BAC Information

Click to search

BAC

Clone NameB6Ng01-221G09
Chromosome16 (Build37)
Map Location 61,077,756 - 61,078,842
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha6, LOC100043804, EG668168, LOC668170
Downstream geneLOC100043524, LOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221G09.b
ACCGA036704
length1,107
definitionB6Ng01-221G09.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaatggccttgatcggaaatcgatgttttcttctgcattaattc
tatgtcccttttgctttgttacttttagtatattattctttttatatttg
ttttgattcttaacaaaactatagaaatgtacagtttcctttatccttgg
aaccttgcatatgcacagctgttatattataagcattatcctgcaaaaac
ggcacacttatagcaactgatagagttataatgacaaattattttagcca
aaatttatgcttctactgaagacataatcactgaatacaataagatagct
acatataaatgtacactaatattgacaattaatttttatgaaaaatagtt
ctttcccccaaatgatgccaagtacattggatgtaacattaaagataaaa
ctcactaaccaaataattgtccagctattttttattaaaaataaattcct
gctttgcaaataacaatattaagggactgagaggagctaagtcaacgaat
tgaataagatactacgaaacaaaatgtacaaaatggccattacacaaaat
atagaaagagttcaataatcagttttaaacaattattttcaaaatgtgtt
cctaggtttttttatacatgcatatattcatattgcatactactagacat
actatatataaatatgttttgttaaatataataaaagatgcaaacaacct
gaaatttggaaggcagatgggtttatctttttttcccttgcatttctttt
attttgcaattatcatatactacatcccccttcccttttctttctctata
ccctaggatatattatattcattgaaaatggatttttataatatagtata
ttctcattagagcatcctttcccctgagtcctcctaagacttctacatta
ctcccccttcccccaaatcagaaatatactctttctgtgtttctctagta
aagaaacagaattatttgagtaattataacaaacaaacaatcaacaaaaa
gcccacctccagcagaatggcagcacattcaagtggaggaatgggagttg
cccatcccacaggtcacaactctgaccataaattcttcctgtttttaaaa
aaattac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61077756_61078842
seq2: B6Ng01-221G09.b_55_1147

seq1  TTGATCTGAAATCATATGTTTTCTTCTGCATTAATTCTATGTCCCTTTTG  50
      |||||| ||||||  |||||||||||||||||||||||||||||||||||
seq2  TTGATCGGAAATC-GATGTTTTCTTCTGCATTAATTCTATGTCCCTTTTG  49

seq1  CTTTGTTACTTTTAGTATATTATTCTTTTTAGATTTGTTTTGATTCAGAA  100
      ||||||||||||||||||||||||||||||| ||||||||||||||  ||
seq2  CTTTGTTACTTTTAGTATATTATTCTTTTTATATTTGTTTTGATTCTTAA  99

seq1  CAAAACTATAGAAATGTACAGTTTCCTTTATCCTTGGAACCTTGCATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTATAGAAATGTACAGTTTCCTTTATCCTTGGAACCTTGCATATG  149

seq1  CACAGCTGTTATATTATAAGCATTATCCTGCAAAAGCAGCACACTTATAG  200
      ||||||||||||||||||||||||||||||||||| | ||||||||||||
seq2  CACAGCTGTTATATTATAAGCATTATCCTGCAAAAACGGCACACTTATAG  199

seq1  CAACTGATAGAGTTATAATGACAAATTATTTTAGCCAAAATTTATGCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGATAGAGTTATAATGACAAATTATTTTAGCCAAAATTTATGCTTC  249

seq1  TACTGAAGACATAATCACTGAATACAATAAGATAGCTACATATAAATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAGACATAATCACTGAATACAATAAGATAGCTACATATAAATGTA  299

seq1  CACTAATATTGACAATTAATTTTTATGAAAAATAGTTCTTTCCCCCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATATTGACAATTAATTTTTATGAAAAATAGTTCTTTCCCCCAAAT  349

seq1  GATGCCAAGTACATTGGATGTAACATTAAAGATAAAACTCACTAACCAGA  400
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GATGCCAAGTACATTGGATGTAACATTAAAGATAAAACTCACTAACCAAA  399

seq1  TAATTGTCCAGCTATTTTTTATTAAAAATAAATTCCTGCTTTGCAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTCCAGCTATTTTTTATTAAAAATAAATTCCTGCTTTGCAAATAA  449

seq1  CAATATTAAGGGACTGAGAGGAGCTAAGTCAACGAATTGAATAAGATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTAAGGGACTGAGAGGAGCTAAGTCAACGAATTGAATAAGATACT  499

seq1  ACGAAACAAAATGTACAAAATGGCCATTACACAAAATATAGAAAGAGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAACAAAATGTACAAAATGGCCATTACACAAAATATAGAAAGAGTTC  549

seq1  AATAATCAGTTTTAAACAATTATTTTCAAAATGTGTTCCTAGGTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAGTTTTAAACAATTATTTTCAAAATGTGTTCCTAGGTTTTTTT  599

seq1  ATACATGCATATATTCATATTGCATACTACTAGACATACTATATATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGCATATATTCATATTGCATACTACTAGACATACTATATATAAAT  649

seq1  ATG-TTTGTTAAATATAATAAAAGATGCAAACAACCTGAAATTTGGAAGG  699
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTGTTAAATATAATAAAAGATGCAAACAACCTGAAATTTGGAAGG  699

seq1  CAGATGGGTTTATCTTTTTTTCCCTTGCATTTCTTTTATTTTGCAATTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGGTTTATCTTTTTTTCCCTTGCATTTCTTTTATTTTGCAATTAT  749

seq1  CATATACTACATCCCCCTTCCCTTTTCTTTCTCTATACCCTAGGATATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTACATCCCCCTTCCCTTTTCTTTCTCTATACCCTAGGATATAT  799

seq1  TATATTCATTGAAAATGGATTTTTATAATATAGTATATTCTCATTAGAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCATTGAAAATGGATTTTTATAATATAGTATATTCTCATTAGAGC  849

seq1  ATCCTTTCCCCTGAGTCCTCCTAAGACTTCTACATTACTCCCCCTCCCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATCCTTTCCCCTGAGTCCTCCTAAGACTTCTACATTACTCCCCCTTCCCC  899

seq1  CAAATCAGGAAATATACTCTTTCTGTGTTTCTCTAGTAAAGAAACAGAAA  949
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  CAAATCA-GAAATATACTCTTTCTGTGTTTCTCTAGTAAAGAAACAGAAT  948

seq1  TA-TTGAGTAATTATAACAAAACAAACAATCAAACAAAAAGCCCACCTCC  998
      || ||||||||||||||| |||||||||||| ||||||||||||||||||
seq2  TATTTGAGTAATTATAAC-AAACAAACAATC-AACAAAAAGCCCACCTCC  996

seq1  AGCAGAATGGCAGCACA-TCAAGT-GAGGGAT-GGAGTTG-CCATCCCAC  1044
      ||||||||||||||||| |||||| |||| || ||||||| |||||||||
seq2  AGCAGAATGGCAGCACATTCAAGTGGAGGAATGGGAGTTGCCCATCCCAC  1046

seq1  A-GTCACAACTCTGACCAT-AATTCTTCCTG--TTTAAAAAAATTAC  1087
      | ||||||||||||||||| |||||||||||  ||||||||||||||
seq2  AGGTCACAACTCTGACCATAAATTCTTCCTGTTTTTAAAAAAATTAC  1093