BAC Information

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BAC

Clone NameB6Ng01-215B22
Chromosome16 (Build37)
Map Location 32,444,967 - 32,445,887
singlet/doubletsinglet
Overlap genePcyt1a
Upstream geneBdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik
Downstream geneOsta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215B22.bB6Ng01-215B22.g
ACCGA032180GA032181
length1,216921
definitionB6Ng01-215B22.b B6Ng01-215B22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgtgc
cggtgatggtaaactctcgtcccgagttttttctcgtcccggaattcggc
accaattgttattagacgcgttctcacgaccggccaggaaagacaccaca
gaccagaatcttctgcggcaaagctttattccttacatcttcaggagcca
gagtgcaagaagcaagagagcaagaagcaagagagagcgagaaaacgaaa
ccccgtccctattaaagagaattctccttcgcctaggacgtgtcactccc
tgattggctgcagcccatcggccgagttgacgtcacggggaaggcagagc
acatggagtgaagaaccaccctcggcacatgcgcagattatttgtttacc
acttagaacacagctgtcagcgccatcttgtaacggcgaatgtgggcgcg
gctcccaacagcgaacatggtggaaagaggaagctagggccctagaaaaa
tgaaatagggctagaagtattaataattcccaggatcacttgctaggtga
aggtcaatatgctaagttacaaaggcaatatgaatgtgatgctatgtgca
ccttgatgctatatttaaatgcttggggcaaggttaaataatcaggaaag
aggtctgaatcatttactaaaattatacatgtcccaaaagaaaccttcac
tgatttcttgcaaagagagatggctcagtggttaagagcactgactattc
ttccagaggtcctgagttcaattctcaggaaccacacggtggctcacaac
tatctgttataggatctaatgccctcttctgggtgtgtcttctggtgtgt
ctagctacagtgtactcatagataacaaataaatacatctttaaaaaaat
aaaaagaatcgtatttgggttcagaaagtcagacaaatatttaattcgga
tctttgggcttttggaaaatgatatttcagaatgtaaaaagggttgatta
gttccctttaaagccagaattccacaccatttagatgaattagaatttag
aaaattatgcctgatgcttaggactcatgttctatggatgcctactctcg
tgacagtaagttacttcccaaggcttaggaaagaaatcaaaaatgcgtgg
gaaatggttttaattc
gaattcattttgaatattacagccttgttggaggaggtatatcattgagt
gggctttgaggtttcaaaagcccattcgaggtccagtttctctttctctt
ccctgtgcctgtgtatcagtgtgtaaagctttcagttattgcttggcaca
gtgcctatccactttttcatgataattgtgaactcaccctcaaaaacttt
aagcaagccccaaatttaatgctttattttataagagttgccttggtcat
gatgtctcttcacagaaatagaactgtaactaagatgctgggtagtggta
gcatatgcctttaatcccagcactctggagacagaggcaggcagatctct
gagttggagcctagtctggtctatggagagagttttaggacagccaggga
tacacagagaaaccttatttctaaaaaagaaagaaagaagaaccgtaaat
aagacaaccaccaatctctctctccagcccctggtagaagggattttaaa
gcaagtaagtatctgggctgagaaacaggagttattaattttacccagat
tacagtgaatctaaggagcaaaggaagcaaggtggaaagatttggaagct
atgcagccagagaaggaacaaaggaacatgatgagaggatgtgtacaaga
agctgagtgctagagagtgatgcttagcattgggataattggaaaaggct
agtgtagctcagaaatcaggctattcctccatcacaggcccagagggctg
gcagaacataattactgcagcaagtgtcttggggaggaattgccttaaat
tcatttccctggtacagactgaccaagcacttggagtctgaggcgtgaat
ctcatgggtctaggtacagcgtgtactttagtgtctatgtgctgagtatg
caggtttgcacaaagcaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32444967_32445887
seq2: B6Ng01-215B22.g_66_986

seq1  GAATTCATTTTGAATATTACAGCCTTGTTGGAGGAGGTATATCATTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTGAATATTACAGCCTTGTTGGAGGAGGTATATCATTGAGT  50

seq1  GGGCTTTGAGGTTTCAAAAGCCCATTCGAGGTCCAGTTTCTCTTTCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTGAGGTTTCAAAAGCCCATTCGAGGTCCAGTTTCTCTTTCTCTT  100

seq1  CCCTGTGCCTGTGTATCAGTGTGTAAAGCTTTCAGTTATTGCTTGGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGCCTGTGTATCAGTGTGTAAAGCTTTCAGTTATTGCTTGGCACA  150

seq1  GTGCCTATCCACTTTTTCATGATAATTGTGAACTCACCCTCAAAAACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTATCCACTTTTTCATGATAATTGTGAACTCACCCTCAAAAACTTT  200

seq1  AAGCAAGCCCCAAATTTAATGCTTTATTTTATAAGAGTTGCCTTGGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGCCCCAAATTTAATGCTTTATTTTATAAGAGTTGCCTTGGTCAT  250

seq1  GATGTCTCTTCACAGAAATAGAACTGTAACTAAGATGCTGGGTAGTGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTCTTCACAGAAATAGAACTGTAACTAAGATGCTGGGTAGTGGTA  300

seq1  GCATATGCCTTTAATCCCAGCACTCTGGAGACAGAGGCAGGCAGATCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGCCTTTAATCCCAGCACTCTGGAGACAGAGGCAGGCAGATCTCT  350

seq1  GAGTTGGAGCCTAGTCTGGTCTATGGAGAGAGTTTTAGGACAGCCAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGAGCCTAGTCTGGTCTATGGAGAGAGTTTTAGGACAGCCAGGGA  400

seq1  TACACAGAGAAACCTTATTTCTAAAAAAGAAAGAAAGAAGAACCGTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGAAACCTTATTTCTAAAAAAGAAAGAAAGAAGAACCGTAAAT  450

seq1  AAGACAACCACCAATCTCTCTCTCCAGCCCCTGGTAGAAGGGATTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAACCACCAATCTCTCTCTCCAGCCCCTGGTAGAAGGGATTTTAAA  500

seq1  GCAAGTAAGTATCTGGGCTGAGAAACAGGAGTTATTAATTTTACCCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTAAGTATCTGGGCTGAGAAACAGGAGTTATTAATTTTACCCAGAT  550

seq1  TACAGTGAATCTAAGGAGCAAAGGAAGCAAGGTGGAAAGATTTGGAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGAATCTAAGGAGCAAAGGAAGCAAGGTGGAAAGATTTGGAAGCT  600

seq1  ATGCAGCCAGAGAAGGAACAAAGGAACATGATGAGAGGATGTGTACAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCCAGAGAAGGAACAAAGGAACATGATGAGAGGATGTGTACAAGA  650

seq1  AGCTGAGTGCTAGAGAGTGATGCTTAGCATTGGGATAATTGGAAAAGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTGCTAGAGAGTGATGCTTAGCATTGGGATAATTGGAAAAGGCT  700

seq1  AGTGTAGCTCAGAAATCAGGCTATTCCTCCATCACAGGCCCAGAGGGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGCTCAGAAATCAGGCTATTCCTCCATCACAGGCCCAGAGGGCTG  750

seq1  GCAGAACAGAATTACTGCAGCAAGTGTCTTGGGGAGGAATTGCCTTAAAT  800
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACATAATTACTGCAGCAAGTGTCTTGGGGAGGAATTGCCTTAAAT  800

seq1  TCATTTCCCTGGTTCAGACTGGCCAAGCACTTGGTGTCTGAGGCGTGAAT  850
      ||||||||||||| ||||||| |||||||||||| |||||||||||||||
seq2  TCATTTCCCTGGTACAGACTGACCAAGCACTTGGAGTCTGAGGCGTGAAT  850

seq1  CACATGGGTCTAGGTACAGCTTGTACTTTAGTGTCTATGTGCTGAGTATG  900
      | |||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTCATGGGTCTAGGTACAGCGTGTACTTTAGTGTCTATGTGCTGAGTATG  900

seq1  CAGGTATGCAGAATGCAAGGG  921
      ||||| |||| || |||||||
seq2  CAGGTTTGCACAAAGCAAGGG  921