BAC Information

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BAC

Clone NameB6Ng01-203K18
Chromosome16 (Build37)
Map Location 75,123,786 - 75,124,842
singlet/doubletsinglet
Overlap genenone
Upstream geneRobo2, LOC665042
Downstream geneD930038D03Rik, Rbm11, Stch, LOC546667, Samsn1, 4930578N18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203K18.bB6Ng01-203K18.g
ACCGA023823GA023824
length1,2111,055
definitionB6Ng01-203K18.b B6Ng01-203K18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctcaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatacaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactgaggtgactgc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaag
gaacttgcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaacttgccaaacacatgaaattcaag
aagaatgaagaccaaagtgtggacactttaccctttcttagaaatgggaa
cagaacacccatggatggagttacagagacaaaatttggagctgtgacga
aaggatggaccatctagtgattgccatatccagggatccatcccataatc
agcttccaaatgctgacaccatcgcatacactagcaagattttgctgaaa
ggacacagatatagctctctcttgtgagactatgccagggcctagcaaac
acagaaagtggatgatcacagtcagctattggatgggtcacagggccccc
aatggaggagctagagaaattacccaaggagctaagggaactgcaaccgt
atagtggaacacatatgactaaccagtacccgggagctcttgtctttagc
tgcatatgtatcaaagatgggcctagtcagccatcactgcaagaggaggc
cattggacttgcaactttattgccccagtacaggggacgccccggccaaa
agggaagtgcgttgttatgggggtactgcgtggcataaagtgtactcttc
acaccatgtac
gaattcagtgacatgacgctgtggacctctgtattctctgaccttactaa
agaacaactacttactctaaatgagtaatgttaatagaagtgagtggttt
gaatttgattgacattttgtagttatttctctacatatttaacccattag
gattttaaatccctataatacctaggttgtgttaacacttgcatatgaaa
caatgtttagtgaaaatcagaaacacttttaacattgtatttaacaccag
gttatgagcctgccttggtgagtgatgattcttgaggagtttcaaatctc
acatttagtttctgaactttacatcaataggtgggaaaactgacactgga
gatgacttcatttctctagtgcctgttgctgctgtgttttgcagcaacct
tgaaaagaaagcatgcatgctgccatttacagtaccatgtttttatcagc
cttctggaaaagcaaaataaggcacatgtatgtttttatacgttttaaaa
tttttatagggttactgataacagcatattcataaaacgtaagacctcag
tcaggttggcttagtaatgtataaaaatttaacattttaattaaataaat
agatagaatgtaaaatgtaacaacagctaggcagactttttgagagttgg
taataattacaatgatttagccagacaaatttagtctatttattcggaga
tagtctaagagatacaaaaggtaaccaatggattcttttaccttaatatt
taaaagttaacatgagggggagctagagaaaggacccaaggagctgaagg
agcttgcagcttcataggaggaacaacaacatcaaccaaccactaccccc
cagagctcccagggactaaaccaccaactaaaagagtacacatagaggga
ctaatggctttagctgcatatgtagcagaggatgaccttatagtcatcaa
tgggaggagagtcatgggtctgtgaatgctctatgcccagtgtaggggaa
tgtgaggcaggaattgcaagtgactggttggtgagcaagggggggggggg
gggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_75123786_75124842
seq2: B6Ng01-203K18.g_62_1116 (reverse)

seq1  ----CTCCCCCCCCCCCTTGCTCACCAACCCAGTCACTTGCAATTCCTGG  46
          | |||||||||||||||||||||| |||||||||||||||||||| 
seq2  CTCCCCCCCCCCCCCCCTTGCTCACCAA-CCAGTCACTTGCAATTCCTG-  48

seq1  CCCTCACATTCCCCTACACTGGGGCATAGAGCATTCACAAGACCAAGGAC  96
       ||||||||||||||||||| ||||||||||||||||| ||||| | || 
seq2  -CCTCACATTCCCCTACACT-GGGCATAGAGCATTCAC-AGACCCATGA-  94

seq1  CTCTCCTCCCATTGATGACTAATAAGGTCATCCTCTGCTACATATGCAGC  146
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTCTCCTCCCATTGATGACT-ATAAGGTCATCCTCTGCTACATATGCAGC  143

seq1  TAAAGCCATTAGTCCCTCTATGTGTACTC-TTTAGTTGGTGGTTTAGTCC  195
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TAAAGCCATTAGTCCCTCTATGTGTACTCTTTTAGTTGGTGGTTTAGTCC  193

seq1  CTGGGAGCTCTGGGGGGTAGTGGTTGGTTGATGTTGTTGTTCCTCCTATG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGCTCTGGGGGGTAGTGGTTGGTTGATGTTGTTGTTCCTCCTATG  243

seq1  AAGCTGCAAGCTCCTTCAGCTCCTTGGGTCCTTTCTCTAGCTCCCCCTCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCAAGCTCCTTCAGCTCCTTGGGTCCTTTCTCTAGCTCCCCCTCA  293

seq1  TGTTAACTTTTAAATATTAAGGTAAAAGAATCCATTGGTTACCTTTTGTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACTTTTAAATATTAAGGTAAAAGAATCCATTGGTTACCTTTTGTA  343

seq1  TCTCTTAGACTATCTCCGAATAAATAGACTAAATTTGTCTGGCTAAATCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAGACTATCTCCGAATAAATAGACTAAATTTGTCTGGCTAAATCA  393

seq1  TTGTAATTATTACCAACTCTCAAAAAGTCTGCCTAGCTGTTGTTACATTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTATTACCAACTCTCAAAAAGTCTGCCTAGCTGTTGTTACATTT  443

seq1  TACATTCTATCTATTTATTTAATTAAAATGTTAAATTTTTATACATTACT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCTATCTATTTATTTAATTAAAATGTTAAATTTTTATACATTACT  493

seq1  AAGCCAACCTGACTGAGGTCTTACGTTTTATGAATATGCTGTTATCAGTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAACCTGACTGAGGTCTTACGTTTTATGAATATGCTGTTATCAGTA  543

seq1  ACCCTATAAAAATTTTAAAACGTATAAAAACATACATGTGCCTTATTTTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATAAAAATTTTAAAACGTATAAAAACATACATGTGCCTTATTTTG  593

seq1  CTTTTCCAGAAGGCTGATAAAAACATGGTACTGTAAATGGCAGCATGCAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAGAAGGCTGATAAAAACATGGTACTGTAAATGGCAGCATGCAT  643

seq1  GCTTTCTTTTCAAGGTTGCTGCAAAACACAGCAGCAACAGGCACTAGAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTTTCAAGGTTGCTGCAAAACACAGCAGCAACAGGCACTAGAGA  693

seq1  AATGAAGTCATCTCCAGTGTCAGTTTTCCCACCTATTGATGTAAAGTTCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTCATCTCCAGTGTCAGTTTTCCCACCTATTGATGTAAAGTTCA  743

seq1  GAAACTAAATGTGAGATTTGAAACTCCTCAAGAATCATCACTCACCAAGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAAATGTGAGATTTGAAACTCCTCAAGAATCATCACTCACCAAGG  793

seq1  CAGGCTCATAACCTGGTGTTAAATACAATGTTAAAAGTGTTTCTGATTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCATAACCTGGTGTTAAATACAATGTTAAAAGTGTTTCTGATTTT  843

seq1  CACTAAACATTGTTTCATATGCAAGTGTTAACACAACCTAGGTATTATAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAACATTGTTTCATATGCAAGTGTTAACACAACCTAGGTATTATAG  893

seq1  GGATTTAAAATCCTAATGGGTTAAATATGTAGAGAAATAACTACAAAATG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTAAAATCCTAATGGGTTAAATATGTAGAGAAATAACTACAAAATG  943

seq1  TCAATCAAATTCAAACCACTCACTTCTATTAACATTACTCATTTAGAGTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAAATTCAAACCACTCACTTCTATTAACATTACTCATTTAGAGTA  993

seq1  AGTAGTTGTTCTTTAGTAAGGTCAGAGAATACAGAGGTCCACAGCGTCAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTGTTCTTTAGTAAGGTCAGAGAATACAGAGGTCCACAGCGTCAT  1043

seq1  GTCACTGAATTC  1057
      ||||||||||||
seq2  GTCACTGAATTC  1055