BAC Information

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BAC

Clone NameB6Ng01-207F05
Chromosome16 (Build37)
Map Location 50,525,066 - 50,679,099
singlet/doubletdoublet
Overlap geneCcdc54, LOC672778
Upstream geneIft57, LOC667796, LOC100043767, Cd47, EG433024, LOC100043769, LOC628951, EG224180, EG667802, LOC100043404, Bbx, LOC100043414
Downstream gene5330426P16Rik, EG639820, LOC627543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207F05.bB6Ng01-207F05.g
ACCGA026512GA026513
length982948
definitionB6Ng01-207F05.b B6Ng01-207F05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,678,396 - 50,679,099)(50,525,066 - 50,526,009)
sequence
gaattccaaagtgattgacaaaaagcaccaagaactaataggtgcatttt
gtaatgtcttgagaattgttgttaacacaacaaaatcaatcatttctaca
tgcttgccatgaatagttggaaactgaaacagtttggtttttgttttttt
ttttttttttttaagaaatgtagctcctgtggagtgaaatgttcagacat
aaatataacaaatatctgctgaaagaagtcatctcagaatgctcggagac
actgtgttcttagattagacgatttggcataataaaagtgtcaattcaaa
tgtatttccaaccaaaatcccacagggctttgcacgcacatacagtacaa
actgattctaaactttgcagggggcctgcaagatggatcagaaggtgaaa
agcacatgccatgcaattctaaaacaagattcaatcccagaatcctcaaa
aagctggatgctgcagctcagatctataacctcggccctcctcctgggag
attgaaggtggaaacaggacaatccctgggaagcttttattcagtgagtc
tggaatacacagagcagcagagtcaaatgagaccctactgcagcaagatg
gcaagccatgacccccacacacacacacatgtgcaccacactctcacaca
tgcacaagaataataataaaaaaaatgaaaatgtaagtggatgaggaaaa
caaaggaaccacgatagtccagacaatctttgaaagagcagaaaagctgg
aggagatttagaaatttgatgaagctattataatcaaagcagcatgctac
tgataaaaaatatctagagaaaaatcaactgaatgaaatagggaagacag
gagaaacccacacagacccaactgattgataattcttttacaatgagtag
ttattcaatgaaaatacctttcttggagatatttcgttgggaatactcaa
tacataacaacggggaaaatttggaaatctat
gaattctctgagggacataggtaggccttggaaaagaattcacgcttagg
tgttgatgtgtcaggcgggctttgctgtaacaggcactgcgcaacaccag
gccgaggataaagtcacacagggaacatggagtaggggccagtgttacat
gcagcctgttaagtgtttatcgaactttcgcggagagtgctgagaggtgt
atcctgaagattttctttttcttagtctgaggaagagttttatctcggct
ggttgatgcagaatcagccatggttttgtttgtttgttgtctgtcgaggc
aggttaactccgtgtagtcctggctgtcctgtaactcactttgtaaatct
gtcctgtaaaccaggctggcctcatatttagagatctgcctgagtctgcc
tcccaagtgctgggcccaaagccgtgagcagccactgcatgggtctgcaa
atggttttaataaagaaaatgatgtattagttattgagaaagggcagcat
tcttctggggtttgtccagactgtcaacatctttatatccaagagaaagt
gagaaaaaagagtgaggagaagtaggaatgcggtgagcaggctgtttagt
ggtcggcactcagtgcttagggctgaagaggggatactgccacttcagtt
cattcttgtttttattttatgtgtatgagtgctttgcctgactgtatgta
tgcgtaccctacgcatgcccaatacccacatcgaacaaaagaggacgtca
gatccctttggaacctgagttacagatggtagtgagccacccatgtgggt
gctgggaacccaccccacgttctctgctagagctacaagtacttttaacc
attgagccatctcgccagcttttttgtttgtttgtttgtttttggtttga
tgctgtaacctagaatttgtacttgtctccgagatgcctattcccagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_50678396_50679099
seq2: B6Ng01-207F05.b_41_744 (reverse)

seq1  TTTGTTTTCCTCATCCACTTACATTTTCATTTTTTTTATTATTATTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTCCTCATCCACTTACATTTTCATTTTTTTTATTATTATTCTTG  50

seq1  TGCATGTGTGAGAGTGTGGTGCACATGTGTGTGTGTGTGGGGGTCATGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTGAGAGTGTGGTGCACATGTGTGTGTGTGTGGGGGTCATGGC  100

seq1  TTGCCATCTTGCTGCAGTAGGGTCTCATTTGACTCTGCTGCTCTGTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATCTTGCTGCAGTAGGGTCTCATTTGACTCTGCTGCTCTGTGTAT  150

seq1  TCCAGACTCACTGAATAAAAGCTTCCCAGGGATTGTCCTGTTTCCACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACTCACTGAATAAAAGCTTCCCAGGGATTGTCCTGTTTCCACCTT  200

seq1  CAATCTCCCAGGAGGAGGGCCGAGGTTATAGATCTGAGCTGCAGCATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCCCAGGAGGAGGGCCGAGGTTATAGATCTGAGCTGCAGCATCCA  250

seq1  GCTTTTTGAGGATTCTGGGATTGAATCTTGTTTTAGAATTGCATGGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTGAGGATTCTGGGATTGAATCTTGTTTTAGAATTGCATGGCATG  300

seq1  TGCTTTTCACCTTCTGATCCATCTTGCAGGCCCCCTGCAAAGTTTAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCACCTTCTGATCCATCTTGCAGGCCCCCTGCAAAGTTTAGAAT  350

seq1  CAGTTTGTACTGTATGTGCGTGCAAAGCCCTGTGGGATTTTGGTTGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGTACTGTATGTGCGTGCAAAGCCCTGTGGGATTTTGGTTGGAAA  400

seq1  TACATTTGAATTGACACTTTTATTATGCCAAATCGTCTAATCTAAGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGAATTGACACTTTTATTATGCCAAATCGTCTAATCTAAGAACA  450

seq1  CAGTGTCTCCGAGCATTCTGAGATGACTTCTTTCAGCAGATATTTGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTCCGAGCATTCTGAGATGACTTCTTTCAGCAGATATTTGTTAT  500

seq1  ATTTATGTCTGAACATTTCACTCCACAGGAGCTACATTTCTTAAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTCTGAACATTTCACTCCACAGGAGCTACATTTCTTAAAAAAAA  550

seq1  AAAAAAAAAAACAAAAACCAAACTGTTTCAGTTTCCAACTATTCATGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAACAAAAACCAAACTGTTTCAGTTTCCAACTATTCATGGCA  600

seq1  AGCATGTAGAAATGATTGATTTTGTTGTGTTAACAACAATTCTCAAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTAGAAATGATTGATTTTGTTGTGTTAACAACAATTCTCAAGACA  650

seq1  TTACAAAATGCACCTATTAGTTCTTGGTGCTTTTTGTCAATCACTTTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAATGCACCTATTAGTTCTTGGTGCTTTTTGTCAATCACTTTGGA  700

seq1  ATTC  704
      ||||
seq2  ATTC  704

seq1: chr16_50525066_50526009
seq2: B6Ng01-207F05.g_65_1012

seq1  GAATTCTCTGAGGGACATAGGTAGGCCTTGGAAAAGAATTCACGCTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGAGGGACATAGGTAGGCCTTGGAAAAGAATTCACGCTTAGG  50

seq1  TGTTGATGTGTCAGGCGGGCTTTGCTGTAACAGGCACTGCGCAACACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATGTGTCAGGCGGGCTTTGCTGTAACAGGCACTGCGCAACACCAG  100

seq1  GCCGAGGATAAAGTCACACAGGGAACATGGAGTAGGGGCCAGTGTTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGGATAAAGTCACACAGGGAACATGGAGTAGGGGCCAGTGTTACAT  150

seq1  GCAGCCTGTTAAGTGTTTATCGAACTTTCGCGGAGAGTGCTGAGAGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTGTTAAGTGTTTATCGAACTTTCGCGGAGAGTGCTGAGAGGTGT  200

seq1  ATCCTGAAGATTTTCTTTTTCTTAGTCTGAGGAAGAGTTTTATCTCGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAAGATTTTCTTTTTCTTAGTCTGAGGAAGAGTTTTATCTCGGCT  250

seq1  GGTTGATGCAGAATCAGCCATGGTTTTGTTTGTTTGTTGTCTGTCGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATGCAGAATCAGCCATGGTTTTGTTTGTTTGTTGTCTGTCGAGGC  300

seq1  AGGTTAACTCCGTGTAGTCCTGGCTGTCCTGTAACTCACTTTGTAAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAACTCCGTGTAGTCCTGGCTGTCCTGTAACTCACTTTGTAAATCT  350

seq1  GTCCTGTAAACCAGGCTGGCCTCATATTTAGAGATCTGCCTGAGTCTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTAAACCAGGCTGGCCTCATATTTAGAGATCTGCCTGAGTCTGCC  400

seq1  TCCCAAGTGCTGGGCCCAAAGCCGTGAGCAGCCACTGCATGGGTCTGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGTGCTGGGCCCAAAGCCGTGAGCAGCCACTGCATGGGTCTGCAA  450

seq1  ATGGTTTTAATAAAGAAAATGATGTATTAGTTATTGAGAAAGGGCAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTAATAAAGAAAATGATGTATTAGTTATTGAGAAAGGGCAGCAT  500

seq1  TCTTCTGGGGTTTGTCCAGACTGTCAACATCTTTATATCCAAGAGAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGGGTTTGTCCAGACTGTCAACATCTTTATATCCAAGAGAAAGT  550

seq1  GAGAAAAAAGAGTGAGGAGAAGTAGGAATGCGGTGAGCAGGCTGTTTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAAAGAGTGAGGAGAAGTAGGAATGCGGTGAGCAGGCTGTTTAGT  600

seq1  GGTCGGCACTCAGTGCTTAGGGCTGAAGAGGGGATACTGCCACTTCAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGGCACTCAGTGCTTAGGGCTGAAGAGGGGATACTGCCACTTCAGTT  650

seq1  CATTCTTGTTTTTATTTTATGTGTATGAGTGCTTTGCCTGACTGTATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTGTTTTTATTTTATGTGTATGAGTGCTTTGCCTGACTGTATGTA  700

seq1  TGCGTACCCTACGCATGCCCAATACCCACATCGAACAAAAGAGGACGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTACCCTACGCATGCCCAATACCCACATCGAACAAAAGAGGACGTCA  750

seq1  GATCCC-TTGGAACCTGAGTTACAGATGGTAGTGAGCCA-CCATGTGGGT  798
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  GATCCCTTTGGAACCTGAGTTACAGATGGTAGTGAGCCACCCATGTGGGT  800

seq1  GCTGGGAACCCACCCCACGTTCTCTGCAAGAGCAACAAGTACTTTTAACC  848
      ||||||||||||||||||||||||||| ||||| ||||||||||||||||
seq2  GCTGGGAACCCACCCCACGTTCTCTGCTAGAGCTACAAGTACTTTTAACC  850

seq1  ATTGAGCCATCTCGCCAGCTTTTTTGTTTGTTTGTTTGTTTTTGTTTTGA  898
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTGAGCCATCTCGCCAGCTTTTTTGTTTGTTTGTTTGTTTTTGGTTTGA  900

seq1  TGCTGTAACCTAGAA-CTGTAC-TGTCTCCGAGATGCCAATTCCCAGT  944
      |||||||||||||||  ||||| ||||||||||||||| |||||||||
seq2  TGCTGTAACCTAGAATTTGTACTTGTCTCCGAGATGCCTATTCCCAGT  948