BAC Information

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BAC

Clone NameB6Ng01-215I18
Chromosome16 (Build37)
Map Location 27,516,056 - 27,517,128
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043057, Il1rap, Gm606, Ostn, Uts2d, Ccdc50
Downstream geneFgf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215I18.bB6Ng01-215I18.g
ACCGA032478GA032479
length1,0581,075
definitionB6Ng01-215I18.b B6Ng01-215I18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagttctaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttaattataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtgcatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaatttctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccacccaataatc
agcatccaaacgctgacaccattgcataccctagcaagattttatcgaaa
ggacctagatgtagctatctcttgtgagactatgctggggcctagcaaac
acagaagtggatggtcacagtcagctaatggatgggatcacagggctccc
aatggagaagctagagaaagaacccaaggagctaaagggatctgcaaccc
tataggtggaacaacattatgaactaccagtacccggagctcttgacctc
tagctgca
gaattctaattagtgtttcatttttgttcattaatccagtaaaatagttg
gaactgtgcggagatagtttgtgaatgtgtacatttgtaagaatgaaact
ttgaaaatatgtgtgcacagcttaagaatctaaagaaatgcagcaaaaca
aaaacagtcaattcctctcttcccttctgtagcatgtgaaaggaggaaaa
aggatttgtagaaggtatcactgctcatggcagagaatctgtgtaaagtt
attcatatgaaagaaagggacgcttttccagaggacagggtgatgactat
gtgtgactattgctataaaaataaaatgtgatctattatttaaaataaaa
tatgaagtacaaagattaaataccacttcacagaagtcaacttgttctca
agggactcacctattagacagttttgtgttaataaaatatatctgtgtat
tcaaaaggaagtttatagcccacctcactgtctttctaacctcagtgttc
tccaaaggtagctagaagtagaattagttgaaatttcacttatatatcca
ctcacctctatctcataaggacaaaaaaaataaagaaaggaaggaattaa
agaatgaaaggatgaaaagaagaagggagggaggaagaaaaggagagagg
aaggcaaggaaagagggagggaaggagagaatgtatatagtcagttggca
aggcttgccacatttcaaattctctgctgcattattaaattagcttttgc
taatcatataaaatgcatatgtctgtatcactgccctctcccatcccttt
gcctttcacagaagttgttctcaaacatcaaatacatgtctaatgtgacc
aaatccctagaatccagtgttattaattagcagggaacatttttcagacc
acttcacttcctgagaaatggaagatctatgtacctgtgaaatttcacct
gcaaaagttcagagcaatgctcagaaaacctcaccttttctctttgccat
gtaagtactgtgcatgcagcatcatgcttttgtttgctggtttgcttgcc
ttgctgctattgtgaaatgcatagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_27516056_27517128
seq2: B6Ng01-215I18.g_66_1140

seq1  GAATTCTAATTAGTGTTTCATTTTTGTTCATTAATCCAGTAAAATAGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTAGTGTTTCATTTTTGTTCATTAATCCAGTAAAATAGTTG  50

seq1  GAACTGTGCGGAGATAGTTTGTGAATGTGTACATTTGTAAGAATGAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTGCGGAGATAGTTTGTGAATGTGTACATTTGTAAGAATGAAACT  100

seq1  TTGAAAATATGTGTGCACAGCTTAAGAATCTAAAGAAATGCAGCAAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATATGTGTGCACAGCTTAAGAATCTAAAGAAATGCAGCAAAACA  150

seq1  AAAACAGTCAATTCCTCTCTTCCCTTCTGTAGCATGTGAAAGGAGGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGTCAATTCCTCTCTTCCCTTCTGTAGCATGTGAAAGGAGGAAAA  200

seq1  AGGATTTGTAGAAGGTATCACTGCTCATGGCAGAGAATCTGTGTAAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGTAGAAGGTATCACTGCTCATGGCAGAGAATCTGTGTAAAGTT  250

seq1  ATTCATATGAAAGAAAGGGACGCTTTTCCAGAGGACAGGGTGATGACTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATGAAAGAAAGGGACGCTTTTCCAGAGGACAGGGTGATGACTAT  300

seq1  GTGTGACTATTGCTATAAAAATAAAATGTGATCTATTATTTAAAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACTATTGCTATAAAAATAAAATGTGATCTATTATTTAAAATAAAA  350

seq1  TATGAAGTACAAAGATTAAATACCACTTCACAGAAGTCAACTTGTTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGTACAAAGATTAAATACCACTTCACAGAAGTCAACTTGTTCTCA  400

seq1  AGGGACTCACCTATTAGACAGTTTTGTGTTAATAAAATATATCTGTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTCACCTATTAGACAGTTTTGTGTTAATAAAATATATCTGTGTAT  450

seq1  TCAAAAGGAAGTTTATAGCCCACCTCACTGTCTTTCTAACCTCAGTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGGAAGTTTATAGCCCACCTCACTGTCTTTCTAACCTCAGTGTTC  500

seq1  TCCAAAGGTAGCTAGAAGTAGAATTAGTTGAAATTTCACTTATATATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGGTAGCTAGAAGTAGAATTAGTTGAAATTTCACTTATATATCCA  550

seq1  CTCACCTCTATCTCATAAGGACAAAAAAAATAAAGAAAGGAAGGAATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTCTATCTCATAAGGACAAAAAAAATAAAGAAAGGAAGGAATTAA  600

seq1  AGAATGAAAGGATGAAAAGAAGAAGGGAGGGAGGAAGAAAAGGAGAGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAAAGGATGAAAAGAAGAAGGGAGGGAGGAAGAAAAGGAGAGAGG  650

seq1  AAGGCAAGGAAAGAGGGAGGGAAGGAGAGAATGTATATAGTCAGTTGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAGGAAAGAGGGAGGGAAGGAGAGAATGTATATAGTCAGTTGGCA  700

seq1  AGGCTTGCCACATTTCAAATTCTCTGCTGCATTATTAAATTAGCTTTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGCCACATTTCAAATTCTCTGCTGCATTATTAAATTAGCTTTTGC  750

seq1  TAATCATATAAAATGCATATGTCTGTATCACTGCCCTCTCCCATCCCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATATAAAATGCATATGTCTGTATCACTGCCCTCTCCCATCCCTTT  800

seq1  GCC-TTCACAGAAGTTGTTCTCAAACATCAAATACAATGTCTAATGTGAC  849
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCCTTTCACAGAAGTTGTTCTCAAACATCAAATAC-ATGTCTAATGTGAC  849

seq1  CAAAT-CCTAGAATCCAGTGTTATTAATTAGCAGGGAACATTTTCCAGAC  898
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  CAAATCCCTAGAATCCAGTGTTATTAATTAGCAGGGAACATTTTTCAGAC  899

seq1  CACTTCACTTCCTGAGAAATTG-AGATCTATGTACCTGTGAAATTTCA-C  946
      |||||||||||||||||||| | ||||||||||||||||||||||||| |
seq2  CACTTCACTTCCTGAGAAATGGAAGATCTATGTACCTGTGAAATTTCACC  949

seq1  TGCAAAAGTCAGGAGCAATGCTCAGAAAA-CACACC-TTTCTCTTTGCCA  994
      |||||||||   ||||||||||||||||| | |||| |||||||||||||
seq2  TGCAAAAGTTCAGAGCAATGCTCAGAAAACCTCACCTTTTCTCTTTGCCA  999

seq1  TGT-AGTACTGTGCATGCAGCATCATGGTTTTTGTTTGTTTGTTTGCTTG  1043
      ||| |||||||||||||||||||||| | ||||||||| | |||||||||
seq2  TGTAAGTACTGTGCATGCAGCATCAT-GCTTTTGTTTGCTGGTTTGCTTG  1048

seq1  CTTGCTTGCTTAT-TTGTGAAAATGCATAGT  1073
      |   ||||||  | ||||| |||||||||||
seq2  C---CTTGCTGCTATTGTG-AAATGCATAGT  1075