BAC Information

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BAC

Clone NameB6Ng01-210L20
Chromosome16 (Build37)
Map Location 92,329,821 - 92,514,714
singlet/doubletdoublet
Overlap geneKcne1, Dscr1, 2410124H12Rik, Clic6
Upstream geneIfnar2, Il10rb, Ifnar1, LOC665939, LOC665947, Ifngr2, Tmem50b, ORF28, Gart, Son, Donson, Cryzl1, LOC100040653, Itsn1, Atp5o, Mrps6, Slc5a3, Kcne2, 1190017O12Rik, 4930563D23Rik
Downstream geneRunx1, EG666023, LOC100040747
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210L20.bB6Ng01-210L20.g
ACCGA029000GA029001
length1,042746
definitionB6Ng01-210L20.b B6Ng01-210L20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,329,821 - 92,330,866)(92,513,969 - 92,514,714)
sequence
gaattcagttcccagcacccgtgtcagtagctcacaaccacttgtaactc
cagctcctgggacccatggtctcttctggtcttcacgacaccttcatacg
tgtgcacaaagatgcaagcatcaacacgtaattaaaagcttttttttttt
tttaatcaaactacaaatgatttcttaccagcgttctggcctacaagaaa
gacacaaaaaaatctaaaatctcagaggaaaaatatgcaatgggatcaga
ggaaaagggcttcactgtaatggagaatgtcagcatgaggcggtgtgagt
ctaaaccaagtcgacattttcccatctactggtttgtcaatatatggagt
tccagaaatcaccatgtgtggggtaatgagatcctgttatcattttcggg
tcaagggtaaatctgttctaccaatgtggagggctccttagcagaccctc
ctgacattcacggtgaccttacacctctttgatcctgacacttgtcctga
gcaacctgtcctacggctctccagacagggctgcagtataaaatcaggcc
gtggatctgtgggtcccacatcccagagctttagccagccatagaaagga
agtgtttgcaaaagtgtttgcacaagcctgccctgaccaccagggacctt
ctcctgtcgttattccctaaacaggatgtaccggctagttttgtgtcaac
ttgacacagctggagttatcacagagaaaggagcttcagttggggaaatg
cctccatgagatccagctgtaaggcattttctcaattagtgatcaagggg
gaaaggccccttgtggctgggaccatctctgggctggtagtcttggttct
ataatagagcaggctgagcaagccagcggaagcaagcccagcaaagaata
tccctccatgggctctgtatcagctccttgcttcctgcctgcttgagttc
agttctgacttctttggtgattaacagcagtatggaagtgtaagctgata
aacctttctccccaagtgcctcttggtcatgatgtttgtgca
gaattctttttcctcagcaggcatcacaagaagagagagctgaggaggct
gaggttgtgccccatctggcccacatcttggctcaacgaaagaaaagtta
ctcaaaaaacatgggactaggaagacagtgtggtcaggcaagtgctgcag
gagaaccctggttcaatccctagaacgtcactcgaaagcccgactcagtg
gtacacgcttgtcaccccagtgctgaagagtttgggacaggcaaatccct
ggggttggctggccacaaattgcagtgggagatcctgtctcacaaaacaa
agatagggactggagagacactttagtgggttagaagcacacagtgctct
tgctgaagacttgtatttcttttccagcatccacgtggggtgtctcacaa
gcccccagagagattccacagccctggcctctaaggttggctgcatacat
ctacctaaatgcacaagcacaccaggtacaggcaaaagagacaagagggc
tttggggacaagactgaggacgaagctttccctgggccctcattatttaa
aaaggtatttttaaaaattcacattatttaaagaagaggaggaggagaaa
gggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagatgaagaagaagaagaagaagaaaaagaagaagaaaaaga
agaggagaagaggaggaggaggaagaagaagaaggaggaggaggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_92329821_92330866
seq2: B6Ng01-210L20.b_43_1084

seq1  GAATTCAGTTCCCAGCACCCGTGTCAGTAGCTCACAACCACTTGTAACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCCAGCACCCGTGTCAGTAGCTCACAACCACTTGTAACTC  50

seq1  CAGCTCCTGGGACCCATGGTCTCTTCTGGTCTTCACGACACCTTCATACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTGGGACCCATGGTCTCTTCTGGTCTTCACGACACCTTCATACG  100

seq1  TGTGCACAAAGATGCAAGCATCAACACGTAATTAAAAGCTTTTTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACAAAGATGCAAGCATCAACACGTAATTAAAAGCTTTTTTTTTTT  150

seq1  TTTAATCAAACTACAAATGATTTCTTACCAGCGTTCTGGCCTACAAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCAAACTACAAATGATTTCTTACCAGCGTTCTGGCCTACAAGAAA  200

seq1  GACACAAAAAAATCTAAAATCTCAGAGGAAAAATATGCAATGGGATCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAAAAAATCTAAAATCTCAGAGGAAAAATATGCAATGGGATCAGA  250

seq1  GGAAAAGGGCTTCACTGTAATGGAGAATGTCAGCATGAGGCGGTGTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGGGCTTCACTGTAATGGAGAATGTCAGCATGAGGCGGTGTGAGT  300

seq1  CTAAACCAAGTCGACATTTTCCCATCTACTGGTTTGTCAATATATGGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACCAAGTCGACATTTTCCCATCTACTGGTTTGTCAATATATGGAGT  350

seq1  TCCAGAAATCACCATGTGTGGGGTAATGAGATCCTGTTATCATTTTCGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAATCACCATGTGTGGGGTAATGAGATCCTGTTATCATTTTCGGG  400

seq1  TCAAGGGTAAATCTGTTCTACCAATGTGGAGGGCTCCTTAGCAGACCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGTAAATCTGTTCTACCAATGTGGAGGGCTCCTTAGCAGACCCTC  450

seq1  CTGACATTCACGGTGACCTTACACCTCTTTGATCCTGACACTTGTCCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATTCACGGTGACCTTACACCTCTTTGATCCTGACACTTGTCCTGA  500

seq1  GCAACCTGTCCTACGGCTCTCCAGACAGGGCTGCAGTATAAAATCAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTGTCCTACGGCTCTCCAGACAGGGCTGCAGTATAAAATCAGGCC  550

seq1  GTGGATCTGTGGGTCCCACATCCCAGAGCTTTAGCCAGCCATAGAAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCTGTGGGTCCCACATCCCAGAGCTTTAGCCAGCCATAGAAAGGA  600

seq1  AGTGTTTGCAAAAGTGTTTGCACAAGCCTGCCCTGACCACCAGGGACCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGCAAAAGTGTTTGCACAAGCCTGCCCTGACCACCAGGGACCTT  650

seq1  CTCCTGTCGTTATTCCCTAAACAGGATGTACCGGCTAGTTTTGTGTCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTCGTTATTCCCTAAACAGGATGTACCGGCTAGTTTTGTGTCAAC  700

seq1  TTGACACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGGGGAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGGGGAAATG  750

seq1  CCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAGTGATCAAGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAGTGATCAAGGGG  800

seq1  GAAAGGCCCCTTGTGGCTGGGACCATCTCTGGGCTGGTAGTCTTGGTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCCCCTTGTGGCTGGGACCATCTCTGGGCTGGTAGTCTTGGTTCT  850

seq1  ATAATAGAGCAGGCTGAGCAAGCCAGCGGAAGCAAG-CCAGCAAAGAATA  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATAATAGAGCAGGCTGAGCAAGCCAGCGGAAGCAAGCCCAGCAAAGAATA  900

seq1  TCCCTCCATGGCCTCTGTATCAGCTCC-TGCTTCCTGCCCTGCTTGAGTT  948
      ||||||||||| ||||||||||||||| ||||||||| ||||||||||||
seq2  TCCCTCCATGGGCTCTGTATCAGCTCCTTGCTTCCTG-CCTGCTTGAGTT  949

seq1  CCAGTCCTGACTTCCTTTGGTGATAAACAGCAGTATGGAAGTGTAAGCTG  998
       |||| ||||||| |||||||||| |||||||||||||||||||||||||
seq2  -CAGTTCTGACTT-CTTTGGTGATTAACAGCAGTATGGAAGTGTAAGCTG  997

seq1  AATAAACCCTTTCCTCCCCAAGTGCTTCTTGGTCATGATGTTTGTGCA  1046
       |||||||  || |||||||||||| ||||||||||||||||||||||
seq2  -ATAAACC--TTTCTCCCCAAGTGCCTCTTGGTCATGATGTTTGTGCA  1042

seq1: chr16_92513969_92514714
seq2: B6Ng01-210L20.g_72_817 (reverse)

seq1  CTCCTCCTCCTCCTTCTTCTTCTTCCTCCTCCTCCTCTTCTCCTCTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTCCTCCTTCTTCTTCTTCCTCCTCCTCCTCTTCTCCTCTTCTT  50

seq1  TTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  100
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCATCTTCTTCTTCTTCT  100

seq1  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCTTTC  150

seq1  TCCTCCTCCTCTTCTTTAAATAATGTGAATTTTTAAAAATACCTTTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCTTCTTTAAATAATGTGAATTTTTAAAAATACCTTTTTAA  200

seq1  ATAATGAGGGCCCAGGGAAAGCTTCGTCCTCAGTCTTGTCCCCAAAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAGGGCCCAGGGAAAGCTTCGTCCTCAGTCTTGTCCCCAAAGCCC  250

seq1  TCTTGTCTCTTTTGCCTGTACCTGGTGTGCTTGTGCATTTAGGTAGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTCTTTTGCCTGTACCTGGTGTGCTTGTGCATTTAGGTAGATGT  300

seq1  ATGCAGCCAACCTTAGAGGCCAGGGCTGTGGAATCTCTCTGGGGGCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCCAACCTTAGAGGCCAGGGCTGTGGAATCTCTCTGGGGGCTTGT  350

seq1  GAGACACCCCACGTGGATGCTGGAAAAGAAATACAAGTCTTCAGCAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACCCCACGTGGATGCTGGAAAAGAAATACAAGTCTTCAGCAAGAG  400

seq1  CACTGTGTGCTTCTAACCCACTAAAGTGTCTCTCCAGTCCCTATCTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTGCTTCTAACCCACTAAAGTGTCTCTCCAGTCCCTATCTTTGT  450

seq1  TTTGTGAGACAGGATCTCCCACTGCAATTTGTGGCCAGCCAACCCCAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAGACAGGATCTCCCACTGCAATTTGTGGCCAGCCAACCCCAGGG  500

seq1  ATTTGCCTGTCCCAAACTCTTCAGCACTGGGGTGACAAGCGTGTACCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTGTCCCAAACTCTTCAGCACTGGGGTGACAAGCGTGTACCACT  550

seq1  GAGTCGGGCTTTCGAGTGACGTTCTAGGGATTGAACCAGGGTTCTCCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCGGGCTTTCGAGTGACGTTCTAGGGATTGAACCAGGGTTCTCCTGC  600

seq1  AGCACTTGCCTGACCACACTGTCTTCCTAGTCCCATGTTTTTTGAGTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTGCCTGACCACACTGTCTTCCTAGTCCCATGTTTTTTGAGTAAC  650

seq1  TTTTCTTTCGTTGAGCCAAGATGTGGGCCAGATGGGGCACAACCTCAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCGTTGAGCCAAGATGTGGGCCAGATGGGGCACAACCTCAGCC  700

seq1  TCCTCAGCTCTCTCTTCTTGTGATGCCTGCTGAGGAAAAAGAATTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGCTCTCTCTTCTTGTGATGCCTGCTGAGGAAAAAGAATTC  746