BAC Information

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BAC

Clone NameB6Ng01-204K05
Chromosome16 (Build37)
Map Location 75,424,351 - 75,545,660
singlet/doubletdoublet
Overlap geneD930038D03Rik
Upstream geneLOC665042
Downstream geneRbm11, Stch, LOC546667, Samsn1, 4930578N18Rik, LOC100039457, Nrip1, LOC100039316
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204K05.bB6Ng01-204K05.g
ACCGA024528GA024529
length1,163942
definitionB6Ng01-204K05.b B6Ng01-204K05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,544,483 - 75,545,660)(75,424,351 - 75,425,296)
sequence
gaattcaaatgcctgaggcttataggggaaatctccttcaaaccaccaca
actaggttacttgtggcttcattttgtgattgctacttaattggttgctt
gattctagtttttgttgttgttgtttttaacagttacccaaatatagctt
gtcattaattggtatttttcaaatggcaatgatgaggtcatttgcactct
tgaatttgggcatttatacatttagctaaacatgattaatgacagtgtag
gtaaattcttgctgtggctttttgttttctgtttgtagtatatatgtgtg
tacatataatttcaagtatgagttcatgtgtttgttctgttattgtacat
atgtgaaggcatgtgaattataaaggccagagattttttttttgaaccta
gacttccattgaatctgagctcatggattcagtttcacacatataactgc
aagttctcacatgggatctttctgtgctccaccctgagtctgctttacat
ggctgctggggcttctaatttctgtcctcctgttgcatgggaagaacatt
acaacgtggagcttttcagtctcgtccttaaatgcttttgccgatagaca
catgttctcacctggtttaatttactttctaaagcagttttcacaataat
tctttatattgtgggtgcattattaaggaagtacaatataatatctttga
aaattcctcatgttttcttcatcctgaaacaaattttattttcagtactt
ttacaagtagctgtggtgcctgttgccttgattgtattgaaagttctatt
ggtatattttctttgtttctcaaaaaaatgacaaattattctctttggat
aatcaatattttattttctgaattggaacagttagattataatatgcctt
ataattttattcctatatctaagcttgctattaaggaatgattgattata
atatgtactataataacttaagcataaaagtaataaatcttatttttctt
cttatgaagatttgataaattaacttcttgtctgaatcctattgtcctga
cctgcagatttgttcctttctttcttttccttcctttctttttttaaata
agattcatctaagtttcctaccaacatcttgaatcgttcggtctgtatca
ttttctatgtttt

gaattctatgagatgaagtcataggtcatcctcaaaactaaaaagcaatg
ttaaagagaagcttcactcaatatcaaagcttttactctctgtaagatga
cgagaggtcttctaatgacaatgtacaattgacaaaaatttaatgtagta
atgggagctgaagaactgctacattgtttctggtttatgttgtgttaagc
aatggccacttcctgcccccgcttgattctttgggttttggcattaaagg
gttgctcagaaaggctgtataattatgagtctactgagtagaaagacaaa
caacctggaagctcagcacattacatagttctctggctggagacacactt
ttgtgaacatgcctgacaccaagttgaaggtttagagaccaatatgagga
ttagtcagttgttggtagactgaagaccgtgggcttacttgcagatagaa
ccctgagaatatttgacattgtttttttttaagaagaggcagctaccact
tgttttcatgattggtgttccccagctacttgattcaagactgtcctacc
tgctctctgatctagatgtaaaggagtgttccccaggtggcaggattgtc
tgctccatcagataaaacaataaactggagaaggtttgagaatgatcaat
tattcagccactctgcaaaaccttttaaaaccaaagtccaaagactaaat
gagatcaggaagaaggcattattttcaggtcttcaatttcttttctcagc
atgttctagaggcacaatgtaaaccagaaacaatggagcagacctattct
aatagccacttcctgatttcattttctttactccagttaacagaccttaa
atccagcctggtatggtataatgtctacaaatgagaaaaggaggggacaa
tttggggactgggtctaagggtggactgggggggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_75544483_75545660
seq2: B6Ng01-204K05.b_42_1204 (reverse)

seq1  AAAATATAGATAAATGATACAGACACCGAAAAGAAATTCAAGATGTT-GT  49
      |||| ||||| |||||||||||  ||||||     |||||||||||| ||
seq2  AAAACATAGA-AAATGATACAG--ACCGAA---CGATTCAAGATGTTGGT  44

seq1  AGAAAACATAGATGGAATCTTATTTAAAAAAAAGAAAAGAAAAGAAAAGA  99
      || |||| ||||| ||||||||||||||||||   |||| || |||||||
seq2  AGGAAACTTAGAT-GAATCTTATTTAAAAAAA--GAAAGGAAGGAAAAGA  91

seq1  AAAGAAAAGGAACAAAATCTGCAGGGCCAGGACAATAGGATTCAAGACAA  149
      ||   |||||||| ||||||||| || |||||||||||||||| ||||||
seq2  AA--GAAAGGAAC-AAATCTGCA-GGTCAGGACAATAGGATTC-AGACAA  136

seq1  G-AGTTAATTTATCAAATTCCTTCAT-AGAAG-AAAATAAGATTTATTAC  196
      | ||||||||||||||||  |||||| ||||| |||||||||||||||| 
seq2  GAAGTTAATTTATCAAAT--CTTCATAAGAAGAAAAATAAGATTTATTA-  183

seq1  CTTTTATGCCTTAAAGTTATTATAGTACAATATTATAATCAATCATTCCT  246
      |||||||||  | ||||||||||||||| |||||||||||||||||||||
seq2  CTTTTATGC--TTAAGTTATTATAGTAC-ATATTATAATCAATCATTCCT  230

seq1  T-ATAGCAAGCTTAGATATAGGAATAAAATTATAAGGCATATTATAATCT  295
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCAAGCTTAGATATAGGAATAAAATTATAAGGCATATTATAATCT  280

seq1  AACTGTTCCAATTCAGAAAATAAAATATTGATTATCCAAAGAGAATAATT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTCCAATTCAGAAAATAAAATATTGATTATCCAAAGAGAATAATT  330

seq1  TGTCATTTTTTTGAGAAACAAAGAAAATATACCAATAGAACTTTCAATAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTTTTGAGAAACAAAGAAAATATACCAATAGAACTTTCAATAC  380

seq1  AATCAAGGCAACAGGCACCACAGCTACTTGTAAAAGTACTGAAAATAAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGGCAACAGGCACCACAGCTACTTGTAAAAGTACTGAAAATAAAA  430

seq1  TTTGTTTCAGGATGAAGAAAACATGAGGAATTTTCAAAGATATTATATTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCAGGATGAAGAAAACATGAGGAATTTTCAAAGATATTATATTG  480

seq1  TACTTCCTTAATAATGCACCCACAATATAAAGAATTATTGTGAAAACTGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTTAATAATGCACCCACAATATAAAGAATTATTGTGAAAACTGC  530

seq1  TTTAGAAAGTAAATTAAACCAGGTGAGAACATGTGTCTATCGGCAAAAGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAGTAAATTAAACCAGGTGAGAACATGTGTCTATCGGCAAAAGC  580

seq1  ATTTAAGGACGAGACTGAAAAGCTCCACGTTGTAATGTTCTTCCCATGCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGGACGAGACTGAAAAGCTCCACGTTGTAATGTTCTTCCCATGCA  630

seq1  ACAGGAGGACAGAAATTAGAAGCCCCAGCAGCCATGTAAAGCAGACTCAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGGACAGAAATTAGAAGCCCCAGCAGCCATGTAAAGCAGACTCAG  680

seq1  GGTGGAGCACAGAAAGATCCCATGTGAGAACTTGCAGTTATATGTGTGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGCACAGAAAGATCCCATGTGAGAACTTGCAGTTATATGTGTGAA  730

seq1  ACTGAATCCATGAGCTCAGATTCAATGGAAGTCTAGGTTCAAAAAAAAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATCCATGAGCTCAGATTCAATGGAAGTCTAGGTTCAAAAAAAAAA  780

seq1  TCTCTGGCCTTTATAATTCACATGCCTTCACATATGTACAATAACAGAAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGCCTTTATAATTCACATGCCTTCACATATGTACAATAACAGAAC  830

seq1  AAACACATGAACTCATACTTGAAATTATATGTACACACATATATACTACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATGAACTCATACTTGAAATTATATGTACACACATATATACTACA  880

seq1  AACAGAAAACAAAAAGCCACAGCAAGAATTTACCTACACTGTCATTAATC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAACAAAAAGCCACAGCAAGAATTTACCTACACTGTCATTAATC  930

seq1  ATGTTTAGCTAAATGTATAAATGCCCAAATTCAAGAGTGCAAATGACCTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAGCTAAATGTATAAATGCCCAAATTCAAGAGTGCAAATGACCTC  980

seq1  ATCATTGCCATTTGAAAAATACCAATTAATGACAAGCTATATTTGGGTAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGCCATTTGAAAAATACCAATTAATGACAAGCTATATTTGGGTAA  1030

seq1  CTGTTAAAAACAACAACAACAAAAACTAGAATCAAGCAACCAATTAAGTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAAAACAACAACAACAAAAACTAGAATCAAGCAACCAATTAAGTA  1080

seq1  GCAATCACAAAATGAAGCCACAAGTAACCTAGTTGTGGTGGTTTGAAGGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCACAAAATGAAGCCACAAGTAACCTAGTTGTGGTGGTTTGAAGGA  1130

seq1  GATTTCCCCTATAAGCCTCAGGCATTTGAATTC  1178
      |||||||||||||||||||||||||||||||||
seq2  GATTTCCCCTATAAGCCTCAGGCATTTGAATTC  1163


seq1: chr16_75424351_75425296
seq2: B6Ng01-204K05.g_64_1005

seq1  GAATTCTATGAGATGAAGTCATAGGTCATCCTCAAAACTAAAAAGCAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGAGATGAAGTCATAGGTCATCCTCAAAACTAAAAAGCAATG  50

seq1  TTAAAGAGAAGCTTCACTCAATATCAAAGCTTTTACTCTCTGTAAGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGAAGCTTCACTCAATATCAAAGCTTTTACTCTCTGTAAGATGA  100

seq1  CGAGAGGTCTTCTAATGACAATGTACAATTGACAAAAATTTAATGTAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAGGTCTTCTAATGACAATGTACAATTGACAAAAATTTAATGTAGTA  150

seq1  ATGGGAGCTGAAGAACTGCTACATTGTTTCTGGTTTATGTTGTGTTAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGCTGAAGAACTGCTACATTGTTTCTGGTTTATGTTGTGTTAAGC  200

seq1  AATGGCCACTTCCTGCCCCCGCTTGATTCTTTGGGTTTTGGCATTAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCACTTCCTGCCCCCGCTTGATTCTTTGGGTTTTGGCATTAAAGG  250

seq1  GTTGCTCAGAAAGGCTGTATAATTATGAGTCTACTGAGTAGAAAGACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCAGAAAGGCTGTATAATTATGAGTCTACTGAGTAGAAAGACAAA  300

seq1  CAACCTGGAAGCTCAGCACATTACATAGTTCTCTGGCTGGAGACACACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGGAAGCTCAGCACATTACATAGTTCTCTGGCTGGAGACACACTT  350

seq1  TTGTGAACATGCCTGACACCAAGTTGAAGGTTTAGAGACCAATATGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAACATGCCTGACACCAAGTTGAAGGTTTAGAGACCAATATGAGGA  400

seq1  TTAGTCAGTTGTTGGTAGACTGAAGACCGTGGGCTTACTTGCAGATAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCAGTTGTTGGTAGACTGAAGACCGTGGGCTTACTTGCAGATAGAA  450

seq1  CCCTGAGAATATTTGACATTGTTTTTTTTTAAGAAGAGGCAGCTACCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGAATATTTGACATTGTTTTTTTTTAAGAAGAGGCAGCTACCACT  500

seq1  TGTTTTCATGATTGGTGTTCCCCAGCTACTTGATTCAAGACTGTCCTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCATGATTGGTGTTCCCCAGCTACTTGATTCAAGACTGTCCTACC  550

seq1  TGCTCTCTGATCTAGATGTAAAGGAGTGTTCCCCAGGTGGCAGGATTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTGATCTAGATGTAAAGGAGTGTTCCCCAGGTGGCAGGATTGTC  600

seq1  TGCTCCATCAGATAAAACAATAAACTGGAGAAGGTTTGAGAATGATCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCATCAGATAAAACAATAAACTGGAGAAGGTTTGAGAATGATCAAT  650

seq1  TATTCAGCCACTCTGCAAAACCTTTTAAAACCAAAGTCCAAAGACTAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGCCACTCTGCAAAACCTTTTAAAACCAAAGTCCAAAGACTAAAT  700

seq1  GAGATCAGGAAGAAGGCATTATTTTCAGGTCTTCAATTTCTTTTCTCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCAGGAAGAAGGCATTATTTTCAGGTCTTCAATTTCTTTTCTCAGC  750

seq1  ATGTTCTAGAGGCACAATGTAAACCAGAAACAATGGAGCAGGACCTATTC  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATGTTCTAGAGGCACAATGTAAACCAGAAACAATGGAGCA-GACCTATTC  799

seq1  TAATAGCCACTTCCTGATTTCATTTTCTTTACTCCAGTTAACAGACCTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCCACTTCCTGATTTCATTTTCTTTACTCCAGTTAACAGACCTTA  849

seq1  AATCCAGCCTGGGTATGGTATAATGTCTACAAATGAGAAAAGGAGGGGGA  900
      |||||||||| ||||||||||||||||||||||||||||||||| |||||
seq2  AATCCAGCCT-GGTATGGTATAATGTCTACAAATGAGAAAAGGA-GGGGA  897

seq1  CAATTTGGGGACTGGGTCTAAGGGTGGGACTGGGGGGGGGGGGAGA  946
      ||||||||||||||||||||||||| ||||||||||||||||| ||
seq2  CAATTTGGGGACTGGGTCTAAGGGT-GGACTGGGGGGGGGGGGGGA  942


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