BAC Information

Click to search

BAC

Clone NameB6Ng01-214J12
Chromosome16 (Build37)
Map Location 79,390,184 - 79,390,724
singlet/doubletsinglet
Overlap genenone
Upstream geneD16Ertd472e, LOC100039605, 4930570E03Rik, Chodl, Prss7
Downstream geneEG383172, 1700066C05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214J12.bB6Ng01-214J12.g
ACCGA031803GA031804
length715573
definitionB6Ng01-214J12.b B6Ng01-214J12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaatcttgaatggcagaaaaacacttaaaggcatg
ttaaaaattcttagtcatcaggtaaatgaaaatcaaacaactctgagact
ctatcttacatctaatcaagaactcaagagatatctcatgctggcaagga
tgaagagtaaggggaacactttccattgctggtgggagagcaattttcta
caaccattttggaaatcaatttggtatattctcagaaaactgaaaatagt
tatacctcacaacccagctataccactcctgggcatatgcccaaagtctc
acaaagacatttgctcaaatatgttcatagcagctttattcataatatcc
agaaacgggaaacaaggtagaagtccctcaacttaatagtggataaagaa
aatgctgtatgtctacacaatgaaatactattcagatattcaaaatgaaa
acatcatgaattttgcaagccaatgggtagaacttgagcatatcatcctg
agtgagttaagcagtctcaaaaggacatacatggtatgcactcacttatg
aatagctattagccataaaatacaggtatatcttacaatatacagtccca
aagaagctaaacaagaagggagaccctagtggggaagcttgagtcactaa
gaatggggattaaaatagtcataagagacagatggaaggaggaaaatagg
ggggaagggatgggg

gaattctagtgataagtatggaattatttattgtcttaagaagggaaatc
ttcagaaggaaaaaaaaatgccattgaaattcatgagagaatgagaagaa
agacataaacaggctcacattactttgttatggtaatcaaggtgtatgct
aacatgaactttgagccatgattgatcaaggagtcagctttaaatatcca
agaccttgaggagaaggctcagtctggagtgtgaggacctgtgttcattt
ctaaaaactcacaaacgtaagtcaaaaacctatcactggaaggttagaaa
caggactgctgggatcagatggcctctagcatagacatgtgcattggatg
gaggttatggaagacatgctgactgtagagaaaaagtatagctgatgtaa
tgaagaaaaacactgatattgatctctaactgacacatttgcacacacac
atacaccacacacacacacacacacacacacacacggtgtctctctctgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtggggtgtgtgtgtgtgtgtgtg
tgtgtgagagagagatatgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_79390184_79390724
seq2: B6Ng01-214J12.g_64_605 (reverse)

seq1  CACACACACA-CACACACACACACACACACACACACACACACACAGAGAG  49
      |||||||||| | |||||||||||||||||||||||||||||||||||||
seq2  CACACACACACCCCACACACACACACACACACACACACACACACAGAGAG  50

seq1  AGACACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTATGTGTGTGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTATGTGTGTGT  100

seq1  GCAAATGTGTCAGTTAGAGATCAATATCAGTGTTTTTCTTCATTACATCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTGTCAGTTAGAGATCAATATCAGTGTTTTTCTTCATTACATCA  150

seq1  GCTATACTTTTTCTCTACAGTCAGCATGTCTTCCATAACCTCCATCCAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACTTTTTCTCTACAGTCAGCATGTCTTCCATAACCTCCATCCAAT  200

seq1  GCACATGTCTATGCTAGAGGCCATCTGATCCCAGCAGTCCTGTTTCTAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGTCTATGCTAGAGGCCATCTGATCCCAGCAGTCCTGTTTCTAAC  250

seq1  CTTCCAGTGATAGGTTTTTGACTTACGTTTGTGAGTTTTTAGAAATGAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGTGATAGGTTTTTGACTTACGTTTGTGAGTTTTTAGAAATGAAC  300

seq1  ACAGGTCCTCACACTCCAGACTGAGCCTTCTCCTCAAGGTCTTGGATATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCCTCACACTCCAGACTGAGCCTTCTCCTCAAGGTCTTGGATATT  350

seq1  TAAAGCTGACTCCTTGATCAATCATGGCTCAAAGTTCATGTTAGCATACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTGACTCCTTGATCAATCATGGCTCAAAGTTCATGTTAGCATACA  400

seq1  CCTTGATTACCATAACAAAGTAATGTGAGCCTGTTTATGTCTTTCTTCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATTACCATAACAAAGTAATGTGAGCCTGTTTATGTCTTTCTTCTC  450

seq1  ATTCTCTCATGAATTTCAATGGCATTTTTTTTTCCTTCTGAAGATTTCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCATGAATTTCAATGGCATTTTTTTTTCCTTCTGAAGATTTCCC  500

seq1  TTCTTAAGACAATAAATAATTCCATACTTATCACTAGAATTC  541
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAGACAATAAATAATTCCATACTTATCACTAGAATTC  542


| Home | SequenceCutter | Blast | Download |