BAC Information

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BAC

Clone NameB6Ng01-207I23
Chromosome16 (Build37)
Map Location 32,043,073 - 32,168,474
singlet/doubletdoublet
Overlap genePak2, Pigx, 1500031L02Rik, Lrrc33
Upstream geneAI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5
Downstream geneBex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207I23.bB6Ng01-207I23.g
ACCGA026673GA026674
length1,1111,091
definitionB6Ng01-207I23.b B6Ng01-207I23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,167,365 - 32,168,474)(32,043,073 - 32,044,170)
sequence
gaattctggctggacactctggctttcagacctgctggtgtgaggaatgt
cctgttttcagctttgccctagtttctcctggaagtctttgggtccttct
gctgctactatagaagaacaatctgtgccattttccagccaactacagcc
ttgtttctccacagcctttaaaatggccagcttctaagtttccttgaaag
aaatcttgccgagaatgctaatgggtaaagcatatacaagtaggtatatg
ctactgggtgtggtgataaatatgtgaagcacttgggaagtggaggcagg
gggatcaaggcagggccaactaaatgagactctgtccaaaaaaaaaaaaa
aaaaaaaaaaaaaaagcaaagaggaagaaaagtggatgaggatgttagaa
ctcaggcattgttgattcttaaactggctgaaccaggatttaaacactgg
cccaggtaaacagggacaatggctggccataaaggccctaagcaaggaac
gaattgatccccacactttttctcgaatgatcgatccatggaagatgggt
ggagtctaacttggaagatggacaagatttgggacaggtagacaactaag
gaagttactgaagtcatccagacatgagttggtgagagctagacacttgg
aagaaggaagaaggcttataagatgcaggaagtaaacaaaagcaacccag
gaagctcctgaaacatgcaagattcataagactctcttccccaagcccat
aacacagtaatctatagagagaatctagtggggagccacctgtgggtgta
ggagtctctgggagtgcagttttgtgagttgtcattcatgctagggtagg
tttcttggtgaatcactgtgttcctataagtaaccccaggaaactcaccg
gctctctaagctagatttgggtggaattggttctttgatctgtcatcaat
gccttgtgtggtgaataactgtaagatcctcccccagaaaagtccactac
aacaatcagattcaagaatcatcctaggacagaggacataacctcaatgg
gctaaagccactcatgtctctccagaagaacctgagatcctctcccagcc
atgatgggtgg
gaattcctttggtgatgaacagcagtatggaagtgtaagccaaataaacc
ctttcctccccaacttgcttcttggtcatgatgtttgtgcaggaatagaa
accctgactaagacagcaacctaaatcagaatgcaaattataataaatta
ttaacttactgctggtgttccagaagggaagccatctttctctgaatgtg
aaacagaaaagatatgtattaccaaactgagaaagaaaagtgaactggga
aatcacacacacacacacacaagcagacagggttttgctatgtagcccta
gctgacctgatatttgctatacagtccctgctagttgttgtttctccccc
tacccccatccctattttagattttatttattgcatgtataaggttgggc
gtatccttggctgctgtggagctagaaatacagaccagtatggctttgaa
cacacagagctctgtctacctcagcctgctgagtgatgggattaaggtgt
tttccaaaacgccggatggatggcaaagcactgtcctgtcagagctgatt
tatgtcacaaagtcacttccactacagcctactcacaacaaccatctcaa
gcatgaccttgtctatacatttagacgctttgccttccattgctggaagt
catttaaaagcatcatagaggaaaaggttaaataagcaaagagctcaaac
atccaccaactctatttctggcaaaatgataaggtttatataatcaccag
acatcaacactctctaaagggcagatttatgcaggagagaaggagcgaca
acagctatacttccattgttgattgtcccagaaggaatcttttctcacca
ccgtctggggtcttaccaggaggagtgaaactcaggtacttctgtttcac
agtgttggagtcgtagaacttcaagacatccagcactgcctggagggttc
ttctttctgctcgagtttggtaatgtggaggtctgcacagccgcgcccca
ctgttctggcatgcctaccaaagaaacccataatgagttatgggttaatg
ctcgaataaaacattcacagacaatgacatgcctgcacagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32167365_32168474
seq2: B6Ng01-207I23.b_46_1156 (reverse)

seq1  CCACCACATCATGGCTGGGAGA-GAACTCAGGGTCTTCTGAGAGA-ACAC  48
      ||||| |||||||||||||||| || |||||| ||||||| |||| ||| 
seq2  CCACC-CATCATGGCTGGGAGAGGATCTCAGGTTCTTCTG-GAGAGACA-  47

seq1  TGAGT-GCTTTTAACCATTGA-GTTATGTCTTCTGTCCTAGGAATGGTTC  96
      ||||| |||||   ||||||| |||||||| ||||||||||| ||| |||
seq2  TGAGTGGCTTTAGCCCATTGAGGTTATGTCCTCTGTCCTAGG-ATGATTC  96

seq1  TTGAATCTGATTGTTGT-GT-GACTTTTCTTGGGGA-GATCTTAACAGTT  143
      ||||||||||||||||| || ||||||||| ||||| |||||| ||||||
seq2  TTGAATCTGATTGTTGTAGTGGACTTTTCTGGGGGAGGATCTT-ACAGTT  145

seq1  ATTCACCACAACAAGGCATTGATGACAGATCAAAGAACCAATTCCACCCA  193
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACCAC-ACAAGGCATTGATGACAGATCAAAGAACCAATTCCACCCA  194

seq1  AATCTAGCTTAGAGAGCCGGTGAGTTTCCTGGGGTTACTTATAGGAACAC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAGCTTAGAGAGCCGGTGAGTTTCCTGGGGTTACTTATAGGAACAC  244

seq1  AGTGATTCACCAAGAAACCTACCCTAGCATGAATGACAACTCACAAAACT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTCACCAAGAAACCTACCCTAGCATGAATGACAACTCACAAAACT  294

seq1  GCACTCCCAGAGACTCCTACACCCACAGGTGGCTCCCCACTAGATTCTCT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCCCAGAGACTCCTACACCCACAGGTGGCTCCCCACTAGATTCTCT  344

seq1  CTATAGATTACTGTGTTATGGGCTTGGGGAAGAGAGTCTTATGAATCTTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGATTACTGTGTTATGGGCTTGGGGAAGAGAGTCTTATGAATCTTG  394

seq1  CATGTTTCAGGAGCTTCCTGGGTTGCTTTTGTTTACTTCCTGCATCTTAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCAGGAGCTTCCTGGGTTGCTTTTGTTTACTTCCTGCATCTTAT  444

seq1  AAGCCTTCTTCCTTCTTCCAAGTGTCTAGCTCTCACCAACTCATGTCTGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTCTTCCTTCTTCCAAGTGTCTAGCTCTCACCAACTCATGTCTGG  494

seq1  ATGACTTCAGTAACTTCCTTAGTTGTCTACCTGTCCCAAATCTTGTCCAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTCAGTAACTTCCTTAGTTGTCTACCTGTCCCAAATCTTGTCCAT  544

seq1  CTTCCAAGTTAGACTCCACCCATCTTCCATGGATCGATCATTCGAGAAAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAGTTAGACTCCACCCATCTTCCATGGATCGATCATTCGAGAAAA  594

seq1  AGTGTGGGGATCAATTCGTTCCTTGCTTAGGGCCTTTATGGCCAGCCATT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGGGATCAATTCGTTCCTTGCTTAGGGCCTTTATGGCCAGCCATT  644

seq1  GTCCCTGTTTACCTGGGCCAGTGTTTAAATCCTGGTTCAGCCAGTTTAAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGTTTACCTGGGCCAGTGTTTAAATCCTGGTTCAGCCAGTTTAAG  694

seq1  AATCAACAATGCCTGAGTTCTAACATCCTCATCCACTTTTCTTCCTCTTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACAATGCCTGAGTTCTAACATCCTCATCCACTTTTCTTCCTCTTT  744

seq1  GCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGACAGAGTCTCATTTAGTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGACAGAGTCTCATTTAGTT  794

seq1  GGCCCTGCCTTGATCCCCCTGCCTCCACTTCCCAAGTGCTTCACATATTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGCCTTGATCCCCCTGCCTCCACTTCCCAAGTGCTTCACATATTT  844

seq1  ATCACCACACCCAGTAGCATATACCTACTTGTATATGCTTTACCCATTAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCACACCCAGTAGCATATACCTACTTGTATATGCTTTACCCATTAG  894

seq1  CATTCTCGGCAAGATTTCTTTCAAGGAAACTTAGAAGCTGGCCATTTTAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCGGCAAGATTTCTTTCAAGGAAACTTAGAAGCTGGCCATTTTAA  944

seq1  AGGCTGTGGAGAAACAAGGCTGTAGTTGGCTGGAAAATGGCACAGATTGT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTGGAGAAACAAGGCTGTAGTTGGCTGGAAAATGGCACAGATTGT  994

seq1  TCTTCTATAGTAGCAGCAGAAGGACCCAAAGACTTCCAGGAGAAACTAGG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTATAGTAGCAGCAGAAGGACCCAAAGACTTCCAGGAGAAACTAGG  1044

seq1  GCAAAGCTGAAAACAGGACATTCCTCACACCAGCAGGTCTGAAAGCCAGA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCTGAAAACAGGACATTCCTCACACCAGCAGGTCTGAAAGCCAGA  1094

seq1  GTGTCCAGCCAGAATTC  1110
      |||||||||||||||||
seq2  GTGTCCAGCCAGAATTC  1111

seq1: chr16_32043073_32044170
seq2: B6Ng01-207I23.g_64_1154

seq1  GAATTCCTTTGGTGATGAACAGCAGTATGGAAGTGTAAGCCAAATAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGGTGATGAACAGCAGTATGGAAGTGTAAGCCAAATAAACC  50

seq1  CTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAA  100

seq1  ACCCTGACTAAGACAGCAACCTAAATCAGAATGCAAATTATAATAAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGACTAAGACAGCAACCTAAATCAGAATGCAAATTATAATAAATTA  150

seq1  TTAACTTACTGCTGGTGTTCCAGAAGGGAAGCCATCTTTCTCTGAATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTACTGCTGGTGTTCCAGAAGGGAAGCCATCTTTCTCTGAATGTG  200

seq1  AAACAGAAAAGATATGTATTACCAAACTGAGAAAGAAAAGTGAACTGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAAAGATATGTATTACCAAACTGAGAAAGAAAAGTGAACTGGGA  250

seq1  AATCACACACACACACACACAAGCAGACAGGGTTTTGCTATGTAGCCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACACACACACACACACAAGCAGACAGGGTTTTGCTATGTAGCCCTA  300

seq1  GCTGACCTGATATTTGCTATACAGTCCCTGCTAGTTGTTGTTTCTCCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCTGATATTTGCTATACAGTCCCTGCTAGTTGTTGTTTCTCCCCC  350

seq1  TACCCCCATCCCTATTTTAGATTTTATTTATTGCATGTATAAGGTTGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCATCCCTATTTTAGATTTTATTTATTGCATGTATAAGGTTGGGC  400

seq1  GTATCCTTGGCTGCTGTGGAGCTAGAAATACAGACCAGTATGGCTTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTTGGCTGCTGTGGAGCTAGAAATACAGACCAGTATGGCTTTGAA  450

seq1  CACACAGAGCTCTGTCTACCTCAGCCTGCTGAGTGATGGGATTAAGGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAGCTCTGTCTACCTCAGCCTGCTGAGTGATGGGATTAAGGTGT  500

seq1  TTTCCAAAACGCCGGATGGATGGCAAAGCACTGTCCTGTCAGAGCTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAACGCCGGATGGATGGCAAAGCACTGTCCTGTCAGAGCTGATT  550

seq1  TATGTCACAAAGTCACTTCCACTACAGCCTACTCACAACAACCATCTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACAAAGTCACTTCCACTACAGCCTACTCACAACAACCATCTCAA  600

seq1  GCATGACCTTGTCTATACATTTAGACGCTTTGCCTTCCATTGCTGGAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACCTTGTCTATACATTTAGACGCTTTGCCTTCCATTGCTGGAAGT  650

seq1  CATTTAAAAGCATCATAGAGGAAAAGGTTAAATAAGCAAAGAGCTCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAAGCATCATAGAGGAAAAGGTTAAATAAGCAAAGAGCTCAAAC  700

seq1  ATCCACCAACTCTATTTCTGGCAAAATGATAAGGTTTATATAATCACCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCAACTCTATTTCTGGCAAAATGATAAGGTTTATATAATCACCAG  750

seq1  ACATCAACACTCTCTAAAGGGCAGATTTATGCAGGAGAGAAGGAGCGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAACACTCTCTAAAGGGCAGATTTATGCAGGAGAGAAGGAGCGACA  800

seq1  ACAGCTATACTTCCATTGTTGATTGTCCCAGAAGGAATCTTTTCTCACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTATACTTCCATTGTTGATTGTCCCAGAAGGAATCTTTTCTCACCA  850

seq1  CCGTCTGGGGTCTTACCAGGAGGAGTGAAACTCAGGTACTTCTGTTTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTGGGGTCTTACCAGGAGGAGTGAAACTCAGGTACTTCTGTTTCAC  900

seq1  AGTGTTGGAGTCGTAGAACTTCAAGACATCCAGCACTGCCT-GAGGGTTC  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGTGTTGGAGTCGTAGAACTTCAAGACATCCAGCACTGCCTGGAGGGTTC  950

seq1  TTC-TTCTGCTCGAGTTTGGTAATGTTGGAGGTCTGCAACAGCCGCG-CC  997
      ||| ||||||||||||||||||||| ||||||||||| ||||||||| ||
seq2  TTCTTTCTGCTCGAGTTTGGTAATG-TGGAGGTCTGC-ACAGCCGCGCCC  998

seq1  CACTGTTCTGGCATGCCCTAACCAAAAGAAACCCATAAATGAGTTATGGT  1047
      ||||||||||||||| ||||  | |||||||||||| |||||||||||| 
seq2  CACTGTTCTGGCATG-CCTA--CCAAAGAAACCCAT-AATGAGTTATGGG  1044

seq1  TTAATGCTCGAATAAAAACATTTCACAGACCAATGACAATGCCTGCACAG  1097
      ||||||||||||| |||||| |||||||| ||||||| ||||||||||||
seq2  TTAATGCTCGAAT-AAAACA-TTCACAGA-CAATGAC-ATGCCTGCACAG  1090

seq1  C  1098
      |
seq2  C  1091