BAC Information

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BAC

Clone NameB6Ng01-210B19
Chromosome16 (Build37)
Map Location 32,475,772 - 32,656,151
singlet/doubletdoublet
Overlap geneOsta, Zdhhc19, LOC385820, Tfrc, Tnk2
Upstream geneGm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a
Downstream geneENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210B19.bB6Ng01-210B19.g
ACCGA028539GA028540
length1,0791,049
definitionB6Ng01-210B19.b B6Ng01-210B19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,475,772 - 32,476,854)(32,655,107 - 32,656,151)
sequence
gaattcctgctcttctgaggagtacagtatgtcttccagggtccaagcca
ctctcctcaggctttgagtgctgagtccaggtctggcagcgaacaagcct
catacccaaccttgtcgtctttccttcgatagtacattcctgtcagcact
gtcatcaggaaggtctccagtatgagcatgtggcagttcatcactgcagt
gtggggtggaacatgacaagaagttacactgtgctacagaggaggaatcc
atagcagccctaacaagcaagctgaacgactccagtttacctccaaacca
gtactaagggatactaaactgttgtgtggagcgaggcaaactaatggtag
ccagaacttggctctggcttctgtgatctgagaccagtccatgtgttttt
ttctgcatagtctgcttcctaactggacccaatcctgtcccaagatgagg
actgaacttgctggttcggccactaggactggcctcaagctgggtatatt
gaagttctctgtgatcagagaggaaagagtagtcatctcggagcctccac
cctgatttcttggatccttcctgaacattttgagcatacatcaggttggc
ccccacttctgttccaagatcctttctcccctgatctgctctcagttgct
ctcacccacaagacagaaagaagctctaagtgcataccttgagacctgat
tttagaagagtagggaggtgagcaagcgatctgcccactgttagccaaga
tggagaaaatggcaggctgcagggcggtcaggatgacaagcacctgcaga
agagatgagatggggaggggctgacacctgccactcctggtcctgaagtc
agtgcaggttaggcataccattagatatgttagtggggttagcagaggac
tgtgttaacagaaaactaaacttaacctttattgaaaattggtgcagttt
ccatcttttagtccaattataatcctgttcctgcctcatatcaatagggc
tgctcatttaaaaaaaaattcagctatcgccctcttcatggccacatcga
atcccagttagctttctagcacataaaat
gaattcctatatatctttaagacactaatcaaatgctatcatttctctaa
gctcccacttctatcctcgaacagttgcttccaccaacacccctgggttg
ttaaaggaatgcatataaataaaagaagaaaaacttaaaacttgcatgga
agagccaaaagtatttttagaaattattcatctcggggctggaaagatgg
ctcagtggttaaaagtactggctgctcttccaaaagacgaaggttcaatt
cctagcacttacatgagcttacttacaacagtgtctagaactccagtccc
agggattatcactccctctttcgggctctgtgggcactgcactggtgtgg
tgcattgtgcatagacagacattcaagtgaaaacgcccataacacataaa
taaatttaaaaaatagtatattccagtccttaaagagttattatttgtgt
aactctttgggtaattgcataattctattgtgataaccattagcacagaa
ttctaatgtggttggtgccttgtaaatagccagaatccagcaagagatat
atataataaagagagcttagaaggacttcagcctttgtgacagacagcgt
aggtacagcgtagacagaaaggtagcctccttccccaggagctgctgcca
cttggctgaccagtggacaccaggaacaagtcagatcatcttccccctac
catgacgcagcccttgctggcctcaaactctgactgtcttgactttccaa
atactgagattaaaagtgtgtaccaccaggccctgttgctcctcactatt
ttcatcccaaagaaagacaattcctttatggaaagaggggctgtcaatca
ttttcaattactttcgccctaccccaaggacaacacaggcagagtgtaaa
acagcttctttctttctcttctcttctcttttatgagacaagggtttctc
gttaagtcctggctgtccagggacttacattgaagaccacgctcgctact
aaaactcgagaatcggcctgtctctgactctcgaagtgctgggacttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32475772_32476854
seq2: B6Ng01-210B19.b_44_1122

seq1  GAATTCCTGCTCTTCTGAGGAGTACAGTATGTCTTCCAGGGTCCAAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTCTTCTGAGGAGTACAGTATGTCTTCCAGGGTCCAAGCCA  50

seq1  CTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGTCTGGCAGCGAACAAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGTCTGGCAGCGAACAAGCCT  100

seq1  CATACCCAACCTTGTCGTCTTTCCTTCGATAGTACATTCGTGTCAGCACT  150
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CATACCCAACCTTGTCGTCTTTCCTTCGATAGTACATTCCTGTCAGCACT  150

seq1  GTCATCAGGAAGGTCTCCAGTATGAGCATGTGGCAGTTCATCACTGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAGGAAGGTCTCCAGTATGAGCATGTGGCAGTTCATCACTGCAGT  200

seq1  GTGGGGTGGAACATGACAAGAAGTTACACTGTGCTACAGAGGAGGAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTGGAACATGACAAGAAGTTACACTGTGCTACAGAGGAGGAATCC  250

seq1  ATAGCAGCCCTAACAAGCAAGCTGAACGACTCCAGTTTACCTCCAAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGCCCTAACAAGCAAGCTGAACGACTCCAGTTTACCTCCAAACCA  300

seq1  GTACTAAGGGATACTAAACTGTTGTGTGGAGCGAGGCAGACTAATGGTAG  350
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTACTAAGGGATACTAAACTGTTGTGTGGAGCGAGGCAAACTAATGGTAG  350

seq1  CCAGAACTTGGCTCTGGCTTCTGTGATCTGAGACCAGTCCATGTGTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACTTGGCTCTGGCTTCTGTGATCTGAGACCAGTCCATGTGTTTTT  400

seq1  TTCTGCATAGTCTGCTTCCTAACTGGACCCAATCCTGTCCCAAGATGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATAGTCTGCTTCCTAACTGGACCCAATCCTGTCCCAAGATGAGG  450

seq1  ACTGAACTTGCTGGTTCGGCCACTAGGACTGGCCTCAAGCTGGGTATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACTTGCTGGTTCGGCCACTAGGACTGGCCTCAAGCTGGGTATATT  500

seq1  GAAGTTCTCTGTGATCAGAGAGGAAAGAGTAGTCATCTCGGAGCCTCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCTCTGTGATCAGAGAGGAAAGAGTAGTCATCTCGGAGCCTCCAC  550

seq1  CCTGATTTCTTGGATCCTTCCTGAACATTTTGAGCAGACATCAGGTTGGC  600
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCTGATTTCTTGGATCCTTCCTGAACATTTTGAGCATACATCAGGTTGGC  600

seq1  CCCCACTTCTGTTCCAAGATCCTTTCTCCCCTGATCTGCTCTCAGTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTTCTGTTCCAAGATCCTTTCTCCCCTGATCTGCTCTCAGTTGCT  650

seq1  CTCACCCACAAGACAGAAAGAAGCTCTAAGTGCATACCTTGAGACCTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCACAAGACAGAAAGAAGCTCTAAGTGCATACCTTGAGACCTGAT  700

seq1  TTTAGAAGAGTAGGGAGGTGAGCAAGCGATCTGCCCACTGTTAGCCAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAGAGTAGGGAGGTGAGCAAGCGATCTGCCCACTGTTAGCCAAGA  750

seq1  TGGAGAAAATGGCAGGCTGCAGGGCGGTCAGGATGACAAGCACCTGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAATGGCAGGCTGCAGGGCGGTCAGGATGACAAGCACCTGCAGA  800

seq1  AGAGATGAGATGGGGAGGGGCTGACACCTGCCACTCCTGGTCCTGAAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGAGATGGGGAGGGGCTGACACCTGCCACTCCTGGTCCTGAAGTC  850

seq1  AGTGCAGGTTAGGCATACCATTAGATATGTTAGTGGGGTTAGCAGAGGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGGTTAGGCATACCATTAGATATGTTAGTGGGGTTAGCAGAGGAC  900

seq1  TGTGTTAACAGAAGACTAAAACTTAACCTTTATTGAAAATTGGTGCAGTT  950
      ||||||||||||| ||| ||||||||||||||||||||||||||||||||
seq2  TGTGTTAACAGAAAACT-AAACTTAACCTTTATTGAAAATTGGTGCAGTT  949

seq1  TCCATC-TTTAGTCAAATTATAATCCTGTTCCTGCCTCATATTCATTAGG  999
      |||||| ||||||| |||||||||||||||||||||||||| ||| ||||
seq2  TCCATCTTTTAGTCCAATTATAATCCTGTTCCTGCCTCATA-TCAATAGG  998

seq1  GTTGCTCATTTAAAAAAAAAAATCAGCTTATCGCCCTCTTTCATGGCCAC  1049
      | ||||||||| ||||||||| ||||| |||||||||| |||||||||| 
seq2  GCTGCTCATTT-AAAAAAAAATTCAGC-TATCGCCCTC-TTCATGGCCA-  1044

seq1  CATCAGATACCCAG-TAGC-ATCTAGCACATAAAAT  1083
      |||| ||  ||||| ||||  |||||||||||||||
seq2  CATC-GAATCCCAGTTAGCTTTCTAGCACATAAAAT  1079

seq1: chr16_32655107_32656151
seq2: B6Ng01-210B19.g_65_1113 (reverse)

seq1  TTAA-TCCCAGCACTT-GGGAGGCAGAGACAGGCGGATCTCT-GAGTTCG  47
      |||| ||||||||||| | ||| ||||||||||| ||| ||| |||||  
seq2  TTAAGTCCCAGCACTTCGAGAGTCAGAGACAGGCCGAT-TCTCGAGTTTT  49

seq1  AG--GCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGACTATAC  95
      ||  || ||| |||||| ||| || ||| || |||||||||||||| || 
seq2  AGTAGCGAGCGTGGTCTTCAATGTAAGTCCCTGGACAGCCAGGACT-TAA  98

seq1  GGAGAAACCC-TGTCTCAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAG  144
       ||||||||| ||||||  | |||| | || | || |||||||||| |||
seq2  CGAGAAACCCTTGTCTC--ATAAAAGAGAAGAGAAGAGAAAGAAAG-AAG  145

seq1  CTGTTTTACACTCTGCCTGTGTTGTCCTT-GGGTAGGGCGAAAGTAATTG  193
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTGTTTTACACTCTGCCTGTGTTGTCCTTGGGGTAGGGCGAAAGTAATTG  195

seq1  -AAATGATTGACAGCCCCTCTTTCCATAAAGGAATTGTC-TTCTTTGGAT  241
       |||||||||||||||||||||||||||||||||||||| ||||||||  
seq2  AAAATGATTGACAGCCCCTCTTTCCATAAAGGAATTGTCTTTCTTTGGGA  245

seq1  TGAAAATAGTGAGGAGCAACAGGGCCTGGTGGTACACACTTTTAATCTCA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAGTGAGGAGCAACAGGGCCTGGTGGTACACACTTTTAATCTCA  295

seq1  GTATTTGGAAAGTCAAGACAGTCAGAGTTTGAGGCCAGCAAGGGCTGCGT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGGAAAGTCAAGACAGTCAGAGTTTGAGGCCAGCAAGGGCTGCGT  345

seq1  CATGGTAGGGGGAAGATGATCTGACTTGTTCCTGGTGTCCACTGGGCAGC  391
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATGGTAGGGGGAAGATGATCTGACTTGTTCCTGGTGTCCACTGGTCAGC  395

seq1  CAAGTGGCAGCAGCTCCTGGGGAAGGAGGCTACCTTTCTGTCTACGCTGT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGCAGCAGCTCCTGGGGAAGGAGGCTACCTTTCTGTCTACGCTGT  445

seq1  ACCTACGCTGTCTGTCACAAAGGCTGAAGTCCTTCTAAGCTCTCTTTATT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACGCTGTCTGTCACAAAGGCTGAAGTCCTTCTAAGCTCTCTTTATT  495

seq1  ATATATATCTCTTGCTGGATTCTGGCTATTTACAAGGCACCAACCACATT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCTCTTGCTGGATTCTGGCTATTTACAAGGCACCAACCACATT  545

seq1  AGAATTCTGTGCTAATGGTTATCACAATAGAATTATGCAATTACCCAAAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTGTGCTAATGGTTATCACAATAGAATTATGCAATTACCCAAAG  595

seq1  AGTTACACAAATAATAACTCTTTAAGGACTGGAATATACTATTTTTTAAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACACAAATAATAACTCTTTAAGGACTGGAATATACTATTTTTTAAA  645

seq1  TTTATTTATGTGTTATGGGCGTTTTCACTTGAATGTCTGTCTATGCACAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATGTGTTATGGGCGTTTTCACTTGAATGTCTGTCTATGCACAA  695

seq1  TGCACCACACCAGTGCAGTGCCCACAGAGCCCGAAAGAGGGAGTGATAAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCACACCAGTGCAGTGCCCACAGAGCCCGAAAGAGGGAGTGATAAT  745

seq1  CCCTGGGACTGGAGTTCTAGACACTGTTGTAAGTAAGCTCATGTAAGTGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGACTGGAGTTCTAGACACTGTTGTAAGTAAGCTCATGTAAGTGC  795

seq1  TAGGAATTGAACCTTCGTCTTTTGGAAGAGCAGCCAGTACTTTTAACCAC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATTGAACCTTCGTCTTTTGGAAGAGCAGCCAGTACTTTTAACCAC  845

seq1  TGAGCCATCTTTCCAGCCCCGAGATGAATAATTTCTAAAAATACTTTTGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATCTTTCCAGCCCCGAGATGAATAATTTCTAAAAATACTTTTGG  895

seq1  CTCTTCCATGCAAGTTTTAAGTTTTTCTTCTTTTATTTATATGCATTCCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCATGCAAGTTTTAAGTTTTTCTTCTTTTATTTATATGCATTCCT  945

seq1  TTAACAACCCAGGGGTGTTGGTGGAAGCAACTGTTCGAGGATAGAAGTGG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAACCCAGGGGTGTTGGTGGAAGCAACTGTTCGAGGATAGAAGTGG  995

seq1  GAGCTTAGAGAAATGATAGCATTTGATTAGTGTCTTAAAGATATATAGGA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTAGAGAAATGATAGCATTTGATTAGTGTCTTAAAGATATATAGGA  1045

seq1  ATTC  1045
      ||||
seq2  ATTC  1049