BAC Information

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BAC

Clone NameB6Ng01-209E12
Chromosome16 (Build37)
Map Location 22,216,313 - 22,217,071
singlet/doubletsinglet
Overlap genenone
Upstream geneEphb3, 6430590I03Rik, Vps8, 2510009E07Rik, Ehhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a, Liph, Senp2, EG239760, Igf2bp2
Downstream geneEG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq, LOC100043541, EG625835
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209E12.bB6Ng01-209E12.g
ACCGA027939GA027940
length760440
definitionB6Ng01-209E12.b B6Ng01-209E12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaggactagagagacacattaaataataccacaaggccataac
cagcaaaaacccagattgtgagaaagtgtagaacgagcaaattgctgggg
aaaaggagagacaagaaaggaacaagggaagtcacactgggtgcagttag
agctgtgggagtctgaggtttgacctgacagaacccggacattggtcggt
caatttctttttttttttttttaaagatttatttatttattatatgtaag
tacactgtagttgtcttcagatacaccagaagagggcatcagatctcatt
acgggtggttgtgagccaccatgtggttgctgggatttgaacttcggacc
ttcggaagagcagtcaggtgctcttacccactgagccatctcaccagccc
ggtcggtcaatttctataggtcctgtacccctgaactccctggcctggac
ccactgatgctcatgtagcaagtgggactcctgtctgcctcctggtggga
cacctgtctgcctcctggtgggacatctgtctgcctcctggtgggacacc
tgtctacctcctggtgggacacctgtctccctcctggtgggacacctgtc
tgcctcctggtgggacacctacctgtctacctcctggtgggacacctgtc
tgcctcctggaacattactttctgctggtctctcaccctacttccacaat
ggatgacctgcactctgatgctgttctaagacaatccctggcagagccct
acaccatctg
atcccatgtgcaggcaccaaaccccaacactattactgatgccatgttgt
gcttgcagacaggagcctggcatgactgtcctctgagagactctaccagc
agctgactgagacagagacagaaacttacaatcaatcaagcattggtctg
aggtcggggacccctacggaagagttgggggaaggattgaaggagctgaa
ggggttggcaaccccttaagaaaaacaacagtgtcaatcaaccctggacc
cctctgaactcccccagatgaagccaccaaccaaagagcatacaagggct
gcttcgtggcccctagcacatatgtagcagaagactgccttgttggcctc
agtgagagagatgtggataatcctgtagaaacttgatgccccagggaaag
gggatgctggcaggcgtgaggtaggggttgggggtggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_22216313_22217071
seq2: B6Ng01-209E12.b_45_804 (reverse)

seq1  CAGATGGTGTAGGGCTCTGCCAGGGATTGTCTTAGAACAGCAACAGAGTG  50
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGATGGTGTAGGGCTCTGCCAGGGATTGTCTTAGAACAGCATCAGAGTG  50

seq1  CAGGTCATCCATTGTGGAAGTA-GGTGAGAGACCAGCAGAAAGTAATGTT  99
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGGTCATCCATTGTGGAAGTAGGGTGAGAGACCAGCAGAAAGTAATGTT  100

seq1  CCAGGAGGCAGACAGGTGTCCCACCAGGAGGTAGACAGGTAGGTGTCCCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGGCAGACAGGTGTCCCACCAGGAGGTAGACAGGTAGGTGTCCCA  150

seq1  CCAGGAGGCAGACAGGTGTCCCACCAGGAGGGAGACAGGTGTCCCACCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGGCAGACAGGTGTCCCACCAGGAGGGAGACAGGTGTCCCACCAG  200

seq1  GAGGTAGACAGGTGTCCCACCAGGAGGCAGACAGATGTCCCACCAGGAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGACAGGTGTCCCACCAGGAGGCAGACAGATGTCCCACCAGGAGG  250

seq1  CAGACAGGTGTCCCACCAGGAGGCAGACAGGAGTCCCACTTGCTACATGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGGTGTCCCACCAGGAGGCAGACAGGAGTCCCACTTGCTACATGA  300

seq1  GCATCAGTGGGTCCAGGCCAGGGAGTTCAGGGGTACAGGACCTATAGAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGTGGGTCCAGGCCAGGGAGTTCAGGGGTACAGGACCTATAGAAA  350

seq1  TTGACCGACCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCGACCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG  400

seq1  CTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCAC  450

seq1  AACCACCCGTAATGAGATCTGATGCCCTCTTCTGGTGTATCTGAAGACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCCGTAATGAGATCTGATGCCCTCTTCTGGTGTATCTGAAGACAA  500

seq1  CTACAGTGTACTTACATATAATAAATAAATAAATCTTTAAAAAAAAAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTGTACTTACATATAATAAATAAATAAATCTTTAAAAAAAAAAAA  550

seq1  AAAGAAATTGACCGACCAATGTCCGGGTTCTGTCAGGTCAAACCTCAGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATTGACCGACCAATGTCCGGGTTCTGTCAGGTCAAACCTCAGAC  600

seq1  TCCCACAGCTCTAACTGCACCCAGTGTGACTTCCCTTGTTCCTTTCTTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAGCTCTAACTGCACCCAGTGTGACTTCCCTTGTTCCTTTCTTGT  650

seq1  CTCTCCTTTTCCCCAGCAATTTGCTCGTTCTACACTTTCTCACAATCTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTTTCCCCAGCAATTTGCTCGTTCTACACTTTCTCACAATCTGG  700

seq1  GTTTTTGCTGGTTATGGCCTTGTGGTATTATTTAATGTGTCTCTCTAGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGCTGGTTATGGCCTTGTGGTATTATTTAATGTGTCTCTCTAGTC  750

seq1  CTGTGAATTC  759
      ||||||||||
seq2  CTGTGAATTC  760