BAC Information

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BAC

Clone NameB6Ng01-207N11
Chromosome16 (Build37)
Map Location 87,575,346 - 87,702,170
singlet/doubletdoublet
Overlap geneORF63, Bach1
Upstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486
Downstream geneLOC100039901, Grik1, EG622373, Cldn17, Cldn8, Gm312, 2310079G19Rik, 2310002B14Rik, EG665513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207N11.bB6Ng01-207N11.g
ACCGA026882GA026883
length1,130949
definitionB6Ng01-207N11.b B6Ng01-207N11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,701,036 - 87,702,170)(87,575,346 - 87,576,290)
sequence
gaattccacttcccaaggattatttaaatgcagttttaacaataatcaca
aggatataaaaagggggaacccttagccgggcgtggtggcgcacgccttt
aatcccagcactcaggaggcagaggcaggcggatttctgagttcgaggcc
agcctggtctacaaagtgagttccaggacagccagggctatacagagaaa
ccctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaaacaaaacaa
aaacaaaaaaaggggggacccacaaacttccaaagggtaagagaatttta
ccttaaattttaaaagattttgttatgaatattacattccaaatgtataa
attatcaaaccttctaatcactacacacattcaaccaaccacctttgggg
cttgcctacaaatccaataaaatgttatcaaaatagaactatgtaatttt
tttatttctatcactcactttaagaatgtagtaagaaattcccatctttt
attctttacaatataaaaactacatatgaagtgaaagtcaaatactaaga
atattttgaaattactacagctctcggaaaagatcagaaattaaacacac
acagaaatctgttgcagacttggaatgatggcaatagcagtggaaagtaa
attttatattcctcaacagaaaaaaggataaagtgtgcataaccacatta
tctagtatgcaaatattgatgtcaccctcctcgtttaacttcctgatgtg
gatattttcatgttagatcaagcatcctgtaatctacctgaaatctccta
acatctgaaagagacaacactgataaccctaaatctaaaacagcacacca
accgctcccctgctacagaggtttgaaaggaatgaccatcaataataatt
tggtatcgttcttgcgcccatgcaacccttgagagggtaaaggcactccg
caccaagcttgacggcctgaggtccaggcccagaacccacaggattaacg
gagaagaaccacaaatgcaaactgtcctctgatctctgcacaaatacaaa
cacaaaacaattaaattaaatacatgttttaaaatcattcgtccttagtt
caggcagtaagagtcaggttctcttcatac
gaattcttgaattacatagctctttttatagtctcaggagcaacagaaaa
gacacaaatgtgttttagtccaagccttacaatatgtaagttacacagtg
taaattccagcacttactggcactgcactcagtgtatgcgttaaagaact
gtcagttactgcatatcttcaaatccttaaagtcctaaagtagtaaaaaa
ttgaatggccataattgaatgaactctagatcttcctttcgtcgacctag
actagttttctcctctttgtttcagtagactgtgcttgttaattttgaga
gacattaccatggaggggtaacctctgttcccctaccaagtaggtaatcc
tgagaatcaaggagtaaatacaagctcctcccaaccaccatagaatgttt
gccttcctaaatatatcttctgtgtgggaagctggggtaggagaatttaa
ttcttgcgggttttttttttttttttttgaagtggacaggaccactagtt
tctgaagtagccaagcagaaaacggaaacgcttaagcaggctcggcccct
tgctgaggtgtgcttggcagcgtgctttctcatgggctcccttccaaagg
atgggctacacttctggaggctgtgaactgatgactgagatggcgcgcag
tggatcaagccacaatcttggaccgggagcttgcggtttggtttctctct
tacttcacttctactaaattagtcctggtgattgggcaggatcccagggg
ctgtaagggctctgcgtgtaacttaaaacctttgcaagctctatcctctc
aggaaatggggtgaagaggaagtcactaccctggcttctgacctcatcca
agccccagtcttgtgccctggaaactgtgtcttcatagttggctcgaaag
ggaggctgcaggaccatctttatttactcccccttttggactccagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_87701036_87702170
seq2: B6Ng01-207N11.b_54_1183 (reverse)

seq1  GTATGAAGAGAACTGGCTTCTTCTTCCCTTTGACTAAAAGAACG-ATGAT  49
      |||||||||||||  |  ||||  | || |  |||  ||| ||| |||||
seq2  GTATGAAGAGAACCTGACTCTTACTGCC-TGAACT--AAGGACGAATGAT  47

seq1  TTTTAAAAACATGTATTT-ATTTTATTGTTTTGTGTTTGTATTTGTGCAG  98
      |||  ||||||||||||| |||| ||||||||||||||||||||||||||
seq2  TTT--AAAACATGTATTTAATTTAATTGTTTTGTGTTTGTATTTGTGCAG  95

seq1  AGATCAGAGGACAGTTTGCATTTGTGGTTC-TCTCCGTTAATCCTGTGGG  147
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGATCAGAGGACAGTTTGCATTTGTGGTTCTTCTCCGTTAATCCTGTGGG  145

seq1  TTCTGGGGCCTGGACCTCAGGCCGTCAAGCTTGGTGGCGAGTGCCTTTAC  197
      |||| |||||||||||||||||||||||||||||||  ||||||||||||
seq2  TTCT-GGGCCTGGACCTCAGGCCGTCAAGCTTGGTGCGGAGTGCCTTTAC  194

seq1  CCTCTCAAGGGTTGCATGGGCCGCAAGAACGATACCAAATTATTATTGAT  247
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCTCTCAAGGGTTGCATGGG-CGCAAGAACGATACCAAATTATTATTGAT  243

seq1  GGTCATTCCTTTCAAACCTCTGTAGCAGGGGAGCGGTTGGTGTGCTGTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTCCTTTCAAACCTCTGTAGCAGGGGAGCGGTTGGTGTGCTGTTT  293

seq1  TAGATTTAGGGTTATCAGTGTTGTCTCTTTCAGATGTTAGGAGATTTCAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTAGGGTTATCAGTGTTGTCTCTTTCAGATGTTAGGAGATTTCAG  343

seq1  GTAGATTACAGGATGCTTGATCTAACATGAAAATATCCACATCAGGAAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTACAGGATGCTTGATCTAACATGAAAATATCCACATCAGGAAGT  393

seq1  TAAACGAGGAGGGTGACATCAATATTTGCATACTAGATAATGTGGTTATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACGAGGAGGGTGACATCAATATTTGCATACTAGATAATGTGGTTATG  443

seq1  CACACTTTATCCTTTTTTCTGTTGAGGAATATAAAATTTACTTTCCACTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTATCCTTTTTTCTGTTGAGGAATATAAAATTTACTTTCCACTG  493

seq1  CTATTGCCATCATTCCAAGTCTGCAACAGATTTCTGTGTGTGTTTAATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCCATCATTCCAAGTCTGCAACAGATTTCTGTGTGTGTTTAATTT  543

seq1  CTGATCTTTTCCGAGAGCTGTAGTAATTTCAAAATATTCTTAGTATTTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTTTTCCGAGAGCTGTAGTAATTTCAAAATATTCTTAGTATTTGA  593

seq1  CTTTCACTTCATATGTAGTTTTTATATTGTAAAGAATAAAAGATGGGAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACTTCATATGTAGTTTTTATATTGTAAAGAATAAAAGATGGGAAT  643

seq1  TTCTTACTACATTCTTAAAGTGAGTGATAGAAATAAAAAAATTACATAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACTACATTCTTAAAGTGAGTGATAGAAATAAAAAAATTACATAGT  693

seq1  TCTATTTTGATAACATTTTATTGGATTTGTAGGCAAGCCCCAAAGGTGGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTGATAACATTTTATTGGATTTGTAGGCAAGCCCCAAAGGTGGT  743

seq1  TGGTTGAATGTGTGTAGTGATTAGAAGGTTTGATAATTTATACATTTGGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGAATGTGTGTAGTGATTAGAAGGTTTGATAATTTATACATTTGGA  793

seq1  ATGTAATATTCATAACAAAATCTTTTAAAATTTAAGGTAAAATTCTCTTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATATTCATAACAAAATCTTTTAAAATTTAAGGTAAAATTCTCTTA  843

seq1  CCCTTTGGAAGTTTGTGGGTCCCCCCTTTTTTTGTTTTTGTTTTGTTTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGGAAGTTTGTGGGTCCCCCCTTTTTTTGTTTTTGTTTTGTTTTG  893

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTATA  947
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTATA  942

seq1  GCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTC  992

seq1  AGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGTGCGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGTGCGC  1042

seq1  CACCACGCCCGGCTAAGGGTTCCCCCTTTTTATATCCTTGTGATTATTGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACGCCCGGCTAAGGGTTCCCCCTTTTTATATCCTTGTGATTATTGT  1092

seq1  TAAAACTGCATTTAAATAATCCTTGGGAAGTGGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTGCATTTAAATAATCCTTGGGAAGTGGAATTC  1130

seq1: chr16_87575346_87576290
seq2: B6Ng01-207N11.g_63_1011

seq1  GAATTCTTGAATTACATAGCTCTTTTTATAGTCTCAGGAGCAACAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAATTACATAGCTCTTTTTATAGTCTCAGGAGCAACAGAAAA  50

seq1  GACACAAATGTGTTTTAGTCCAAGCCTTACAATATGTAAGTTACACAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAATGTGTTTTAGTCCAAGCCTTACAATATGTAAGTTACACAGTG  100

seq1  TAAATTCCAGCACTTACTGGCACTGCACTCAGTGTATGCGTTAAAGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCCAGCACTTACTGGCACTGCACTCAGTGTATGCGTTAAAGAACT  150

seq1  GTCAGTTACTGCATATCTTCAAATCCTTAAAGTCCTAAAGTAGTAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTACTGCATATCTTCAAATCCTTAAAGTCCTAAAGTAGTAAAAAA  200

seq1  TTGAATGGCCATAATTGAATGAACTCTAGATCTTCCTTTCGTCGACCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGGCCATAATTGAATGAACTCTAGATCTTCCTTTCGTCGACCTAG  250

seq1  ACTAGTTTTCTCCTCTTTGTTTCAGTAGACTGTGCTTGTTAATTTTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTTTCTCCTCTTTGTTTCAGTAGACTGTGCTTGTTAATTTTGAGA  300

seq1  GACATTACCATGGAGGGGTAACCTCTGTTCCCCTACCAAGTAGGTAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTACCATGGAGGGGTAACCTCTGTTCCCCTACCAAGTAGGTAATCC  350

seq1  TGAGAATCAAGGAGTAAATACAAGCTCCTCCCAACCACCATAGAATGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATCAAGGAGTAAATACAAGCTCCTCCCAACCACCATAGAATGTTT  400

seq1  GCCTTCCTAAATATATCTTCTGTGTGGGAAGCTGGGGTAGGAGAATTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCTAAATATATCTTCTGTGTGGGAAGCTGGGGTAGGAGAATTTAA  450

seq1  TTCTTGCGGGTTTTTTTTTTTTTTTTTTGAAGTGGACAGGACCACTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCGGGTTTTTTTTTTTTTTTTTTGAAGTGGACAGGACCACTAGTT  500

seq1  TCTGAAGTAGCCAAGCAGAAAACGGAAACGCTTAAGCAGGCTCGGCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGTAGCCAAGCAGAAAACGGAAACGCTTAAGCAGGCTCGGCCCCT  550

seq1  TGCTGAGGTGTGCTTGGCAGCGTGCTTTCTCATGGGCTCCCTTCCAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGGTGTGCTTGGCAGCGTGCTTTCTCATGGGCTCCCTTCCAAAGG  600

seq1  ATGGGCTACACTTCTGGAGGCTGTGAACTGATGACTGAGATGGCGCGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTACACTTCTGGAGGCTGTGAACTGATGACTGAGATGGCGCGCAG  650

seq1  TGGATCAAGCCACAATCTTGGACCGGGAGCTTGCGGTTTGGTTTCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCAAGCCACAATCTTGGACCGGGAGCTTGCGGTTTGGTTTCTCTCT  700

seq1  TACTTCACTTCTACTAAATTAGTCCTGGTGATTGGGCAGGATCCCAGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCACTTCTACTAAATTAGTCCTGGTGATTGGGCAGGATCCCAGGGG  750

seq1  CTGTAAGGGCTCTGCGTGTAACTTAAAACCTTTGCAAGCTCTATCCTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGGGCTCTGCGTGTAACTTAAAACCTTTGCAAGCTCTATCCTCTC  800

seq1  AGGAAAGGGGGTGAAGAGGAAGTCACTACCCTGGGCTCTGACCTCATCCA  850
      |||||| |||||||||||||||||||||||||||  ||||||||||||||
seq2  AGGAAATGGGGTGAAGAGGAAGTCACTACCCTGGCTTCTGACCTCATCCA  850

seq1  AGCCCCAGTC-TGTGCCCTGGGAAACTGTGTC-TCAAAGTTGGCTCG-AA  897
      |||||||||| |||||||| |||||||||||| ||| |||||||||| ||
seq2  AGCCCCAGTCTTGTGCCCT-GGAAACTGTGTCTTCATAGTTGGCTCGAAA  899

seq1  GGGAGGCTGCAGGACCATCTTTATTTACTCCCC--TTTGGACTCCAGTGA  945
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  GGGAGGCTGCAGGACCATCTTTATTTACTCCCCCTTTTGGACTCCAGTGA  949