BAC Information

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BAC

Clone NameB6Ng01-206H07
Chromosome16 (Build37)
Map Location 70,476,455 - 70,634,379
singlet/doubletdoublet
Overlap geneGbe1, D16Ertd519e
Upstream geneSpeer2, EG664930
Downstream geneLOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206H07.bB6Ng01-206H07.g
ACCGA025865GA025866
length1,0781,091
definitionB6Ng01-206H07.b B6Ng01-206H07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,633,321 - 70,634,379)(70,476,455 - 70,477,543)
sequence
gaattctccttaatagggacggggtttcgttttcgctctctcttgcttct
tacactcttgctcctgaagatgtaagcaataaagttttgccgcagaagat
tctggtttgttgcgtctttcctggccggtcgtgagaacgcgtctaataac
agttggttggttagccagttgtctgattagttggttagttggttggttga
tggatttttcttcttcatttcatttatgaacagcaggtaggtatgcatgc
ctgttgttgtggatgctacattgtgtatgggtgctccaaaagacaagaat
ataggaccagatctcctagagctagagttatgggtagtagaagccacctt
atgtgagttcagggagatgaatgcaggtcctcaaaaagaccaataagagc
tctcaacctgtgagccatctctctagcacaggttttaatttcaggctagt
gcaaaaagaacaatagatatgatactcatgagataatgaaagaaaaaagt
gaaggataaagggaggaaggaagaaagagaggagaccggggtaaggggag
aagagagagatgattttaaaaagttatttattagtattgtctagtatgac
atgaagactctattacatagaggagttcttttttttttttaactgtagat
tcagtttgaattttctaagactcattttgcccatggcatcagattagcaa
tttcctatagaaaaatcaggaagtgaaagatgctcacacatttactaatt
aagatagattttgttacatagttatctaccatggaagacatctctttttg
tgaatttagaaataaatatcacaccaactacaaatatttgtgtcaacaat
attggacacccttacatccaagtagtgaaacaatcagctgtacagtaaat
cacaaccaaagttctgttttgttgatttattgtggaaataagtacccgtg
atagagatggtaaagcagaagtacgggaatcataattctttaaacaacag
caggtatgattaattgggaccaccttatgggtaaaggtggagaatattca
tgggtgttttccattcctcagagtggaa

gaattctgccttttaaaatatgatgatcttaaacaataggggctcgagag
atgatttaaagaggacctgagttaattgccagcactcctataaaacttga
tatagtgcatctgtaattctaaccctcccgaggcacagtttggaggactt
ccttggcttgtttgctcagtagtctagctagtcaggaaattccatgttca
gtgatacatcttatatgtcttagacttttttcggttgctataatgaaata
acaggaccagggaacttataaagaaagcatttaatttggggcttattatt
ctagagtgttagagtccatgaccaacaccgcaaagagtatggcagcaggc
aggcaggcatgatcctgaaagccatcgctgaaacttttatatctttgtca
caagcagacagcagacagacctagctgggaatgttgaatgctgtttttgt
tttagttttagttttttttaaagatttatttatttattatatgtaagtac
tctgtagctgtcttcagacactctagaagaggccatcagtctcattacgg
gtggttgggagccaccatgtggttgctgttatttgacctcaggaccttca
gaagagtcagtgcacttaactgctgagccatctctaagcctgcttccagt
gagacacctccccttaagaaagaccacacatctcagtctgtctcaaacca
tttcagcaactgaggactaagaattcaattatataagcctatagaggcca
ttcttactcaaatcaaaacgtggtcccaaaagttaagatggaacattaat
ttagaattacacattgtccatctgtgaattccattggattttacacacat
ggagcccatatgtgtatacactttcaccaaaataaatgaacatgggctgg
gataataaaatttgaaatttatctttatacacatttaatctaagcttctg
gaatgtccaggttgtccttcatgcacttatcatttgctcattcttcgggg
tttacctttccaaatattttttcaatacccagtaagtttttaaagttcaa
ggtaaacttatttcagtagaattgcatctgcaatcacctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70633321_70634379
seq2: B6Ng01-206H07.b_42_1119 (reverse)

seq1  TTCCACTCTGAG--ATGGAA---ACACATG-ATATTCT-CACCTTTTACC  43
      ||||||||||||  ||||||   || |||| ||||||| |||||||  ||
seq2  TTCCACTCTGAGGAATGGAAAACACCCATGAATATTCTCCACCTTTACCC  50

seq1  ATTAGGTG--TCCAATTAATC-TACCTGCTGTTGTTT-AAGAATTATGAT  89
      || |||||   |||||||||| ||||||||||||||| ||||||||||||
seq2  ATAAGGTGGTCCCAATTAATCATACCTGCTGTTGTTTAAAGAATTATGAT  100

seq1  TCCC-TACTTCTGCTTTACCATCTCTATCAC-GGTAC-TATTT-CACAAT  135
      |||| |||||||||||||||||||||||||| ||||| ||||| ||||||
seq2  TCCCGTACTTCTGCTTTACCATCTCTATCACGGGTACTTATTTCCACAAT  150

seq1  AAATCAACAAAACAG-ACTTTGGTTGTGA-TTACTGTACAGCTGATTGTT  183
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  AAATCAACAAAACAGAACTTTGGTTGTGATTTACTGTACAGCTGATTGTT  200

seq1  TCACTACTTGGATGTAA-GGTGT-CAATATTGTTGACACAAATATTTGTA  231
      ||||||||||||||||| ||||| ||||||||||||||||||||||||||
seq2  TCACTACTTGGATGTAAGGGTGTCCAATATTGTTGACACAAATATTTGTA  250

seq1  GTTGGTGTGATATTTATTTCTAAATTCACAAAAAGAGATGTCTTCCATGG  281
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGTGATATTTATTTCTAAATTCACAAAAAGAGATGTCTTCCATGG  300

seq1  TAGATAACTATGTAACAAAATCTATCTTAATTAGTAAATGTGTGAGCATC  331
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAACTATGTAACAAAATCTATCTTAATTAGTAAATGTGTGAGCATC  350

seq1  TTTCACTTCCTGATTTTTCTATAGGAAATTGCTAATCTGATGCCATGGGC  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTCCTGATTTTTCTATAGGAAATTGCTAATCTGATGCCATGGGC  400

seq1  AAAATGAGTCTTAGAAAATTCAAACTGAATCTACAGTTAAAAAAAAAAAA  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAGTCTTAGAAAATTCAAACTGAATCTACAGTTAAAAAAAAAAAA  450

seq1  GAACTCCTCTATGTAATAGAGTCTTCATGTCATACTAGACAATACTAATA  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCTCTATGTAATAGAGTCTTCATGTCATACTAGACAATACTAATA  500

seq1  AATAACTTTTTAAAATCATCTCTCTCTTCTCCCCTTACCCCGGTCTCCTC  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTTTTTAAAATCATCTCTCTCTTCTCCCCTTACCCCGGTCTCCTC  550

seq1  TCTTTCTTCCTTCCTCCCTTTATCCTTCACTTTTTTCTTTCATTATCTCA  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTCCTTCCTCCCTTTATCCTTCACTTTTTTCTTTCATTATCTCA  600

seq1  TGAGTATCATATCTATTGTTCTTTTTGCACTAGCCTGAAATTAAAACCTG  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATCATATCTATTGTTCTTTTTGCACTAGCCTGAAATTAAAACCTG  650

seq1  TGCTAGAGAGATGGCTCACAGGTTGAGAGCTCTTATTGGTCTTTTTGAGG  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAGAGATGGCTCACAGGTTGAGAGCTCTTATTGGTCTTTTTGAGG  700

seq1  ACCTGCATTCATCTCCCTGAACTCACATAAGGTGGCTTCTACTACCCATA  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCATTCATCTCCCTGAACTCACATAAGGTGGCTTCTACTACCCATA  750

seq1  ACTCTAGCTCTAGGAGATCTGGTCCTATATTCTTGTCTTTTGGAGCACCC  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGCTCTAGGAGATCTGGTCCTATATTCTTGTCTTTTGGAGCACCC  800

seq1  ATACACAATGTAGCATCCACAACAACAGGCATGCATACCTACCTGCTGTT  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAATGTAGCATCCACAACAACAGGCATGCATACCTACCTGCTGTT  850

seq1  CATAAATGAAATGAAGAAGAAAAATCCATCAACCAACCAACTAACCAACT  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATGAAATGAAGAAGAAAAATCCATCAACCAACCAACTAACCAACT  900

seq1  AATCAGACAACTGGCTAACCAACCAACTGTTATTAGACGCGTTCTCACGA  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGACAACTGGCTAACCAACCAACTGTTATTAGACGCGTTCTCACGA  950

seq1  CCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGCGGCAAAACTTTAT  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGCGGCAAAACTTTAT  1000

seq1  TGCTTACATCTTCAGGAGCAAGAGTGTAAGAAGCAAGAGAGAGCGAAAAC  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACATCTTCAGGAGCAAGAGTGTAAGAAGCAAGAGAGAGCGAAAAC  1050

seq1  GAAACCCCGTCCCTATTAAGGAGAATTC  1059
      ||||||||||||||||||||||||||||
seq2  GAAACCCCGTCCCTATTAAGGAGAATTC  1078


seq1: chr16_70476455_70477543
seq2: B6Ng01-206H07.g_68_1158

seq1  GAATTCTGCCTTTTAAAATATGATGATCTTAAACAATAGGGGCTCGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCTTTTAAAATATGATGATCTTAAACAATAGGGGCTCGAGAG  50

seq1  ATGATTTAAAGAGGACCTGAGTTAATTGCCAGCACTCCTATAAAACTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTAAAGAGGACCTGAGTTAATTGCCAGCACTCCTATAAAACTTGA  100

seq1  TATAGTGCATCTGTAATTCTAACCCTCCCGAGGCACAGTTTGGAGGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGCATCTGTAATTCTAACCCTCCCGAGGCACAGTTTGGAGGACTT  150

seq1  CCTTGGCTTGTTTGCTCAGTAGTCTAGCTAGTCAGGAAATTCCATGTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTTGTTTGCTCAGTAGTCTAGCTAGTCAGGAAATTCCATGTTCA  200

seq1  GTGATACATCTTATATGTCTTAGACTTTTTTCGGTTGCTATAATGAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATACATCTTATATGTCTTAGACTTTTTTCGGTTGCTATAATGAAATA  250

seq1  ACAGGACCAGGGAACTTATAAAGAAAGCATTTAATTTGGGGCTTATTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACCAGGGAACTTATAAAGAAAGCATTTAATTTGGGGCTTATTATT  300

seq1  CTAGAGTGTTAGAGTCCATGACCAACACCGCAAAGAGTATGGCAGCAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTGTTAGAGTCCATGACCAACACCGCAAAGAGTATGGCAGCAGGC  350

seq1  AGGCAGGCATGATCCTGAAAGCCATCGCTGAAACTTTTATATCTTTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCATGATCCTGAAAGCCATCGCTGAAACTTTTATATCTTTGTCA  400

seq1  CAAGCAGACAGCAGACAGACCTAGCTGGGAATGTTGAATGCTGTTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGACAGCAGACAGACCTAGCTGGGAATGTTGAATGCTGTTTTTGT  450

seq1  TTTAGTTTTAGTTTTTTTTAAAGATTTATTTATTTATTATATGTAAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTTAGTTTTTTTTAAAGATTTATTTATTTATTATATGTAAGTAC  500

seq1  TCTGTAGCTGTCTTCAGACACTCTAGAAGAGGCCATCAGTCTCATTACGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGCTGTCTTCAGACACTCTAGAAGAGGCCATCAGTCTCATTACGG  550

seq1  GTGGTTGGGAGCCACCATGTGGTTGCTGTTATTTGACCTCAGGACCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGGGAGCCACCATGTGGTTGCTGTTATTTGACCTCAGGACCTTCA  600

seq1  GAAGAGTCAGTGCACTTAACTGCTGAGCCATCTCTAAGCCTGCTTCCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTCAGTGCACTTAACTGCTGAGCCATCTCTAAGCCTGCTTCCAGT  650

seq1  GAGACACCTCCCCTTAAG-AAGACCACACATCTCAGTCTGTCTCAAACCA  699
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAGACACCTCCCCTTAAGAAAGACCACACATCTCAGTCTGTCTCAAACCA  700

seq1  TTTCAGCAACTGAGGACTAAGAATTCAATTATATAAGCCTATAGAGGCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCAACTGAGGACTAAGAATTCAATTATATAAGCCTATAGAGGCCA  750

seq1  TTCTTACTCAAATCAAAACGTGGTCCCAAAAGTTAAGATGGAACATTAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACTCAAATCAAAACGTGGTCCCAAAAGTTAAGATGGAACATTAAT  800

seq1  TTAGAATTACACATTGTCCATCTGTGAATTCCATTTGGATTTACACACAT  849
      ||||||||||||||||||||||||||||||||||| |  |||||||||||
seq2  TTAGAATTACACATTGTCCATCTGTGAATTCCATTGGATTTTACACACAT  850

seq1  GGAGCCCATATGTGTATACACTTTCA-CAAAATAAATGAACAT-GGCTGG  897
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  GGAGCCCATATGTGTATACACTTTCACCAAAATAAATGAACATGGGCTGG  900

seq1  GATAATAAAATTTGAAATTTATCTTTATACACATTTAATCTAAGCTTCTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GATAATAAAATTTGAAATTTATCTTTATACACATTTAATCTAAGCTTCTG  950

seq1  GAATGTCCAGGTTGTCCTTCATGCACTTATCA-TTGCTCATTCTTCGGGG  996
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAATGTCCAGGTTGTCCTTCATGCACTTATCATTTGCTCATTCTTCGGGG  1000

seq1  TTTACCTTTCCAAATATTTTTCAAATACCCAGTAAGTTTTTAAAGTTCAA  1046
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  TTTACCTTTCCAAATATTTTTTCAATACCCAGTAAGTTTTTAAAGTTCAA  1050

seq1  GGT-AACTTATTTCAAGTAGGTATTGTCATCTGCATTCACCTCT  1089
      ||| |||||||||| |||| | |||| |||||||| ||||||||
seq2  GGTAAACTTATTTC-AGTA-GAATTG-CATCTGCAATCACCTCT  1091


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