BAC Information

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BAC

Clone NameB6Ng01-211C20
Chromosome16 (Build37)
Map Location 64,854,749 - 64,855,785
singlet/doubletsinglet
Overlap geneCggbp1
Upstream geneEpha3, LOC100043540, Ckt2, 4930453N24Rik, Zfp654, LOC433036
Downstream geneLOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931, Pou1f1, Chmp2b, EG383186, Vgll3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211C20.bB6Ng01-211C20.g
ACCGA029323GA029324
length1,0441,068
definitionB6Ng01-211C20.b B6Ng01-211C20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaaatcgctttcccatcaagaagctctttaacttgaacacat
gtctaagttgggcaaggttagtatttttagtactatgaatgctgctgtga
ttgtgattttctaaacgatagagacatttagaatactttaatatttcttc
aggggtctgatttatttgtcataaaaaacaaggtattgggaagttggatt
agtagggccgtgtgcttcctgtgcaagtgtgtggactctctgcagtgtgt
atctataatcccagttctggggtcagttagagaagctgttcaaaaacaac
aaggtgtgcacataggcagtaccacatacacacacacgtcaaggaatgga
cctagctggatgctgctgatttgctttagttttgttttccttgaatatgt
cagatgtttagaagacatgtgacctataaattgaactaaaagtgtttgtg
ggatacggaggatcactgaattaagtttgtttttcctgttgttgttttgg
agggggtgtatttattgttttttttttaaatctacccttacaaaagcact
tataactactttttattaatgttaatcacttctagaatgaactattatca
taatactaacatctttctcttgtctttagaagaaccttattcagagacaa
aatggaacgatttgttgtaacagcaccacctgctcgaaatcgttctaaga
ctgctttgtacgtaacccctctggatcgagtcactgaatttggaggtgag
cttcatgaggatggaggcaaactcttctgcaccctcttgcaatgtggtgc
tgaatcatgttcgcaagtctgccattagtgaccacctcaagtcaaagact
catacaaagaggaaggcagaatttgagagcaaaatgtgagaagaagcata
ggcccctgactgcatcgcttcagtgcacagtccctgccgcaaacagagaa
agccagtgtatccaggaactttggtgaaaatgtgcctgggaagctcaaca
tccccttgaagaagggccgatccatcccgcaagtgcgagcgttc
gaattctttgttgaacagtactccatactgtggggagcgggtgtggcggc
agtcccaaaggcgccagggactgcagctaagtcatatgacttgcacctga
cttcctcatataagccacaaacatcttgagagctgcacaggtgaaccagg
atacaggtgaatccattttgatggagatatgcccctgctgccctgattag
ctgaagctgcgtgcctggtgaggtggcgtggcctgctgtgcgtggatggg
aactgagagtataaaagagtgagaggcccagggttcaagggagatatata
aacaagggagatataaaaacaagggagatataaacaggggagatataaac
aggggagatataaacaagggagatatagagaaagaagaaacaggactgaa
taaatgtgtgcagaaggatcctgtagcagcgttgttcttcctggccagtt
gagcgcacgcaacaagtggtgccgaaacccgggacaagaaacatcttcag
gcatgagcgaagaccccctgctacagggaggattcagaactgcatcacgg
ggaaggagtggttaataaaggttcccgtgaaacagactgttgagaaggat
ccggcatggattcagaactcttcagctggggaaaggtactgatgaagaga
aagaagagagatgaagactgaataaactgctgttagaaggactggtggtc
gtgtcgttcttgctggtcgagagcgggcgcgacaatttggtggcccgtac
aggggaaccgactcccccaccgagttcagaactttcagcagtcagtggtt
gcccggcagggtaagttcatggtgagtgaaacttgcgaccccaggagttt
gggaaggacctcggataaagtagaggtgagcataaaggttgccaggaagt
agcacaaagtaacccagggagtttggggaagggactttccgataaataga
ggcgaattattacgttggccagggaagcaggtacaggtaacttaagggtt
catggttttggaatagttaaggttcctgggttctcaggacagattatagg
actcatgaattaccctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_64854749_64855785
seq2: B6Ng01-211C20.b_49_1092

seq1  GAATTCTCAAAATCGCTTTCCCATCAAGAAGCTCTTTAACTTGAACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAATCGCTTTCCCATCAAGAAGCTCTTTAACTTGAACACAT  50

seq1  GTCTAAGTTGGGCAAGGTTAGTATTTTTAGTACTATGAATGCTGCTGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGTTGGGCAAGGTTAGTATTTTTAGTACTATGAATGCTGCTGTGA  100

seq1  TTGTGATTTTCTAAACGATAGAGACATTTAGAATACTTTAATATTTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTTTCTAAACGATAGAGACATTTAGAATACTTTAATATTTCTTC  150

seq1  AGGGGTCTGATTTATTTGTCATAAAAAACAAGGTATTGGGAAGTTGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCTGATTTATTTGTCATAAAAAACAAGGTATTGGGAAGTTGGATT  200

seq1  AGTAGGGCCGTGTGCTTCCTGTGCAAGTGTGTGGACTCTCTGCAGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGGCCGTGTGCTTCCTGTGCAAGTGTGTGGACTCTCTGCAGTGTGT  250

seq1  ATCTATAATCCCAGTTCTGGGGTCAGTTAGAGAAGCTGTTCAAAAACAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATAATCCCAGTTCTGGGGTCAGTTAGAGAAGCTGTTCAAAAACAAC  300

seq1  AAGGTGTGCACATAGGCAGTACCACATACACACACACGTCAAGGAATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTGCACATAGGCAGTACCACATACACACACACGTCAAGGAATGGA  350

seq1  CCTAGCTGGATGCTGCTGATTTGCTTTAGTTTTGTTTTCCTTGAATATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTGGATGCTGCTGATTTGCTTTAGTTTTGTTTTCCTTGAATATGT  400

seq1  CAGATGTTTAGAAGACATGTGACCTATAAATTGAACTAAAAGTGTTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTTTAGAAGACATGTGACCTATAAATTGAACTAAAAGTGTTTGTG  450

seq1  GGATACGGAGGATCACTGAATTAAGTTTGTTTTTCCTGTTGTTGTTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACGGAGGATCACTGAATTAAGTTTGTTTTTCCTGTTGTTGTTTTGG  500

seq1  AGGGGGTGTATTTATTGTTTTTTTTTTAAATCTACCCTTACAAAAGCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGTGTATTTATTGTTTTTTTTTTAAATCTACCCTTACAAAAGCACT  550

seq1  TATAACTACTTTTTATTAATGTTAATCACTTCTAGAATGAACTATTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTACTTTTTATTAATGTTAATCACTTCTAGAATGAACTATTATCA  600

seq1  TAATACTAACATCTTTCTCTTGTC-TTAGAAGAACCTTATTCAGAGACAA  649
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAATACTAACATCTTTCTCTTGTCTTTAGAAGAACCTTATTCAGAGACAA  650

seq1  AATGGAACGATTTGTTGTAACAGCACCACCTGCTCGAAATCGTTCTAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAACGATTTGTTGTAACAGCACCACCTGCTCGAAATCGTTCTAAGA  700

seq1  CTGCTTTGTACGTAACCCCTCTGGATCGAGTCACTGAATTTGGAGGTGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTGTACGTAACCCCTCTGGATCGAGTCACTGAATTTGGAGGTGAG  750

seq1  CTTCATGAGGATGGAGGCAAACTCTTCTGCA-CCTCTTGCAATGTGGTGC  798
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTCATGAGGATGGAGGCAAACTCTTCTGCACCCTCTTGCAATGTGGTGC  800

seq1  TGAATCATGTTCGCAAGTCTGCCATTAGTGACCACCTCAAGTCAAAGACT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCATGTTCGCAAGTCTGCCATTAGTGACCACCTCAAGTCAAAGACT  850

seq1  CATACAAAGAGGAAGGCAGAATTTGAAGAGCAAAATGTGAGAAAGAAGCA  898
      ||||||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  CATACAAAGAGGAAGGCAGAATTTG-AGAGCAAAATGTGAG-AAGAAGCA  898

seq1  GAGGCCCCTGACTGCATCGCTTCAGTGCAACAGT-CCTG-CGCAAACAGA  946
       ||||||||||||||||||||||||||| ||||| |||| ||||||||||
seq2  TAGGCCCCTGACTGCATCGCTTCAGTGC-ACAGTCCCTGCCGCAAACAGA  947

seq1  GAAAGCCAGTGTTATCCAGG-ACTTT-GTGAAAATGTGCCT-GGAAGC-C  992
      ||||||||||| |||||||| ||||| |||||||||||||| |||||| |
seq2  GAAAGCCAGTG-TATCCAGGAACTTTGGTGAAAATGTGCCTGGGAAGCTC  996

seq1  AACATCCCCCTGGAGAA-GGCCGAT-CATCCCGC-AGTGCGAGCGTTC  1037
      ||||||||| || |||| ||||||| |||||||| |||||||||||||
seq2  AACATCCCCTTGAAGAAGGGCCGATCCATCCCGCAAGTGCGAGCGTTC  1044