BAC Information

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BAC

Clone NameB6Ng01-205J21
Chromosome16 (Build37)
Map Location 32,891,648 - 33,046,385
singlet/doubletdoublet
Overlap geneFyttd1, Lrch3, EG625660, Iqcg
Upstream geneMfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik
Downstream geneRpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8, 4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn, LOC100043670
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205J21.bB6Ng01-205J21.g
ACCGA025252GA025253
length838312
definitionB6Ng01-205J21.b B6Ng01-205J21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,045,558 - 33,046,385)(32,891,648 - 32,891,959)
sequence
gaattctttcctcacccagctcagcctccctaggatctgataccaagact
catgccaccatgctctctgtgtatttcagagtcgtgtttgatgagcatta
agcaacgatgctatacagatgaccgtatttatgaatatttatggataata
cctgtctttattctggagagaatttgggatgaaagaaaatgaaagagata
ggagttagctcagagtcaacaagcccagcagaaggccccaagttccatac
ctagtctagaaagaaaacagtgaaaaatagaaaagtgagagaaataaaag
caaatggaaaatttaaagtgaagccaggagctagagagatggcttaaaag
cactgactgcttttccagaggtcctgagttcaatttccagacaccacatg
gtggctctcctgtaatgggatcagatgcccttgctgatgtgtctgaagag
agagagcaacagtgtagtcatgtacataaaatgagtacataaatctttaa
agtgaggccaggtggtgatggtacacattatttaaaaccagcactcgaaa
agccattgcttcagcccctaaaacaatgtctttaacctttatttttagaa
agccagccacgaaggagcatctatgattacaaaccacaccgaaaaaattc
tacttcttttgttaactaaaagaaaaaatccatgatggcagaaaacaaac
agagagggcaggactttacccttttaaaaaacctacaaagcagaccatga
tgacttctggagacactgaagaaaattcagaatgacaggtaaagggcgag
gggggtctgggaaggtaaggatgtgccaagtaaggatg
acagaggtctgtgccttttaaatgttggaattaaagacatgtaccaccac
acctggctatcctaaggtttttatgaataagctttagagcgtattttgat
agatgtagggttttatttgtaagtgtgcgtccacacttgcgtgagtgcag
gtggccttggctgtcagattcccgctacctctgcaagaacatctagtcct
gttatttgcggagttgtctctagcctcttaccccctttaatatattagaa
attaatactctgtgtgcaggcacatagcacctagtgtgtgtgtgtgcgtg
tgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_33045558_33046385
seq2: B6Ng01-205J21.b_51_888 (reverse)

seq1  CATCCTTACCTTGCACATCCTTACCTTCCCAGA-CCCCCTCGCCC-TTAC  48
      ||||||||| | ||||||||||||||||||||| ||||||||||| ||||
seq2  CATCCTTACTTGGCACATCCTTACCTTCCCAGACCCCCCTCGCCCTTTAC  50

seq1  CTGTCATTCTGAATTTTCTTCAGTGTCTCCAG-AGTCATCATGGTCTGCT  97
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTGTCATTCTGAATTTTCTTCAGTGTCTCCAGAAGTCATCATGGTCTGCT  100

seq1  TTGTAGGTTTTTTAAA--GGTAAAGTCCTGCCCTCTCTGTTTGTTTTCTG  145
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  TTGTAGGTTTTTTAAAAGGGTAAAGTCCTGCCCTCTCTGTTTGTTTTCTG  150

seq1  CCATCATGGATTTTT--CTTTAGTTAAC-AAAGAAGTAG-ATTTTTTCGG  191
      |||||||||||||||   |||||||||| |||||||||| ||||||||||
seq2  CCATCATGGATTTTTTCTTTTAGTTAACAAAAGAAGTAGAATTTTTTCGG  200

seq1  TGTGG-TTGTAATCATAGATGCTCCTTCGTGGCTGGCTTTCTAAAAATAA  240
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTGTAATCATAGATGCTCCTTCGTGGCTGGCTTTCTAAAAATAA  250

seq1  AGGTTAAAGACATTGTTTTAGGGGCTGAAGCAATGGCTTTTCGAGTGCTG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAAGACATTGTTTTAGGGGCTGAAGCAATGGCTTTTCGAGTGCTG  300

seq1  GTTTTAAATAATGTGTACCATCACCACCTGGCCTCACTTTAAAGATTTAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAATAATGTGTACCATCACCACCTGGCCTCACTTTAAAGATTTAT  350

seq1  GTACTCATTTTATGTACATGACTACACTGTTGCTCTCTCTCTTCAGACAC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCATTTTATGTACATGACTACACTGTTGCTCTCTCTCTTCAGACAC  400

seq1  ATCAGCAAGGGCATCTGATCCCATTACAGGAGAGCCACCATGTGGTGTCT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAAGGGCATCTGATCCCATTACAGGAGAGCCACCATGTGGTGTCT  450

seq1  GGAAATTGAACTCAGGACCTCTGGAAAAGCAGTCAGTGCTTTTAAGCCAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGAACTCAGGACCTCTGGAAAAGCAGTCAGTGCTTTTAAGCCAT  500

seq1  CTCTCTAGCTCCTGGCTTCACTTTAAATTTTCCATTTGCTTTTATTTCTC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTAGCTCCTGGCTTCACTTTAAATTTTCCATTTGCTTTTATTTCTC  550

seq1  TCACTTTTCTATTTTTCACTGTTTTCTTTCTAGACTAGGTATGGAACTTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTCTATTTTTCACTGTTTTCTTTCTAGACTAGGTATGGAACTTG  600

seq1  GGGCCTTCTGCTGGGCTTGTTGACTCTGAGCTAACTCCTATCTCTTTCAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTCTGCTGGGCTTGTTGACTCTGAGCTAACTCCTATCTCTTTCAT  650

seq1  TTTCTTTCATCCCAAATTCTCTCCAGAATAAAGACAGGTATTATCCATAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCATCCCAAATTCTCTCCAGAATAAAGACAGGTATTATCCATAA  700

seq1  ATATTCATAAATACGGTCATCTGTATAGCATCGTTGCTTAATGCTCATCA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATAAATACGGTCATCTGTATAGCATCGTTGCTTAATGCTCATCA  750

seq1  AACACGACTCTGAAATACACAGAGAGCATGGTGGCATGAGTCTTGGTATC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGACTCTGAAATACACAGAGAGCATGGTGGCATGAGTCTTGGTATC  800

seq1  AGATCCTAGGGAGGCTGAGCTGGGTGAGGAAAGAATTC  828
      ||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTAGGGAGGCTGAGCTGGGTGAGGAAAGAATTC  838

seq1: chr16_32891648_32891959
seq2: B6Ng01-205J21.g_75_386

seq1  ACAGAGGTCTGTGCCTTTTAAATGTTGGAATTAAAGACATGTACCACCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGTCTGTGCCTTTTAAATGTTGGAATTAAAGACATGTACCACCAC  50

seq1  ACCTGGCTATCCTAAGGTTTTTATGAATAAGCTTTAGAGCGTATTTTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCTATCCTAAGGTTTTTATGAATAAGCTTTAGAGCGTATTTTGAT  100

seq1  AGATGTAGGGTTTTATTTGTAAGTGTGCGTCCACACTTGCGTGAGTGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAGGGTTTTATTTGTAAGTGTGCGTCCACACTTGCGTGAGTGCAG  150

seq1  GTGGCCTTGGCTGTCAGATTCCCGCTACCTCTGCAAGAACATCTAGTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTTGGCTGTCAGATTCCCGCTACCTCTGCAAGAACATCTAGTCCT  200

seq1  GTTATTTGCGGAGTTGTCTCTAGCCTCTTACCCCCTTTAATATATTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTGCGGAGTTGTCTCTAGCCTCTTACCCCCTTTAATATATTAGAA  250

seq1  ATTAATACTCTGTGTGCAGGCACATAGCACCTAGTGTGTGTGTGTGCGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATACTCTGTGTGCAGGCACATAGCACCTAGTGTGTGTGTGTGCGTG  300

seq1  TGTGTGTGTGTG  312
      ||||||||||||
seq2  TGTGTGTGTGTG  312