BAC Information

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BAC

Clone NameB6Ng01-216G07
Chromosome16 (Build37)
Map Location 35,618,188 - 35,736,182
singlet/doubletdoublet
Overlap geneSema5b, Dirc2
Upstream geneRopn1, Ccdc14, Mylk, Ptplb, Adcy5, Sec22a, Pdia5, EG546663
Downstream geneHspbap1, Parp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216G07.bB6Ng01-216G07.g
ACCGA033095GA033096
length1,1781,165
definitionB6Ng01-216G07.b B6Ng01-216G07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,734,997 - 35,736,182)(35,618,188 - 35,619,366)
sequence
gaattctacatccagatctacaggcagcaggcagagagagacactgggcc
tggcttgagcatttcaaaccccaaagctcacccctatgatacatttcttt
cagcaaggccacacctcctaatagtgccactccctggtaactaatgcatt
caaatctatgagccatggtcgccattggtattcagaccaccacaccaaag
ttatagcgagttcttagtttggtattggcacagtgagtaaatggtgaact
gagtgtccttggtctccctccagagaaagcgtgtcatttagaaagtcggt
cagctcaccttttcagaatgtcaaattctttatgtgtatgcatatatatc
ttgttgtagttaaactgctgtttggttaatatccttttcatttagaaaat
gcttgcttcaaatgtctcacagacttccaacgtttccaattccaggctaa
tccatgggggacagatactgaacggactggcaggtccgactgtcatgaat
gcggcgccattcctctctacgacgtggttctctgctgacgagcgagccac
tgccacagcaatcgcatcaatgctgagttacctcggtggagcgtgtgcgt
ttctcgtcgggcccctggttgttccagctcccaacgggacggcacccctt
ctcgctgcggagagtagcagggctcatattaaagaccgaatcgagaccgt
gttgtatgcaggtgctttgaagatttttttttcttcttcttgtattcttt
ggtttctattccagtctctgctctctagttctgctgtgccagatcacatc
accagagacccctgaggactgacagatactcgcactcgaatgcactttca
ttatatcttatggatatgcctgtttgaaacaacccttcctaggacagcac
taaatgtaatatgtatacttgctacatggaaaagtcttggttaattttac
attttaactccacttgcaataaagtactctgtagcatatattcttgggat
ttctctagaacatggtgtctaattgtcatgcttaactaaacatttgtcag
catcagtggtagtgttcagctgcttctcccattattggtcacattcttgc
acttattcacccaatcaccggcagttattcctcattgttctccatatgta
gtctataatctaacctgaacttctaaat
gaattcagctccaagggtctgaccagtcagtgatctgcccgttactcacc
ccaggtttggtatggcgccctattttgctgcaacttgaaaatccaaatcg
tgcctttgtcacactctgtcttggctatcagcaccccacatctgagccct
atcccggctctcttgcccctcagaccctgctttgcacccctctcagactc
tccaggccccctaaaacggggcaagaaagaaaaggcaagacaggcgtaca
agcttgtgcaagagcaccagtgaaccccagaacagctccagattctccat
gcagactcctgctgtgtttctgtctgtgtctgtgtgacctgggtatgtgc
tgggtgaacctcagcctccctcaatgtctcagccttctcctggaggccag
gcctctcctcttctctctccccatcatctcctgtacctggatggcagaga
gtcggtgcattgatctagcagttgttcattcagaagagacttgaagaata
aatttacataaaaatcctaataagaatggaacttctgccatagaattggg
gacttcagggcctggagactgtggcagggaggagtctaggatgtgtttct
agcctaggcccccctgactgctagatctaaccacatagagtgccaggcca
aagaatagaagaaggtggtggtcagacctgggcctaagacagggacataa
aggaggggagtgaggttggcaaggtgacaagattatttatgtcccttgtt
ccttgctgtgccaaaatacccaacaaagacaacctatagaaatgattacc
tctgacccacagtttaaatgctacaacacattatggtggcagagacacgg
gcaacttaagcttgttttcctgtgttggcagtgaggaagtagagagctag
acaggaggcaggacttgtcttctgcctttaagcctgcctgtactctctac
agcagtcgcctaggcccatgccaaagtctcatgatcctccagaggagcac
cggggctgatgtttcaaatgttttcaaaagagtgagagatggaggggtga
ataggccttgtcgggttctattgctgtgagagatgccaaggatccagcga
gctcttataaagaacagcactatgagaggctgtcagtccatatcatctat
ggcaagcatgtagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_35734997_35736182
seq2: B6Ng01-216G07.b_45_1222 (reverse)

seq1  ATTTAGAAAGGTCA-GTATGATTAATAGACTAACATATGGAGAACAATGA  49
      |||||| ||| ||| ||  |||| ||||||| ||||||||||||||||||
seq2  ATTTAG-AAGTTCAGGTTAGATT-ATAGACT-ACATATGGAGAACAATGA  47

seq1  AGAATAAACTACAGGTGATTGGGGTGAATAAGGTGCAAGAATGTGACCAA  99
       |||| |||| | ||||||| |||||||||| ||||||||||||||||||
seq2  GGAAT-AACTGCCGGTGATT-GGGTGAATAA-GTGCAAGAATGTGACCAA  94

seq1  TAATGGGAGAAAGCAGGCTGAACACTACCAACTGATGCTTGACAAATGTT  149
      ||||||||| ||||| ||||||||||||| |||||||| |||||||||||
seq2  TAATGGGAG-AAGCA-GCTGAACACTACC-ACTGATGC-TGACAAATGTT  140

seq1  TAGTTAAGCATGACATTTAGACACCATG-TCTAGAGAAATCCCAAGAATA  198
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  TAGTTAAGCATGACAATTAGACACCATGTTCTAGAGAAATCCCAAGAATA  190

seq1  TATGCTACAGAGTACTTTATTGCAAGTGGAGTTAAAATGTAAAATTAACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTACAGAGTACTTTATTGCAAGTGGAGTTAAAATGTAAAATTAACC  240

seq1  AAGACTTTTCCATGTAGCAAGTATACATATTACATTTAGTGCTGTCCTAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTTTCCATGTAGCAAGTATACATATTACATTTAGTGCTGTCCTAG  290

seq1  GAAGGGTTGTTTCAAACAGGCATATCCATAAGATATAATGAAAGTGCATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTTGTTTCAAACAGGCATATCCATAAGATATAATGAAAGTGCATT  340

seq1  CGAGTGCGAGTATCTGTCAGTCCTCAGGGGTCTCTGGTGATGTGATCTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGCGAGTATCTGTCAGTCCTCAGGGGTCTCTGGTGATGTGATCTGG  390

seq1  CACAGCAGAACTAGAGAGCAGAGACTGGAATAGAAACCAAAGAATACAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGAACTAGAGAGCAGAGACTGGAATAGAAACCAAAGAATACAAG  440

seq1  AAGAAGAAAAAAAAATCTTCAAAGCACCTGCATACAACACGGTCTCGATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAAAAAAAATCTTCAAAGCACCTGCATACAACACGGTCTCGATT  490

seq1  CGGTCTTTAATATGAGCCCTGCTACTCTCCGCAGCGAGAAGGGGTGCCGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCTTTAATATGAGCCCTGCTACTCTCCGCAGCGAGAAGGGGTGCCGT  540

seq1  CCCGTTGGGAGCTGGAACAACCAGGGGCCCGACGAGAAACGCACACGCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTTGGGAGCTGGAACAACCAGGGGCCCGACGAGAAACGCACACGCTC  590

seq1  CACCGAGGTAACTCAGCATTGATGCGATTGCTGTGGCAGTGGCTCGCTCG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGAGGTAACTCAGCATTGATGCGATTGCTGTGGCAGTGGCTCGCTCG  640

seq1  TCAGCAGAGAACCACGTCGTAGAGAGGAATGGCGCCGCATTCATGACAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGAGAACCACGTCGTAGAGAGGAATGGCGCCGCATTCATGACAGT  690

seq1  CGGACCTGCCAGTCCGTTCAGTATCTGTCCCCCATGGATTAGCCTGGAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACCTGCCAGTCCGTTCAGTATCTGTCCCCCATGGATTAGCCTGGAAT  740

seq1  TGGAAACGTTGGAAGTCTGTGAGACATTTGAAGCAAGCATTTTCTAAATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACGTTGGAAGTCTGTGAGACATTTGAAGCAAGCATTTTCTAAATG  790

seq1  AAAAGGATATTAACCAAACAGCAGTTTAACTACAACAAGATATATATGCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGATATTAACCAAACAGCAGTTTAACTACAACAAGATATATATGCA  840

seq1  TACACATAAAGAATTTGACATTCTGAAAAGGTGAGCTGACCGACTTTCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATAAAGAATTTGACATTCTGAAAAGGTGAGCTGACCGACTTTCTA  890

seq1  AATGACACGCTTTCTCTGGAGGGAGACCAAGGACACTCAGTTCACCATTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACACGCTTTCTCTGGAGGGAGACCAAGGACACTCAGTTCACCATTT  940

seq1  ACTCACTGTGCCAATACCAAACTAAGAACTCGCTATAACTTTGGTGTGGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTGTGCCAATACCAAACTAAGAACTCGCTATAACTTTGGTGTGGT  990

seq1  GGTCTGAATACCAATGGCGACCATGGCTCATAGATTTGAATGCATTAGTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGAATACCAATGGCGACCATGGCTCATAGATTTGAATGCATTAGTT  1040

seq1  ACCAGGGAGTGGCACTATTAGGAGGTGTGGCCTTGCTGAAAGAAATGTAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGAGTGGCACTATTAGGAGGTGTGGCCTTGCTGAAAGAAATGTAT  1090

seq1  CATAGGGGTGAGCTTTGGGGTTTGAAATGCTCAAGCCAGGCCCAGTGTCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGGGTGAGCTTTGGGGTTTGAAATGCTCAAGCCAGGCCCAGTGTCT  1140

seq1  CTCTCTGCCTGCTGCCTGTAGATCTGGATGTAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGCCTGCTGCCTGTAGATCTGGATGTAGAATTC  1178

seq1: chr16_35618188_35619366
seq2: B6Ng01-216G07.g_65_1229

seq1  GAATTCAGCTCCAAGGGTCTGACCAGTCAGTGATCTGCCCGTTACTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCCAAGGGTCTGACCAGTCAGTGATCTGCCCGTTACTCACC  50

seq1  CCAGGTTTGGTATGGCGCCCTATTTTGCTGCAACTTGAAAATCCAAATCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTTGGTATGGCGCCCTATTTTGCTGCAACTTGAAAATCCAAATCG  100

seq1  TGCCTTTGTCACACTCTGTCTTGGCTATCAGCACCCCACATCTGAGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGTCACACTCTGTCTTGGCTATCAGCACCCCACATCTGAGCCCT  150

seq1  ATCCCGGCTCTCTTGCCCCTCAGACCCTGCTTTGCACCCCTCTCAGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCGGCTCTCTTGCCCCTCAGACCCTGCTTTGCACCCCTCTCAGACTC  200

seq1  TCCAGGCCCCCTAAAACGGGGCAAGAAAGAAAAGGCAAGACAGGCGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCCCCCTAAAACGGGGCAAGAAAGAAAAGGCAAGACAGGCGTACA  250

seq1  AGCTTGTGCAAGAGCACCAGTGAACCCCAGAACAGCTCCAGATTCTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTGCAAGAGCACCAGTGAACCCCAGAACAGCTCCAGATTCTCCAT  300

seq1  GCAGACTCCTGCTGTGTTTCTGTCTGTGTCTGTGTGACCTGGGTATGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTCCTGCTGTGTTTCTGTCTGTGTCTGTGTGACCTGGGTATGTGC  350

seq1  TGGGTGAACCTCAGCCTCCCTCAATGTCTCAGCCTTCTCCTGGAGGCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGAACCTCAGCCTCCCTCAATGTCTCAGCCTTCTCCTGGAGGCCAG  400

seq1  GCCTCTCCTCTTCTCTCTCCCCATCATCTCCTGTACCTGGATGGCAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCCTCTTCTCTCTCCCCATCATCTCCTGTACCTGGATGGCAGAGA  450

seq1  GTCGGTGCATTGATCTAGCAGTTGTTCATTCAGAAGAGACTTGAAGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGTGCATTGATCTAGCAGTTGTTCATTCAGAAGAGACTTGAAGAATA  500

seq1  AATTTACATAAAAATCCTAATAAGAATGGAACTTCTGCCATAGAATTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACATAAAAATCCTAATAAGAATGGAACTTCTGCCATAGAATTGGG  550

seq1  GACTTCAGGGCCTGGAGACTGTGGCAGGGAGGAGTCTAGGATGTGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAGGGCCTGGAGACTGTGGCAGGGAGGAGTCTAGGATGTGTTTCT  600

seq1  AGCCTAGGCCCCCCTGACTGCTAGATCTAACCACATAGAGTGCCAGGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGGCCCCCCTGACTGCTAGATCTAACCACATAGAGTGCCAGGCCA  650

seq1  AAGAATAGAAGAAGGTGGTGGTCAGACCTGGGCCTAAGACAGGGACATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAGAAGAAGGTGGTGGTCAGACCTGGGCCTAAGACAGGGACATAA  700

seq1  AGGAGGGGAGTGAGGTTGGCAAGGTGACAAGATTATTTATGTCCCTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGGAGTGAGGTTGGCAAGGTGACAAGATTATTTATGTCCCTTGTT  750

seq1  CCTTGCTGTGCCAAAATACCCAACAAAGACAACCTATAGAAATGATTACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTGTGCCAAAATACCCAACAAAGACAACCTATAGAAATGATTACC  800

seq1  TCTGACCCACAGTTTAAATGCTACAACACATTATGGTGGCAGAGACACGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCCACAGTTTAAATGCTACAACACATTATGGTGGCAGAGACACGG  850

seq1  GCAACTTAAGCTTGTTTTCCTGTGTTGGCAGTGAGGAAGTAGAGAGCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTAAGCTTGTTTTCCTGTGTTGGCAGTGAGGAAGTAGAGAGCTAG  900

seq1  ACAGGAGGCAGGACTTGTCTTCTGCCTTTAAGCCCTGCCCTGTACTCTCC  950
      |||||||||||||||||||||||||||||||| |||| |||||||||| |
seq2  ACAGGAGGCAGGACTTGTCTTCTGCCTTTAAG-CCTG-CCTGTACTCT-C  947

seq1  TACAGCAGTCGCCTAGGCCCCATGCCCAAAAGGTCTCATGATCCCCCAGA  1000
      ||||||||||||||||| ||||||||   || |||||||||||| |||||
seq2  TACAGCAGTCGCCTAGG-CCCATGCC---AAAGTCTCATGATCCTCCAGA  993

seq1  -GAGCACCGGGGCTGAATGTTTCAAAATGTTTCAAAAAGAGTGAAGAGAT  1049
       |||||||||||||| ||||||| ||||||||  ||||||||| ||||||
seq2  GGAGCACCGGGGCTG-ATGTTTC-AAATGTTTTCAAAAGAGTG-AGAGAT  1040

seq1  GGAGGGGTG-ATAGGCCTTGTCGGTGTTCTATTGCTGTGAAGAGATGCC-  1097
      ||||||||| |||||||||||||| |||||||||||||| ||||||||| 
seq2  GGAGGGGTGAATAGGCCTTGTCGG-GTTCTATTGCTGTG-AGAGATGCCA  1088

seq1  AGGAT-CAGC-AGCTCTTATAAAAGACAGCATTTAATTGAGGCTGGTTCA  1145
      ||||| |||| ||||||||||||  ||||||  ||   |||||||  |||
seq2  AGGATCCAGCGAGCTCTTATAAAGAACAGCA-CTATGAGAGGCTG--TCA  1135

seq1  GTCCATTATCATC-ATGGCAGAAAGCATGGTAGTG  1179
      ||||| ||||||| |||||   |||||| ||||||
seq2  GTCCA-TATCATCTATGGC---AAGCAT-GTAGTG  1165