BAC Information

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BAC

Clone NameB6Ng01-219A08
Chromosome16 (Build37)
Map Location 33,351,593 - 33,504,979
singlet/doubletdoublet
Overlap geneZfp148
Upstream geneUbxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4
Downstream geneSlc12a8, 4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn, LOC100043670
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219A08.bB6Ng01-219A08.g
ACCGA034985GA034986
length3921,088
definitionB6Ng01-219A08.b B6Ng01-219A08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,351,593 - 33,351,988)(33,503,914 - 33,504,979)
sequence
cagtacagctagggctacacagaaaaatcctgtcttgacaaaaccaaaat
aaataaataaattaaagtatttgagtaagtgtgatggtttgaataggttt
ggcctccatagacttgtgtgtttgaatgcttggctcacagaaagtggcac
tcttaggaggtgtgcccttgttgaaggaagtgtgtcactaggtaggtggg
ctttgaggtcctatgctcacgctccagccagtgtagaagaaagcctctcc
tttggatcaagatgtagaactctcagctccatctccagcaccatatctgc
ctggacgctgaaggcttcccaccatgatgataataatggacttgaacctc
ttaaactgaaagccagtcctactgaaatagttattctttata
gaattcaacctcaagtgtgcagcacagtaccaacacatccttacactcag
ggtttgccttaaccataccaagtacaacactgtgacatgtaatctgttgc
tgataccacaatgctttcagattaagatgctagcagccaagctggctcaa
tggctaaatagccctggctgctcttccagaggatccgggtttgattcctg
ccacacaagcccctgtactggcagctgcagaggattgggtgccctcttca
gtgcttgctcagctctcactcacatggtacacagacacatatgtaggcaa
gacacatacatcagtcttcctttaaaaaaaagatactggcagcttcagtc
atctactgtttgcacttagcatagtgtctggtaagtaggtgatgagtgct
gaatgtagggtgaaggttctgagcccagccaatgaagatccaagtcatca
ggaaacgccaagtcctatcccagggaacgctctccctaggctcccttccc
cacaagggaacagctgtttcagctttaaggacatgagaagttacaaacag
taaggttacaactttaaaagctcatctgtgtgagtaaacaggcaaaggtc
caaaggttcaaattttacaagttttaacccgccttttcccccagcacttg
aaaatgccattcttatttagtgtcattttcccccattccattccttacat
aggcatgtgtatatatctgcctaagtctatggataaaaggttttgtcctg
attgcccattctatcttaaaatgaccggggtggggtgtgggagactccca
tttttcactttcacttcacttttggctccagtgtctctttgatgcaggag
gtggatgttgttttatcctaattattcatcagaattcagcaattaatcag
agggactgaacagctggggaatcgttattctatccagacactgatcagga
aaatcatttttggtgaggtgatgaaattgccaaagtagaacttcaggtga
acaacactttaaattcaggtgactttcaaattttatttttcatagaatct
ttcgaagggtggggagaacgggctaggtagaaatctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_33351593_33351988
seq2: B6Ng01-219A08.b_45_442

seq1  GAATTCCAGTACAGCTAGGGCTACACAGAAAAATCCTGTCTTGACAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTACAGCTAGGGCTACACAGAAAAATCCTGTCTTGACAAAAC  50

seq1  CAAAATAAATAAATAAATTAAAGTATTTGAGTAAGTGTGATGGTTTGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAATAAATAAATTAAAGTATTTGAGTAAGTGTGATGGTTTGAAT  100

seq1  AGGTTTGGCCTCCATAGACTTGTGTGTTTGAATGCTTGGCTCACAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGGCCTCCATAGACTTGTGTGTTTGAATGCTTGGCTCACAGAAAG  150

seq1  TGGCACTCTTAGGAGGTGTGCCCTTGTTGAAGGAAGTGTGTCACTAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTCTTAGGAGGTGTGCCCTTGTTGAAGGAAGTGTGTCACTAGGTA  200

seq1  GGTGGGCTTTGAGGTCCTATGCTCACGCTCCAGCCAGTGTAGAAGAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCTTTGAGGTCCTATGCTCACGCTCCAGCCAGTGTAGAAGAAAGC  250

seq1  CTCTCCTTTGGATCAAGATGTAGAACTCTCAGCTCCATCTCCAGCACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTTGGATCAAGATGTAGAACTCTCAGCTCCATCTCCAGCACCAT  300

seq1  ATCTGCCTGGACGCTGAAGGCTTCCCACCATGATGATAATAATGGAC-TG  349
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATCTGCCTGGACGCTGAAGGCTTCCCACCATGATGATAATAATGGACTTG  350

seq1  AACCTCTGAAACTGTAAGCCAGCCCTACTGAAATAGTT-TTCTTTATA  396
      ||||||| |||||| ||||||| ||||||||||||||| |||||||||
seq2  AACCTCTTAAACTGAAAGCCAGTCCTACTGAAATAGTTATTCTTTATA  398

seq1: chr16_33503914_33504979
seq2: B6Ng01-219A08.g_69_1156 (reverse)

seq1  GGAGATTTCTACCT-GACACTTCTCCC--ACCTTCTGAAGATTCTATGAA  47
      |||||||||||||| | |  |||||||   |||||  |||||||||||||
seq2  GGAGATTTCTACCTAGCCCGTTCTCCCCACCCTTCGAAAGATTCTATGAA  50

seq1  AAAATAAAATTG-AAGTCACTTGAA-TTAATGTGTTG-TCA-CTG-AGTC  92
      |||  ||| ||| ||||||| |||| |||| |||||| ||| ||| ||| 
seq2  AAATAAAATTTGAAAGTCACCTGAATTTAAAGTGTTGTTCACCTGAAGTT  100

seq1  TTAC-TTGACAA-TTCATCA-CTCAC--AAAATGATTTTCCTGATCAGTG  137
       ||| ||| ||| ||||||| |||||  ||||||||||||||||||||||
seq2  CTACTTTGGCAATTTCATCACCTCACCAAAAATGATTTTCCTGATCAGTG  150

seq1  TCTGGATAG-ATTACGCTT-CCCAGCTGTTCAGT-CCTCTGATTAATTGC  184
      ||||||||| || ||| || |||||||||||||| |||||||||||||||
seq2  TCTGGATAGAATAACGATTCCCCAGCTGTTCAGTCCCTCTGATTAATTGC  200

seq1  TGAA-TCTGATGAAT-ATTAGGAT-AAACAACATCCACTTCCTGCATC-A  230
      |||| |||||||||| |||||||| ||||||||||||| ||||||||| |
seq2  TGAATTCTGATGAATAATTAGGATAAAACAACATCCACCTCCTGCATCAA  250

seq1  AGAGACACTGGAGGCCAAAGTGAAGTG-AAGTG-AAAATGGGAGTCTCCC  278
      ||||||||||||| | ||||||||||| ||||| ||||||||||||||||
seq2  AGAGACACTGGAGCCAAAAGTGAAGTGAAAGTGAAAAATGGGAGTCTCCC  300

seq1  ACACCCCACCCCGGTCATTTTAAGATAGAATGGGCAATCAGGACAAAACC  328
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCACCCCGGTCATTTTAAGATAGAATGGGCAATCAGGACAAAACC  350

seq1  TTTTATCCATAGACTTAGGCAGATATATACACATGCCTATGTAAGGAATG  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCCATAGACTTAGGCAGATATATACACATGCCTATGTAAGGAATG  400

seq1  GAATGGGGGAAAATGACACTAAATAAGAATGGCATTTTCAAGTGCTGGGG  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGGGAAAATGACACTAAATAAGAATGGCATTTTCAAGTGCTGGGG  450

seq1  GAAAAGGCGGGTTAAAACTTGTAAAATTTGAACCTTTGGACCTTTGCCTG  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCGGGTTAAAACTTGTAAAATTTGAACCTTTGGACCTTTGCCTG  500

seq1  TTTACTCACACAGATGAGCTTTTAAAGTTGTAACCTTACTGTTTGTAACT  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCACACAGATGAGCTTTTAAAGTTGTAACCTTACTGTTTGTAACT  550

seq1  TCTCATGTCCTTAAAGCTGAAACAGCTGTTCCCTTGTGGGGAAGGGAGCC  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTCCTTAAAGCTGAAACAGCTGTTCCCTTGTGGGGAAGGGAGCC  600

seq1  TAGGGAGAGCGTTCCCTGGGATAGGACTTGGCGTTTCCTGATGACTTGGA  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGAGCGTTCCCTGGGATAGGACTTGGCGTTTCCTGATGACTTGGA  650

seq1  TCTTCATTGGCTGGGCTCAGAACCTTCACCCTACATTCAGCACTCATCAC  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTGGCTGGGCTCAGAACCTTCACCCTACATTCAGCACTCATCAC  700

seq1  CTACTTACCAGACACTATGCTAAGTGCAAACAGTAGATGACTGAAGCTGC  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTACCAGACACTATGCTAAGTGCAAACAGTAGATGACTGAAGCTGC  750

seq1  CAGTATCTTTTTTTTAAAGGAAGACTGATGTATGTGTCTTGCCTACATAT  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCTTTTTTTTAAAGGAAGACTGATGTATGTGTCTTGCCTACATAT  800

seq1  GTGTCTGTGTACCATGTGAGTGAGAGCTGAGCAAGCACTGAAGAGGGCAC  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGTGTACCATGTGAGTGAGAGCTGAGCAAGCACTGAAGAGGGCAC  850

seq1  CCAATCCTCTGCAGCTGCCAGTACAGGGGCTTGTGTGGCAGGAATCAAAC  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCCTCTGCAGCTGCCAGTACAGGGGCTTGTGTGGCAGGAATCAAAC  900

seq1  CCGGATCCTCTGGAAGAGCAGCCAGGGCTATTTAGCCATTGAGCCAGCTT  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGATCCTCTGGAAGAGCAGCCAGGGCTATTTAGCCATTGAGCCAGCTT  950

seq1  GGCTGCTAGCATCTTAATCTGAAAGCATTGTGGTATCAGCAACAGATTAC  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTAGCATCTTAATCTGAAAGCATTGTGGTATCAGCAACAGATTAC  1000

seq1  ATGTCACAGTGTTGTACTTGGTATGGTTAAGGCAAACCCTGAGTGTAAGG  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACAGTGTTGTACTTGGTATGGTTAAGGCAAACCCTGAGTGTAAGG  1050

seq1  ATGTGTTGGTACTGTGCTGCACACTTGAGGTTGAATTC  1066
      ||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTGGTACTGTGCTGCACACTTGAGGTTGAATTC  1088