BAC Information

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BAC

Clone NameB6Ng01-216P24
Chromosome16 (Build37)
Map Location 73,290,537 - 73,404,373
singlet/doubletdoublet
Overlap geneLOC100039326
Upstream geneRobo1, LOC100039310, LOC100039318
Downstream geneRobo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216P24.bB6Ng01-216P24.g
ACCGA033537GA033538
length1,066175
definitionB6Ng01-216P24.b B6Ng01-216P24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,290,537 - 73,291,588)(73,404,199 - 73,404,373)
sequence
gaattcttccccatgcacatagagcatcacctgcatcttttaaaatttat
ttattcacttagcatctaaatatccacaccccctctctttcaagtgcccc
cctcaaagctctcctccactccccctttcccttctcacagaaggtagtgt
cttctgccttaccccattctccctccccacagctatctaggactaggtgc
attctctctcactgaggccagacaagtggcccagttaggggaatgggatc
cataggcaggccacaaattcagggacagctctcactccagttgggggacc
tgcatgaatattaagctgtacaaccactacatatatgtccgggtgtgaag
gctaagttcagtccatgcttgctctttggttggcatcaccagcatgttag
cctaagtcaatagaatatatttaatcccccaattccatcctactccccaa
gggtcacatagtccctccacatggaataaagctcacaaaatatttcacta
aggatcctcttagatgggctgtttttattgagctgtaatacttggggaga
atatcccctgaagcagtcatcattggaccttggacctgcctgccttccca
ggctctcatttgctcatagaggctcacttcagatcagagtgctggcttcc
aacatcactgctgcaactgcactgggaccctcgcctcgctccactttgcc
tagcctcacctcgccacttcctccttcccctccctctctcccctcctttc
ttttctacccacatttgtggtgatgggggacaatattcagagtctaagta
tgccctaaagactttgcctataggcccatctaatgaaaggcattttcaca
gctaaaatttccctcatctctgatatgactaggtttgtcctattattgaa
caaaacacaaccagcatacctagtagttgggtgttggagactacattttt
ctagtatctcttgattattttgtgagctctttggagtgggagttgtctat
tttaattttgttgcccatttagaacttcagtttgttgcttgttaaggttt
ggtagatccttctttg

acatattcattgcttgtgccattcagtctccggtgtgcatctacagaaaa
tccgcaaaatcagttcagttcccatcctttggtaagatagctgagactga
atgtcacattgcactatttgttaacgcttatagtatttatatgagtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_73290537_73291588
seq2: B6Ng01-216P24.b_42_1107

seq1  GAATTCTTCCCCATGCACATAGAGCATCACCTGCATCTTTTAAAATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCCATGCACATAGAGCATCACCTGCATCTTTTAAAATTTAT  50

seq1  TTATTCACTTAGCATCTAAATATCCACACCCCCTCTCTTTCAAGTGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCACTTAGCATCTAAATATCCACACCCCCTCTCTTTCAAGTGCCCC  100

seq1  CCTCAAAGCTCTCCTCCACTCCCCCTTTCCCTTCTCACAGAAGGTAGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAGCTCTCCTCCACTCCCCCTTTCCCTTCTCACAGAAGGTAGTGT  150

seq1  CTTCTGCCTTACCCCATTCTCCCTCCCCACAGCTATCTAGGACTAGGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCCTTACCCCATTCTCCCTCCCCACAGCTATCTAGGACTAGGTGC  200

seq1  ATTCTCTCTCACTGAGGCCAGACAAGTGGCCCAGTTAGGGGAATGGGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCTCACTGAGGCCAGACAAGTGGCCCAGTTAGGGGAATGGGATC  250

seq1  CATAGGCAGGCCACAAATTCAGGGACAGCTCTCACTCCAGTTGGGGGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCAGGCCACAAATTCAGGGACAGCTCTCACTCCAGTTGGGGGACC  300

seq1  TGCATGAATATTAAGCTGTACAACCACTACATATATGTCCGGGTGTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAATATTAAGCTGTACAACCACTACATATATGTCCGGGTGTGAAG  350

seq1  GCTAAGTTCAGTCCATGCTTGCTCTTTGGTTGGCATCACCAGCATGTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGTTCAGTCCATGCTTGCTCTTTGGTTGGCATCACCAGCATGTTAG  400

seq1  CCTAAGTCAATAGAATATATTTAATCCCCCAATTCCATCCTACTCCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTCAATAGAATATATTTAATCCCCCAATTCCATCCTACTCCCCAA  450

seq1  GGGTCACATAGTCCCTCCACATGGAATAAAGCTCACAAAATATTTCACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACATAGTCCCTCCACATGGAATAAAGCTCACAAAATATTTCACTA  500

seq1  AGGATCCTCTTAGATGGGCTGTTTTTATTGAGCTGTAATACTTGGGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCTCTTAGATGGGCTGTTTTTATTGAGCTGTAATACTTGGGGAGA  550

seq1  ATATCCCCTGAAGCAGTCATCATTGGACCTTGGACCTGCCTGCCTTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCCTGAAGCAGTCATCATTGGACCTTGGACCTGCCTGCCTTCCCA  600

seq1  GGCTCTCATTTGCTCATAGAGGCTCACTTCAGATCAGAGTGCTGGCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCATTTGCTCATAGAGGCTCACTTCAGATCAGAGTGCTGGCTTCC  650

seq1  AACATCACTGCTGCAACTGCACTGGGACCCTCGCCTCGCTCCACTTTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCACTGCTGCAACTGCACTGGGACCCTCGCCTCGCTCCACTTTGCC  700

seq1  TAGCCTCACCTCGCCACTTCCTCCTTCCCCTCCCTCTCTCCCCTCCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCACCTCGCCACTTCCTCCTTCCCCTCCCTCTCTCCCCTCCTTTC  750

seq1  TTTTCTACCCACATTTGTGGTGATGGGGGACAATATTCAGAGTCTAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACCCACATTTGTGGTGATGGGGGACAATATTCAGAGTCTAAGTA  800

seq1  TGCCCTAAAGAC-TTGCCTATAGGCCCATCTAATG-AAGGCATTTTCACA  848
      |||||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  TGCCCTAAAGACTTTGCCTATAGGCCCATCTAATGAAAGGCATTTTCACA  850

seq1  GCTAAAA-TTCCCTCATCTCTGATATGACTAGGTTTGTCCTA-TATTG-A  895
      ||||||| |||||||||||||||||||||||||||||||||| ||||| |
seq2  GCTAAAATTTCCCTCATCTCTGATATGACTAGGTTTGTCCTATTATTGAA  900

seq1  CAAAACACAACCAGCATACCTAGTAGTT-GGTGTTGGAGACTACA-TTTT  943
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  CAAAACACAACCAGCATACCTAGTAGTTGGGTGTTGGAGACTACATTTTT  950

seq1  CTAGTATCTCTTGAT--ATTTGTGAGCTCTTTGGAGTGGGAG-TGTCTAT  990
      |||||||||||||||   |||||||||||||||||||||||| |||||||
seq2  CTAGTATCTCTTGATTATTTTGTGAGCTCTTTGGAGTGGGAGTTGTCTAT  1000

seq1  TT--AATTTGTTGCCCATTTAGAACTTCAGTTTGTTGC-TGTTAAGGTTT  1037
      ||  | |||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTAATTTTGTTGCCCATTTAGAACTTCAGTTTGTTGCTTGTTAAGGTTT  1050

seq1  TGTAGATCC-TCTTTG  1052
       |||||||| ||||||
seq2  GGTAGATCCTTCTTTG  1066


seq1: chr16_73404199_73404373
seq2: B6Ng01-216P24.g_71_245 (reverse)

seq1  CACACACACACACACACACACACACACACACTCATATAAATACTATAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACTCATATAAATACTATAAGC  50

seq1  GTTAACAAATAGTGCAATGTGACATTCAGTCTCAGCTATCTTACCAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACAAATAGTGCAATGTGACATTCAGTCTCAGCTATCTTACCAAAGG  100

seq1  ATGGGAACTGAACTGATTTTGCGGATTTTCTGTAGATGCACACCGGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAACTGAACTGATTTTGCGGATTTTCTGTAGATGCACACCGGAGAC  150

seq1  TGAATGGCACAAGCAATGAATATGT  175
      |||||||||||||||||||||||||
seq2  TGAATGGCACAAGCAATGAATATGT  175


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