BAC Information

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BAC

Clone NameB6Ng01-215A08
Chromosome16 (Build37)
Map Location 53,526,198 - 53,640,621
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043430, LOC667895
Downstream geneLOC433027, LOC100043442
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215A08.bB6Ng01-215A08.g
ACCGA032111GA032112
length864269
definitionB6Ng01-215A08.b B6Ng01-215A08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,639,758 - 53,640,621)(53,526,198 - 53,526,471)
sequence
gaattcagtagtcaattttacatacaagaggaaaagacttaccaaggtca
gtctagggttagatagctgcagaggggcacataagaattcaagtaagact
tttatttcggtgattaaaccatcatgtttttttaggtttttgcttttttt
taatttatttttttaattaggtattttcttcatttatattccaaatgcta
tcccaaaagtcccccagaacccccccccactcccctacccacccactcct
acttcttggtcctggcattctcctgtactgaggtatataaagtttgcaag
accaaggggcaattccactatagttaaactgttggttgaatttgaaaagt
tatcaaacgtttacaaataatgaaggacttgcagaaactctacgattgtg
cttaatctgatcactaatttattttccactgattctatattcctaattac
actaaagaaagctgaaatgctatctgaaaatagcttattttaaagttata
cagtctgactaaaatgctgagataggctaccagagaagagtatttgtgat
catggtctttctgtcaaatcactctatataataccaattgctattgccac
tacttgatatttctttctcttgatggtggaattaaggatacaggagttaa
aattattcccttttaaactattattttaatgtttgatattatatcatttt
ctccatttgtcctctaaatacatccccatcttgctgtcttctcaaaacaa
attcatggcctcctttttatgcataactgatgtcatgcaggcacaaagac
acacacacacaaacaaacactcatacacatactttccagagagagggggg
ggagagggagagat

aattgatcaggctttattcaaacactagcaaagaaggaacatgtattcat
tgctcagattccaaatttgatgtgaagtggtaacaaccttgatttccttg
agaaactctttaaatattaattgagagtaaatgtaagccaataattgagt
gcagaaagtgtgcatatatatgtacatgtatatatatatatatatatata
tatatatatatatatatatatattacatatatgtgtgtgtgtgtatatgt
ataatatatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_53639758_53640621
seq2: B6Ng01-215A08.b_46_909 (reverse)

seq1  ATCTCTCCCTCTCCCCCCCCTCTCTCTGGAAAGTATGTGTATGAGTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCCCTCTCCCCCCCCTCTCTCTGGAAAGTATGTGTATGAGTGTTT  50

seq1  GTTTGTGTGTGTGTGTCTTTGTGCCTGCATGACATCAGTTATGCATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTGTGTGTGTCTTTGTGCCTGCATGACATCAGTTATGCATAAAA  100

seq1  AGGAGGCCATGAATTTGTTTTGAGAAGACAGCAAGATGGGGATGTATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCCATGAATTTGTTTTGAGAAGACAGCAAGATGGGGATGTATTTA  150

seq1  GAGGACAAATGGAGAAAATGATATAATATCAAACATTAAAATAATAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAAATGGAGAAAATGATATAATATCAAACATTAAAATAATAGTTT  200

seq1  AAAAGGGAATAATTTTAACTCCTGTATCCTTAATTCCACCATCAAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGAATAATTTTAACTCCTGTATCCTTAATTCCACCATCAAGAGAA  250

seq1  AGAAATATCAAGTAGTGGCAATAGCAATTGGTATTATATAGAGTGATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATCAAGTAGTGGCAATAGCAATTGGTATTATATAGAGTGATTTG  300

seq1  ACAGAAAGACCATGATCACAAATACTCTTCTCTGGTAGCCTATCTCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGACCATGATCACAAATACTCTTCTCTGGTAGCCTATCTCAGCA  350

seq1  TTTTAGTCAGACTGTATAACTTTAAAATAAGCTATTTTCAGATAGCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTCAGACTGTATAACTTTAAAATAAGCTATTTTCAGATAGCATTT  400

seq1  CAGCTTTCTTTAGTGTAATTAGGAATATAGAATCAGTGGAAAATAAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTCTTTAGTGTAATTAGGAATATAGAATCAGTGGAAAATAAATTA  450

seq1  GTGATCAGATTAAGCACAATCGTAGAGTTTCTGCAAGTCCTTCATTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCAGATTAAGCACAATCGTAGAGTTTCTGCAAGTCCTTCATTATTT  500

seq1  GTAAACGTTTGATAACTTTTCAAATTCAACCAACAGTTTAACTATAGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACGTTTGATAACTTTTCAAATTCAACCAACAGTTTAACTATAGTGG  550

seq1  AATTGCCCCTTGGTCTTGCAAACTTTATATACCTCAGTACAGGAGAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCCCTTGGTCTTGCAAACTTTATATACCTCAGTACAGGAGAATGC  600

seq1  CAGGACCAAGAAGTAGGAGTGGGTGGGTAGGGGAGTGGGGGGGGGTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCAAGAAGTAGGAGTGGGTGGGTAGGGGAGTGGGGGGGGGTTCTG  650

seq1  GGGGACTTTTGGGATAGCATTTGGAATATAAATGAAGAAAATACCTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTTTTGGGATAGCATTTGGAATATAAATGAAGAAAATACCTAATT  700

seq1  AAAAAAATAAATTAAAAAAAAGCAAAAACCTAAAAAAACATGATGGTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAAATTAAAAAAAAGCAAAAACCTAAAAAAACATGATGGTTTA  750

seq1  ATCACCGAAATAAAAGTCTTACTTGAATTCTTATGTGCCCCTCTGCAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCGAAATAAAAGTCTTACTTGAATTCTTATGTGCCCCTCTGCAGCT  800

seq1  ATCTAACCCTAGACTGACCTTGGTAAGTCTTTTCCTCTTGTATGTAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAACCCTAGACTGACCTTGGTAAGTCTTTTCCTCTTGTATGTAAAAT  850

seq1  TGACTACTGAATTC  864
      ||||||||||||||
seq2  TGACTACTGAATTC  864


seq1: chr16_53526198_53526471
seq2: B6Ng01-215A08.g_67_341

seq1  GAATTCAATTGATCAGGCTTTATTCAAACACTAGCAAAGAAGGAACATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTGATCAGGCTTTATTCAAACACTAGCAAAGAAGGAACATGT  50

seq1  ATTCATTGCTCAGATTCCAAATTTGATGTGAAGTGGTAACAACCTTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTGCTCAGATTCCAAATTTGATGTGAAGTGGTAACAACCTTGATT  100

seq1  TCCTTGAGAAACTCTTTAAATATTAATTGAGAGTAAATGTAAGCCAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAGAAACTCTTTAAATATTAATTGAGAGTAAATGTAAGCCAATAA  150

seq1  TTGAGTGCAGAAAGTGTGCATATATATGTACATGTATATATATATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGCAGAAAGTGTGCATATATATGTACATGTATATATATATATATA  200

seq1  TATATATATATATATATATATATATATATTACATATATGTGTGTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATTACATATATGTGTGTGTGTGT  250

seq1  ATATGTAT-ATATATGTATACATAT  274
      |||||||| |||||| |||| ||||
seq2  ATATGTATAATATATATATATATAT  275


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