGATTAAATTCAGCCACCAGCAGCAGTGTGCATGAAGGATGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGGGATTAAATTCAGCCACCAGCAGCAGTGTGCATGAAGGATGAC  500

seq1  TTGAAAAGAGTTGGGATGACTCAAAAGCAGAGGAATCACCAAAAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGAGTTGGGATGACTCAAAAGCAGAGGAATCACCAAAAAAAAAA  550

seq1  AAAAAAAGCCTTTCTAGTACTGATGGGGACTCTTGAATGCTGGACTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGCCTTTCTAGTACTGATGGGGACTCTTGAATGCTGGACTCCTG  600

seq1  TAGCTCACTGCATGTCAGCTTTCCCAACAACATGGCTGTTTTCTCCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCACTGCATGTCAGCTTTCCCAACAACATGGCTGTTTTCTCCTTCT  650

seq1  TTCATGAAAGCTGGCTGTTCTGTGTGAAATGTGTCATCTAGGCAGCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAAAGCTGGCTGTTCTGTGTGAAATGTGTCATCTAGGCAGCTTCA  700

seq1  CTGGTATGGCATTATCTTCAGCAGCCTGTAGAACTTATGTATGCGAGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATGGCATTATCTTCAGCAGCCTGTAGAACTTATGTATGCGAGGGA  750

seq1  AGGGCTGTGAGTAGGAAGATCCCCAGTTTCAGAGACTTTCTGAAAGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGTGAGTAGGAAGATCCCCAGTTTCAGAGACTTTCTGAAAGTATT  800

seq1  GGGCTGTTTACTTTTCAATAGTAAGGATCTCTGTTGAAGGGTGGAATA-T  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGGCTGTTTACTTTTCAATAGTAAGGATCTCTGTTGAAGGGTGGAATATT  850

seq1  TTTTATAACCCTGTAGAAAATTGTGTGTCTTCAGGAACTTCCCTAAATTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAACCCTGTAGAAAATTGTGTGTCTTCAGGAACTTCCCTAAATTG  900

seq1  TAGAAGAGATTTTTGTTGTTATTGTTCTGATTTGTTGTTATTGTTGGGAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAGAAGAGATTTTTGTTGTTATTGTTCTGATTTGTTGTTATTGTTGGAAT  950

seq1  TTGTTTTTTCTTTCTCTCAATGGAAGCTATTACAT-AACAGAAGAATA-G  997
      ||| |||||||||||||||||| |||||||||||| |||||||||||| |
seq2  TTG-TTTTTCTTTCTCTCAATGCAAGCTATTACATAAACAGAAGAATAGG  999

seq1  ATCAAAAGAGTTTTTTATGATTATTGC-ATGTTATT-CTGTTCAGCTTTA  1045
      ||||||||||||| ||||||||||||| |||||||| ||||||| | |||
seq2  ATCAAAAGAGTTTCTTATGATTATTGCAATGTTATTCCTGTTCAACCTTA  1049

seq1  AACACAATTTCT-TTACTGAT-CTGAAGATTTCTG  1078
      ||||||  |||| | |||||| |||||||||||||
seq2  AACACA--TTCTGTAACTGATCCTGAAGATTTCTG  1082


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