BAC Information

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BAC

Clone NameB6Ng01-203I17
Chromosome16 (Build37)
Map Location 82,673,014 - 82,826,683
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC621470, LOC435484, Pgk1-ps1, EG665260
Downstream geneEG545172, LOC100039572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203I17.bB6Ng01-203I17.g
ACCGA023729GA023730
length1,1521,158
definitionB6Ng01-203I17.b B6Ng01-203I17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,673,014 - 82,674,185)(82,825,500 - 82,826,683)
sequence
gaattctcttacatttccaagttagtggcatacgaaggtaagtttcccaa
gtgatgtttgtcaatgaaaagcactagggaattcgctgatgaaatgttat
gcctttgtctatgacagtaggttatttggcatcccatatctctcaaaatt
catcatcctttactttggaatctatctttgtgtaagttaaagttctataa
tggtctcaggaggcatacaaatctatgctaaatatgtcttctacagtaaa
ttatagatttcattttactgtatgtgaacattttatatatttagctcctg
agtactattatttgaaaacgaacaaaatacacttaatgttgaaaacatga
tcaccaggacccatctcatactgagaatgtactctcaacatctttctttt
tgagagtacatacagatttgtctttcatttttaatgtagattggaactct
tgttttcattaaagctatcttcatcaattctttaacaagctcctatattg
cacatggataatattcaccatgcccttcctttctccctttctagatgatg
tcatatgcccaccaaacattgtttctcatttttctctccattaactttac
agcatttttccttgcattttcctactgctccttctctgtagcttgtcaaa
ttcatgatcttcctgtgtatacacatatattttgctgtctcactttagtc
ttacatttgtatagaataccccaagaggatgctcattcctattccaggga
aagatgatttttttcctctccccacacacatttgttgcattgacctatgt
ctgaggcctgctcctatctagatgtgcttgtcaacaggtgtctttgtgca
gatcttgttttggcatcattattactataacacaattgaaatatgaagtt
cttaaagaatttttactgaagaggaatgtcctttgaattatttcttgatg
aatcactttattttttcaaggaaaaagcaccatctagtatagttgaaact
tatatactgtagtagatttatatagtgatatggctgttattaaatttgaa
cttctgtctctgatgcccagctatgcgtgagaaaagcatacttggcagtc
tcattgtttctgtggtttcaattgctctaatttgaaatcatttgaacata
at

gaattcactggaaattgatgtacctaagctgaaccataagtgaactgagg
caagctcattatttctgaaccagaataaaaatctcaaccactcctatgta
cagcttatcgcagaagaactaaaaattagattgctttgggaaataaaatc
gtcttggtttgaattgtattgctgtgaaaagaccccatgaccaaggcaac
atttaattgggtcttgcttacaggttcagagagaggttcagtctattttc
atcaaggaggtaagcatgatgttgtttaggcatgcttggtgctagcgtag
ctgagagttctatatttgatccaaaggcagcaaggagaaggtcatccttt
ccaggcagccaggaggagggtctctttcctaccctaggcagaacttgatc
atggaacattaaagcctaccacctaatccaataaggccacacctcctaat
agtgacacttaccatgagacaagcatatttaaaacaccacaaatgtttat
tatcaatgagaatatgtttataaaactactacattcaattacaaccttgc
ataactttaattgtatccatttaaaatgaagaaaatgggtaaacctgtta
gttaaaattatgtgtttatttatgtgacaaaatgtattaagtccttctat
aacagagaatcaccctgttaggtgttttccctgagtcgcagacaatatga
gaagtgtcacaaagaagaacttccttggaagatcatttcagaacagaagg
tcaaaaccttgctgtttgcaaagggcagagccccctgatgatctcctagc
cctctatttatcagagtggcattcttcctagtgtgtccttaagttgtgta
cttatgaaaaagtatcagaagtcacttcatgagttagaataaaatttaga
cttataccaataatagtaaactaaaatctcagaatgtcagattatatgta
ttcttctttatgctagctaaatttgaacgtgtctatacatcattttaaat
ttttcagtgtaaatttgatcttagatcatattcatattatcatcaatact
ttctcatattgtctatcattttatcagtaaacacatacaattcatatcca
atttgttaaattgtgcaaactgactgcatcatatgaatcaataatatgcc
ttaataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_82673014_82674185
seq2: B6Ng01-203I17.b_30_1181

seq1  GAATTCTCTTACATTTCCAAGTTAGTGGCATACGAAGGTAAGTTTCCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTACATTTCCAAGTTAGTGGCATACGAAGGTAAGTTTCCCAA  50

seq1  GTGATGTTTGTCAATGAAAAGCACTAGGGAATTCGCTGATGAAATGTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTTTGTCAATGAAAAGCACTAGGGAATTCGCTGATGAAATGTTAT  100

seq1  GCCTTTGTCTATGACAGTAGGTTATTTGGCATCCCATATCTCTCAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGTCTATGACAGTAGGTTATTTGGCATCCCATATCTCTCAAAATT  150

seq1  CATCATCCTTTACTTTGGAATCTATCTTTGTGTAAGTTAAAGTTCTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCCTTTACTTTGGAATCTATCTTTGTGTAAGTTAAAGTTCTATAA  200

seq1  TGGTCTCAGGAGGCATACAAATCTATGCTAAATATGTCTTCTACAGTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCAGGAGGCATACAAATCTATGCTAAATATGTCTTCTACAGTAAA  250

seq1  TTATAGATTTCATTTTACTGTATGTGAACATTTTATATATTTAGCTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGATTTCATTTTACTGTATGTGAACATTTTATATATTTAGCTCCTG  300

seq1  AGTACTATTATTTGAAAACGAACAAAATACACTTAATGTTGAAAACATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTATTATTTGAAAACGAACAAAATACACTTAATGTTGAAAACATGA  350

seq1  TCACCAGGACCCATCTCATACTGAGAATGTACTCTCAACATCTTTCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGGACCCATCTCATACTGAGAATGTACTCTCAACATCTTTCTTTT  400

seq1  TGAGAGTACATACAGATTTGTCTTTCATTTTTAATGTAGATTGGAACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTACATACAGATTTGTCTTTCATTTTTAATGTAGATTGGAACTCT  450

seq1  TGTTTTCATTAAAGCTATCTTCATCAATTCTTTAACAAGCTCCTATATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCATTAAAGCTATCTTCATCAATTCTTTAACAAGCTCCTATATTG  500

seq1  CACATGGATAATATTCACCATGCCCTTCCTTTCTCCCTTTCTAGATGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGATAATATTCACCATGCCCTTCCTTTCTCCCTTTCTAGATGATG  550

seq1  TCATATGCCCACCAAACATTGTTTCTCATTTTTCTCTCCATTAACTTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGCCCACCAAACATTGTTTCTCATTTTTCTCTCCATTAACTTTAC  600

seq1  AGCATTTTTCCTTGCATTTTCCTACTGCTCCTTCTCTGTAGCTTGTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTTCCTTGCATTTTCCTACTGCTCCTTCTCTGTAGCTTGTCAAA  650

seq1  TTCATGATCTTCCTGTGTATACACATATATTTTGCTGTCTCACTTTAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATCTTCCTGTGTATACACATATATTTTGCTGTCTCACTTTAGTC  700

seq1  TTACATTTGTATAGAATACCCCAAGAGGATGCTCATTCCTATTCCAGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTGTATAGAATACCCCAAGAGGATGCTCATTCCTATTCCAGGGA  750

seq1  AAGATGATTTTTTTCCTCTCCCCACACACATTTGTTGCATTGACCTATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGATTTTTTTCCTCTCCCCACACACATTTGTTGCATTGACCTATGT  800

seq1  CTGAGGCCTGCTCCTATCTAGATGTGCTTGTCAACAGGTGTCTTTGTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCCTGCTCCTATCTAGATGTGCTTGTCAACAGGTGTCTTTGTGCA  850

seq1  GATCTTGTTTTGGCATCATTATTACTATAACACAATTGAAATATGAAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTGTTTTGGCATCATTATTACTATAACACAATTGAAATATGAAGTT  900

seq1  CTTAAAGAATTTTTACTGAAGAGGAATGTCCTTTGAATTATTTCTTGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGAATTTTTACTGAAGAGGAATGTCCTTTGAATTATTTCTTGATG  950

seq1  AATCACTTTATTTTTTCAAGGAAAAAAGCAACCATCCTAGTATAGGTTGA  1000
      ||||||||||||||||||||| ||||||| ||||| |||||||| |||||
seq2  AATCACTTTATTTTTTCAAGG-AAAAAGC-ACCAT-CTAGTATA-GTTGA  996

seq1  AACTTATAATACTGTAAGTAGATTTATAATAGTGATATGGCTGTTATTAA  1050
      ||||||| ||||||| ||||||||||| |||||||||||||||||||| |
seq2  AACTTAT-ATACTGT-AGTAGATTTAT-ATAGTGATATGGCTGTTATT-A  1042

seq1  AATTTGAACTTTTTCTTGTCTTCTGTATTGCCCAGCCTTAATGCCGTGAG  1100
      |||||||||||     |||| ||||   ||||||||    ||| ||||||
seq2  AATTTGAACTT----CTGTC-TCTG--ATGCCCAGC---TATG-CGTGAG  1081

seq1  AAAAGCAATACTT-GCAGTCTCATTG-TTCTGTGTTTCAAATTGCTCTAA  1148
      |||||| |||||| |||||||||||| ||||||| ||  |||||||||||
seq2  AAAAGC-ATACTTGGCAGTCTCATTGTTTCTGTGGTTTCAATTGCTCTAA  1130

seq1  TTTGGAAAATCATTTGAACATAAT  1172
      ||||  ||||||||||||||||||
seq2  TTTG--AAATCATTTGAACATAAT  1152


seq1: chr16_82825500_82826683
seq2: B6Ng01-203I17.g_62_1219 (reverse)

seq1  TGTATTAAGGCATATTAATTTTGATTCATTATTTTATTACCAATTACATT  50
      |||||||||||||||||   ||||||||      ||| |   | | || |
seq2  TGTATTAAGGCATATTA---TTGATTCA------TATGATGCAGT-CAGT  40

seq1  TTTCACATATTAAACATATTGTGATATGGATATTGTATGGTGTTTACCTT  100
      || |||| ||| |||| |||| ||||||   ||||||| ||||||||  |
seq2  TTGCACA-ATTTAACAAATTG-GATATG--AATTGTAT-GTGTTTAC--T  83

seq1  GATAAAATGATAGACAATATGAGGAAAGTAATGATGATTAAATATG-ATA  149
      |||||||||||||||||||||| ||||||| |||||||  |||||| |||
seq2  GATAAAATGATAGACAATATGA-GAAAGTATTGATGAT--AATATGAATA  130

seq1  TGATTCTAAGATCAAATTTAACACTGAAAAATTTAAAATGATGTATTAGA  199
      ||| ||||||||||||||| ||||||||||||||||||||||||| ||||
seq2  TGA-TCTAAGATCAAATTT-ACACTGAAAAATTTAAAATGATGTA-TAGA  177

seq1  CACGTTCAAATTTTAGCTAGCATTAAAGAAGAATACATTATAATCTGACA  249
      |||||||||| ||||||||||| |||||||||||||| ||||||||||||
seq2  CACGTTCAAA-TTTAGCTAGCA-TAAAGAAGAATACA-TATAATCTGACA  224

seq1  TTCTGAGATTTTAGTTTACTATTATTGGTTATAAGTCTAAATTTTATTCT  299
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCTGAGATTTTAGTTTACTATTATTGG-TATAAGTCTAAATTTTATTCT  273

seq1  AACTCATGAAGTGACTTCTGATACTTTTTCATAAGTACACAACTTAAGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGAAGTGACTTCTGATACTTTTTCATAAGTACACAACTTAAGGA  323

seq1  CACACTAGGAAGAATGCCACTCTGATAAATAGAGGGCTAGGAGATCATCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAGGAAGAATGCCACTCTGATAAATAGAGGGCTAGGAGATCATCA  373

seq1  GGGGGCTCTGCCCTTTGCAAACAGCAAGGTTTTGACCTTCTGTTCTGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTCTGCCCTTTGCAAACAGCAAGGTTTTGACCTTCTGTTCTGAAA  423

seq1  TGATCTTCCAAGGAAGTTCTTCTTTGTGACACTTCTCATATTGTCTGCGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTCCAAGGAAGTTCTTCTTTGTGACACTTCTCATATTGTCTGCGA  473

seq1  CTCAGGGAAAACACCTAACAGGGTGATTCTCTGTTATAGAAGGACTTAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGAAAACACCTAACAGGGTGATTCTCTGTTATAGAAGGACTTAAT  523

seq1  ACATTTTGTCACATAAATAAACACATAATTTTAACTAACAGGTTTACCCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGTCACATAAATAAACACATAATTTTAACTAACAGGTTTACCCA  573

seq1  TTTTCTTCATTTTAAATGGATACAATTAAAGTTATGCAAGGTTGTAATTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCATTTTAAATGGATACAATTAAAGTTATGCAAGGTTGTAATTG  623

seq1  AATGTAGTAGTTTTATAAACATATTCTCATTGATAATAAACATTTGTGGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTAGTTTTATAAACATATTCTCATTGATAATAAACATTTGTGGT  673

seq1  GTTTTAAATATGCTTGTCTCATGGTAAGTGTCACTATTAGGAGGTGTGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAATATGCTTGTCTCATGGTAAGTGTCACTATTAGGAGGTGTGGC  723

seq1  CTTATTGGATTAGGTGGTAGGCTTTAATGTTCCATGATCAAGTTCTGCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGGATTAGGTGGTAGGCTTTAATGTTCCATGATCAAGTTCTGCCT  773

seq1  AGGGTAGGAAAGAGACCCTCCTCCTGGCTGCCTGGAAAGGATGACCTTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGGAAAGAGACCCTCCTCCTGGCTGCCTGGAAAGGATGACCTTCT  823

seq1  CCTTGCTGCCTTTGGATCAAATATAGAACTCTCAGCTACGCTAGCACCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTGCCTTTGGATCAAATATAGAACTCTCAGCTACGCTAGCACCAA  873

seq1  GCATGCCTAAACAACATCATGCTTACCTCCTTGATGAAAATAGACTGAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCTAAACAACATCATGCTTACCTCCTTGATGAAAATAGACTGAAC  923

seq1  CTCTCTCTGAACCTGTAAGCAAGACCCAATTAAATGTTGCCTTGGTCATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTGAACCTGTAAGCAAGACCCAATTAAATGTTGCCTTGGTCATG  973

seq1  GGGTCTTTTCACAGCAATACAATTCAAACCAAGACGATTTTATTTCCCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTTTCACAGCAATACAATTCAAACCAAGACGATTTTATTTCCCAA  1023

seq1  AGCAATCTAATTTTTAGTTCTTCTGCGATAAGCTGTACATAGGAGTGGTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCTAATTTTTAGTTCTTCTGCGATAAGCTGTACATAGGAGTGGTT  1073

seq1  GAGATTTTTATTCTGGTTCAGAAATAATGAGCTTGCCTCAGTTCACTTAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTTATTCTGGTTCAGAAATAATGAGCTTGCCTCAGTTCACTTAT  1123

seq1  GGTTCAGCTTAGGTACATCAATTTCCAGTGAATTC  1184
      |||||||||||||||||||||||||||||||||||
seq2  GGTTCAGCTTAGGTACATCAATTTCCAGTGAATTC  1158


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